RNA–Protein interactions for RNA: ENST00000374884.2

SPIN4-201, Transcript of spindlin family member 4, humanhuman

APPRIS P1 BASIC

Gene SPIN4, Length 4,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4-201ENST00000374884 PTPRKQ15262 1439 aa11.85□□□□□ -0.51
SPIN4-201ENST00000374884 GOLGA6L4A6NEF3 574 aa11.85□□□□□ -0.51
SPIN4-201ENST00000374884 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPIN4-201ENST00000374884 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
SPIN4-201ENST00000374884 RNF123Q5XPI4 1314 aa11.85□□□□□ -0.51
SPIN4-201ENST00000374884 DAPK1P53355 1430 aa11.84□□□□□ -0.51
SPIN4-201ENST00000374884 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
SPIN4-201ENST00000374884 LNPKQ9C0E8 428 aa11.84□□□□□ -0.51
SPIN4-201ENST00000374884 ZRSR1Q15695 479 aaKnown RBP11.84□□□□□ -0.51
SPIN4-201ENST00000374884 PHF14O94880 888 aa11.84□□□□□ -0.51
SPIN4-201ENST00000374884 NUCB2P80303 420 aa11.83□□□□□ -0.52
SPIN4-201ENST00000374884 EFCAB2Q5VUJ9 269 aa11.83□□□□□ -0.52
SPIN4-201ENST00000374884 DRC7Q8IY82 874 aa11.83□□□□□ -0.52
SPIN4-201ENST00000374884 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
SPIN4-201ENST00000374884 CCDC173Q0VFZ6 552 aa11.82□□□□□ -0.52
SPIN4-201ENST00000374884 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
SPIN4-201ENST00000374884 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
SPIN4-201ENST00000374884 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
SPIN4-201ENST00000374884 BIVM-ERCC5R4GMW8 1640 aa11.82□□□□□ -0.52
SPIN4-201ENST00000374884 NINLQ9Y2I6 1382 aa11.81□□□□□ -0.52
SPIN4-201ENST00000374884 MTERF4Q7Z6M4 381 aaKnown RBP11.81□□□□□ -0.52
SPIN4-201ENST00000374884 TCP11L2Q8N4U5 519 aa11.81□□□□□ -0.52
SPIN4-201ENST00000374884 TRAK1Q9UPV9 953 aa11.81□□□□□ -0.52
SPIN4-201ENST00000374884 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
SPIN4-201ENST00000374884 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
SPIN4-201ENST00000374884 MCTP1Q6DN14 999 aa11.8□□□□□ -0.52
SPIN4-201ENST00000374884 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
SPIN4-201ENST00000374884 KIAA1211Q6ZU35 1233 aa11.8□□□□□ -0.52
SPIN4-201ENST00000374884 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
SPIN4-201ENST00000374884 TBC1D2Q9BYX2 928 aa11.79□□□□□ -0.52
SPIN4-201ENST00000374884 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
SPIN4-201ENST00000374884 GOLGA6L6A8MZA4 724 aa11.79□□□□□ -0.52
SPIN4-201ENST00000374884 NRDCO43847 1150 aa11.79□□□□□ -0.52
SPIN4-201ENST00000374884 KCNJ4P48050 445 aa11.79□□□□□ -0.52
SPIN4-201ENST00000374884 HDGFL2Q7Z4V5 671 aaPredicted RBP11.79□□□□□ -0.52
SPIN4-201ENST00000374884 C8orf34Q49A92 452 aa11.79□□□□□ -0.52
SPIN4-201ENST00000374884 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
SPIN4-201ENST00000374884 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
SPIN4-201ENST00000374884 KIF16BQ96L93 1317 aa11.78□□□□□ -0.52
SPIN4-201ENST00000374884 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
SPIN4-201ENST00000374884 KIF3BO15066 747 aa11.78□□□□□ -0.52
SPIN4-201ENST00000374884 HMMRO75330 724 aa11.78□□□□□ -0.52
SPIN4-201ENST00000374884 CIZ1Q9ULV3 898 aaPredicted RBP11.78□□□□□ -0.52
SPIN4-201ENST00000374884 NOL8Q76FK4 1167 aaKnown RBP11.78□□□□□ -0.52
SPIN4-201ENST00000374884 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.52
SPIN4-201ENST00000374884 RBM10P98175 930 aaKnown RBP11.77□□□□□ -0.52
SPIN4-201ENST00000374884 STK26Q9P289 416 aa11.77□□□□□ -0.52
SPIN4-201ENST00000374884 CAVIN1Q6NZI2 390 aaKnown RBP11.77□□□□□ -0.53
SPIN4-201ENST00000374884 REC8O95072 547 aa11.77□□□□□ -0.53
SPIN4-201ENST00000374884 CLCN1P35523 988 aa11.77□□□□□ -0.53
SPIN4-201ENST00000374884 TERF2IPQ9NYB0 399 aa11.77□□□□□ -0.53
SPIN4-201ENST00000374884 ERBINQ96RT1 1412 aa11.76□□□□□ -0.53
SPIN4-201ENST00000374884 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
SPIN4-201ENST00000374884 TRIM6-TRIM34B2RNG4 842 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 LRPPRCP42704 1394 aaKnown RBP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 DHX29Q7Z478 1369 aaKnown RBP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 XRCC6P12956 609 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 ZSCAN30Q86W11 494 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 ABCC5O15440 1437 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
SPIN4-201ENST00000374884 MTHFSP49914 203 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 RIPK4P57078 832 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 ZMYND15Q9H091 742 aa11.75□□□□□ -0.53
SPIN4-201ENST00000374884 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
SPIN4-201ENST00000374884 IGHDP01880 384 aa11.74□□□□□ -0.53
SPIN4-201ENST00000374884 WWC1Q8IX03 1113 aa11.74□□□□□ -0.53
SPIN4-201ENST00000374884 GGT6Q6P531 493 aa11.74□□□□□ -0.53
SPIN4-201ENST00000374884 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
SPIN4-201ENST00000374884 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
SPIN4-201ENST00000374884 FGD1P98174 961 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 AMER1Q5JTC6 1135 aaPredicted RBP11.73□□□□□ -0.53
SPIN4-201ENST00000374884 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 NKTRP30414 1462 aaKnown RBP11.73□□□□□ -0.53
SPIN4-201ENST00000374884 CDC45O75419 566 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 LMOD3Q0VAK6 560 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
SPIN4-201ENST00000374884 RNF214Q8ND24 703 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 PDCL3Q9H2J4 239 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 PTPRGP23470 1445 aa11.73□□□□□ -0.53
SPIN4-201ENST00000374884 K7ELQ4 463 aaPredicted RBP11.72□□□□□ -0.53
SPIN4-201ENST00000374884 C9orf84Q5VXU9 1444 aa11.72□□□□□ -0.53
SPIN4-201ENST00000374884 EXOSC9Q06265 439 aaKnown RBP11.72□□□□□ -0.53
SPIN4-201ENST00000374884 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
SPIN4-201ENST00000374884 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
SPIN4-201ENST00000374884 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
SPIN4-201ENST00000374884 PANK2Q9BZ23 570 aa11.71□□□□□ -0.53
SPIN4-201ENST00000374884 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.53
SPIN4-201ENST00000374884 PRDM2Q13029 1718 aa11.71□□□□□ -0.53
SPIN4-201ENST00000374884 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
SPIN4-201ENST00000374884 RABEP1Q15276 862 aa11.71□□□□□ -0.54
SPIN4-201ENST00000374884 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.54
SPIN4-201ENST00000374884 API5Q9BZZ5 524 aaKnown RBP11.71□□□□□ -0.54
SPIN4-201ENST00000374884 EVC2Q86UK5 1308 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms