RNA–Protein interactions for RNA: ENST00000374708.8

COL11A2-203, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL11A2, Length 6,209 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-203ENST00000374708 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
COL11A2-203ENST00000374708 DHX16O60231 1041 aaKnown RBP18.27■□□□□ 0.52
COL11A2-203ENST00000374708 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
COL11A2-203ENST00000374708 CWC22Q9HCG8 908 aaKnown RBP18.27■□□□□ 0.52
COL11A2-203ENST00000374708 PTPRGP23470 1445 aa18.27■□□□□ 0.52
COL11A2-203ENST00000374708 GOLGA6L19H0YKK7 550 aa18.27■□□□□ 0.51
COL11A2-203ENST00000374708 DDX11L8A8MPP1 907 aa18.26■□□□□ 0.51
COL11A2-203ENST00000374708 IFIT2P09913 472 aaKnown RBP18.26■□□□□ 0.51
COL11A2-203ENST00000374708 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
COL11A2-203ENST00000374708 CCDC47Q96A33 483 aaKnown RBP18.26■□□□□ 0.51
COL11A2-203ENST00000374708 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
COL11A2-203ENST00000374708 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL11A2-203ENST00000374708 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
COL11A2-203ENST00000374708 BECN2A8MW95 431 aa18.24■□□□□ 0.51
COL11A2-203ENST00000374708 ZKSCAN1P17029 563 aaPredicted RBP18.24■□□□□ 0.51
COL11A2-203ENST00000374708 KRI1Q8N9T8 703 aaKnown RBP18.24■□□□□ 0.51
COL11A2-203ENST00000374708 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
COL11A2-203ENST00000374708 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
COL11A2-203ENST00000374708 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
COL11A2-203ENST00000374708 TNNT3P45378 269 aaPredicted RBP18.23■□□□□ 0.51
COL11A2-203ENST00000374708 TRDNQ13061 729 aa18.23■□□□□ 0.51
COL11A2-203ENST00000374708 ATF3P18847 181 aa18.22■□□□□ 0.51
COL11A2-203ENST00000374708 ANO2Q9NQ90 1003 aa18.22■□□□□ 0.51
COL11A2-203ENST00000374708 CPLX1O14810 134 aa18.22■□□□□ 0.51
COL11A2-203ENST00000374708 G3BP1Q13283 466 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL11A2-203ENST00000374708 RBM33Q96EV2 1170 aaKnown RBP18.22■□□□□ 0.51
COL11A2-203ENST00000374708 PCMTD1Q96MG8 357 aaPredicted RBP18.21■□□□□ 0.51
COL11A2-203ENST00000374708 ERICH2A1L162 156 aa18.21■□□□□ 0.51
COL11A2-203ENST00000374708 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
COL11A2-203ENST00000374708 ROCK1Q13464 1354 aa18.2■□□□□ 0.5
COL11A2-203ENST00000374708 API5Q9BZZ5 524 aaKnown RBP18.2■□□□□ 0.5
COL11A2-203ENST00000374708 FOXD4L6Q3SYB3 417 aaPredicted RBP18.2■□□□□ 0.5
COL11A2-203ENST00000374708 CCDC70Q6NSX1 233 aa18.2■□□□□ 0.5
COL11A2-203ENST00000374708 FOXD4L3Q6VB84 417 aaPredicted RBP18.2■□□□□ 0.5
COL11A2-203ENST00000374708 NFXL1Q6ZNB6 911 aa18.19■□□□□ 0.5
COL11A2-203ENST00000374708 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
COL11A2-203ENST00000374708 CCDC43Q96MW1 224 aaKnown RBP18.19■□□□□ 0.5
COL11A2-203ENST00000374708 TOP2AP11388 1531 aaKnown RBP18.19■□□□□ 0.5
COL11A2-203ENST00000374708 REC8O95072 547 aa18.19■□□□□ 0.5
COL11A2-203ENST00000374708 RIPK4P57078 832 aa18.19■□□□□ 0.5
COL11A2-203ENST00000374708 RNF20Q5VTR2 975 aa18.18■□□□□ 0.5
COL11A2-203ENST00000374708 ANKRD20A12PQ8NF67 263 aa18.18■□□□□ 0.5
COL11A2-203ENST00000374708 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
COL11A2-203ENST00000374708 FKBP5Q13451 457 aaPredicted RBP18.18■□□□□ 0.5
COL11A2-203ENST00000374708 DDX49Q9Y6V7 483 aaKnown RBP18.18■□□□□ 0.5
COL11A2-203ENST00000374708 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
COL11A2-203ENST00000374708 CCAR2Q8N163 923 aaKnown RBP18.17■□□□□ 0.5
COL11A2-203ENST00000374708 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
COL11A2-203ENST00000374708 HOOK1Q9UJC3 728 aaKnown RBP18.17■□□□□ 0.5
COL11A2-203ENST00000374708 COG6Q9Y2V7 657 aa18.17■□□□□ 0.5
COL11A2-203ENST00000374708 SKOR2Q2VWA4 1001 aaPredicted RBP18.16■□□□□ 0.5
COL11A2-203ENST00000374708 PLIN1O60240 522 aa18.16■□□□□ 0.5
COL11A2-203ENST00000374708 USP47Q96K76 1375 aa18.15■□□□□ 0.5
COL11A2-203ENST00000374708 IPO7O95373 1038 aaKnown RBP18.15■□□□□ 0.5
COL11A2-203ENST00000374708 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
COL11A2-203ENST00000374708 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
COL11A2-203ENST00000374708 APAF1O14727 1248 aa18.15■□□□□ 0.5
COL11A2-203ENST00000374708 HSP90AB4PQ58FF6 505 aa18.14■□□□□ 0.49
COL11A2-203ENST00000374708 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
COL11A2-203ENST00000374708 CRBNQ96SW2 442 aa18.13■□□□□ 0.49
COL11A2-203ENST00000374708 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
COL11A2-203ENST00000374708 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
COL11A2-203ENST00000374708 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
COL11A2-203ENST00000374708 DZIP1LQ8IYY4 767 aaKnown RBP18.12■□□□□ 0.49
COL11A2-203ENST00000374708 NLRP2Q9NX02 1062 aa18.12■□□□□ 0.49
COL11A2-203ENST00000374708 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
COL11A2-203ENST00000374708 ERC2O15083 957 aa18.11■□□□□ 0.49
COL11A2-203ENST00000374708 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
COL11A2-203ENST00000374708 GNAI1P63096 354 aa18.1■□□□□ 0.49
COL11A2-203ENST00000374708 BICD2Q8TD16 824 aa18.1■□□□□ 0.49
COL11A2-203ENST00000374708 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
COL11A2-203ENST00000374708 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 GPS2Q13227 327 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 AIMP1Q12904 312 aaKnown RBP18.09■□□□□ 0.49
COL11A2-203ENST00000374708 EXOC6Q8TAG9 804 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 WIZO95785 1651 aa18.09■□□□□ 0.49
COL11A2-203ENST00000374708 FYB1O15117 783 aa18.08■□□□□ 0.48
COL11A2-203ENST00000374708 PDE4AP27815 886 aa18.08■□□□□ 0.48
COL11A2-203ENST00000374708 SETQ01105 290 aaPredicted RBP18.07■□□□□ 0.48
COL11A2-203ENST00000374708 RALYLQ86SE5 291 aaKnown RBP18.07■□□□□ 0.48
COL11A2-203ENST00000374708 WASHC4Q2M389 1173 aa18.07■□□□□ 0.48
COL11A2-203ENST00000374708 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
COL11A2-203ENST00000374708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.06■□□□□ 0.48
COL11A2-203ENST00000374708 HMOX1P09601 288 aa18.06■□□□□ 0.48
COL11A2-203ENST00000374708 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
COL11A2-203ENST00000374708 NUTM2GQ5VZR2 741 aa18.05■□□□□ 0.48
COL11A2-203ENST00000374708 SMC3Q9UQE7 1217 aa18.05■□□□□ 0.48
COL11A2-203ENST00000374708 R3HCC1Q9Y3T6 440 aaKnown RBP18.05■□□□□ 0.48
COL11A2-203ENST00000374708 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
COL11A2-203ENST00000374708 VPS37CA5D8V6 355 aaPredicted RBP18.04■□□□□ 0.48
COL11A2-203ENST00000374708 ZNF592Q92610 1267 aa18.04■□□□□ 0.48
COL11A2-203ENST00000374708 ZBED9Q6R2W3 1325 aa18.03■□□□□ 0.48
COL11A2-203ENST00000374708 FBXO3Q9UK99 471 aa18.03■□□□□ 0.48
COL11A2-203ENST00000374708 FOSBP53539 338 aa18.03■□□□□ 0.48
COL11A2-203ENST00000374708 SLC4A3P48751 1232 aa18.02■□□□□ 0.48
COL11A2-203ENST00000374708 CT47A1Q5JQC4 288 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms