RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CEP170BQ9Y4F5 1589 aaPredicted RBP25.09■■□□□ 1.61
C9orf43-202ENST00000374165 RPGRIP1LQ68CZ1 1315 aa25.09■■□□□ 1.61
C9orf43-202ENST00000374165 UHRF1BP1Q6BDS2 1440 aa25.09■■□□□ 1.61
C9orf43-202ENST00000374165 PRAG1Q86YV5 1406 aa25.09■■□□□ 1.61
C9orf43-202ENST00000374165 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.61
C9orf43-202ENST00000374165 ZFYVE9O95405 1425 aa25.05■■□□□ 1.6
C9orf43-202ENST00000374165 MYOM2P54296 1465 aa25.05■■□□□ 1.6
C9orf43-202ENST00000374165 RIMS2Q9UQ26 1411 aa25.04■■□□□ 1.6
C9orf43-202ENST00000374165 TMEM2Q9UHN6 1383 aa25.04■■□□□ 1.6
C9orf43-202ENST00000374165 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
C9orf43-202ENST00000374165 NRXN1Q9ULB1 1477 aa25.02■■□□□ 1.6
C9orf43-202ENST00000374165 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
C9orf43-202ENST00000374165 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
C9orf43-202ENST00000374165 NBPF1Q3BBV0 1214 aa25.02■■□□□ 1.6
C9orf43-202ENST00000374165 THEMISQ8N1K5 641 aaPredicted RBP25.02■■□□□ 1.6
C9orf43-202ENST00000374165 LTKP29376 864 aa25.01■■□□□ 1.59
C9orf43-202ENST00000374165 TRPM1Q7Z4N2 1603 aa25■■□□□ 1.59
C9orf43-202ENST00000374165 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
C9orf43-202ENST00000374165 CFAP70Q5T0N1 1121 aa24.98■■□□□ 1.59
C9orf43-202ENST00000374165 SLIT1O75093 1534 aa24.97■■□□□ 1.59
C9orf43-202ENST00000374165 ARHGAP23Q9P227 1491 aa24.97■■□□□ 1.59
C9orf43-202ENST00000374165 TXNDC2Q86VQ3 553 aa24.96■■□□□ 1.59
C9orf43-202ENST00000374165 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.59
C9orf43-202ENST00000374165 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
C9orf43-202ENST00000374165 ROCK2O75116 1388 aaKnown RBP24.92■■□□□ 1.58
C9orf43-202ENST00000374165 C14orf93Q9H972 538 aaKnown RBP24.91■■□□□ 1.58
C9orf43-202ENST00000374165 HDGFP51858 240 aaKnown RBP24.91■■□□□ 1.58
C9orf43-202ENST00000374165 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
C9orf43-202ENST00000374165 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
C9orf43-202ENST00000374165 HSPA2P54652 639 aa24.9■■□□□ 1.58
C9orf43-202ENST00000374165 NRXN3Q9Y4C0 1643 aa24.89■■□□□ 1.58
C9orf43-202ENST00000374165 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.57
C9orf43-202ENST00000374165 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.57
C9orf43-202ENST00000374165 KIAA1210Q9ULL0 1709 aa24.89■■□□□ 1.57
C9orf43-202ENST00000374165 TMEM132EQ6IEE7 984 aa24.88■■□□□ 1.57
C9orf43-202ENST00000374165 SCAF11Q99590 1463 aaKnown RBP24.87■■□□□ 1.57
C9orf43-202ENST00000374165 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
C9orf43-202ENST00000374165 IQGAP1P46940 1657 aa24.87■■□□□ 1.57
C9orf43-202ENST00000374165 GPRASP1Q5JY77 1395 aa24.87■■□□□ 1.57
C9orf43-202ENST00000374165 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
C9orf43-202ENST00000374165 ANKLE2Q86XL3 938 aa24.85■■□□□ 1.57
C9orf43-202ENST00000374165 BCANQ96GW7 911 aa24.85■■□□□ 1.57
C9orf43-202ENST00000374165 PLEKHG1Q9ULL1 1385 aa24.84■■□□□ 1.57
C9orf43-202ENST00000374165 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
C9orf43-202ENST00000374165 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
C9orf43-202ENST00000374165 SETBP1Q9Y6X0 1596 aa24.83■■□□□ 1.57
C9orf43-202ENST00000374165 ADAMTS13Q76LX8 1427 aa24.82■■□□□ 1.56
C9orf43-202ENST00000374165 ASXL1Q8IXJ9 1541 aa24.82■■□□□ 1.56
C9orf43-202ENST00000374165 SLC26A8Q96RN1 970 aa24.82■■□□□ 1.56
C9orf43-202ENST00000374165 NCKAP5LQ9HCH0 1330 aa24.82■■□□□ 1.56
C9orf43-202ENST00000374165 HSPA5P11021 654 aaKnown RBP24.81■■□□□ 1.56
C9orf43-202ENST00000374165 LAMC1P11047 1609 aa24.81■■□□□ 1.56
C9orf43-202ENST00000374165 USP47Q96K76 1375 aa24.8■■□□□ 1.56
C9orf43-202ENST00000374165 METP08581 1390 aa24.8■■□□□ 1.56
C9orf43-202ENST00000374165 EIF4G2P78344 907 aaKnown RBP eCLIP24.79■■□□□ 1.56
C9orf43-202ENST00000374165 POLR1AO95602 1720 aaPredicted RBP24.78■■□□□ 1.56
C9orf43-202ENST00000374165 MED14O60244 1454 aa24.77■■□□□ 1.56
C9orf43-202ENST00000374165 TRAK1Q9UPV9 953 aa24.75■■□□□ 1.55
C9orf43-202ENST00000374165 ST20-MTHFSA0A0A6YYL1 179 aa24.74■■□□□ 1.55
C9orf43-202ENST00000374165 STK26Q9P289 416 aa24.74■■□□□ 1.55
C9orf43-202ENST00000374165 STRCQ7RTU9 1775 aa24.72■■□□□ 1.55
C9orf43-202ENST00000374165 NPHP4O75161 1426 aaPredicted RBP24.72■■□□□ 1.55
C9orf43-202ENST00000374165 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
C9orf43-202ENST00000374165 YTHDC2Q9H6S0 1430 aaKnown RBP24.71■■□□□ 1.55
C9orf43-202ENST00000374165 DIEXFQ68CQ4 756 aaKnown RBP24.69■■□□□ 1.54
C9orf43-202ENST00000374165 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
C9orf43-202ENST00000374165 C11orf95C9JLR9 678 aaPredicted RBP24.66■■□□□ 1.54
C9orf43-202ENST00000374165 ARHGEF28Q8N1W1 1705 aaKnown RBP24.66■■□□□ 1.54
C9orf43-202ENST00000374165 TESK2Q96S53 571 aa24.65■■□□□ 1.54
C9orf43-202ENST00000374165 LRPPRCP42704 1394 aaKnown RBP24.65■■□□□ 1.54
C9orf43-202ENST00000374165 DIP2AQ14689 1571 aa24.64■■□□□ 1.54
C9orf43-202ENST00000374165 ABCC11Q96J66 1382 aa24.63■■□□□ 1.53
C9orf43-202ENST00000374165 SAFB2Q14151 953 aaKnown RBP eCLIP24.62■■□□□ 1.53
C9orf43-202ENST00000374165 AMOTL2Q9Y2J4 779 aa24.62■■□□□ 1.53
C9orf43-202ENST00000374165 WAPLQ7Z5K2 1190 aa24.61■■□□□ 1.53
C9orf43-202ENST00000374165 PRAM1Q96QH2 718 aa24.61■■□□□ 1.53
C9orf43-202ENST00000374165 EIF3AQ14152 1382 aaKnown RBP24.6■■□□□ 1.53
C9orf43-202ENST00000374165 CHD2O14647 1828 aaKnown RBP24.59■■□□□ 1.53
C9orf43-202ENST00000374165 PLEKHH1Q9ULM0 1364 aa24.59■■□□□ 1.53
C9orf43-202ENST00000374165 CENPJQ9HC77 1338 aaPredicted RBP24.59■■□□□ 1.53
C9orf43-202ENST00000374165 ROBO2Q9HCK4 1378 aa24.59■■□□□ 1.53
C9orf43-202ENST00000374165 KCNA6P17658 529 aa24.57■■□□□ 1.52
C9orf43-202ENST00000374165 TECPR2O15040 1411 aa24.57■■□□□ 1.52
C9orf43-202ENST00000374165 QRICH2Q9H0J4 1663 aa24.57■■□□□ 1.52
C9orf43-202ENST00000374165 KNDC1Q76NI1 1749 aa24.57■■□□□ 1.52
C9orf43-202ENST00000374165 PIK3R4Q99570 1358 aa24.56■■□□□ 1.52
C9orf43-202ENST00000374165 XRN1Q8IZH2 1706 aaKnown RBP24.55■■□□□ 1.52
C9orf43-202ENST00000374165 DLC1Q96QB1 1528 aa24.55■■□□□ 1.52
C9orf43-202ENST00000374165 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
C9orf43-202ENST00000374165 POGKQ9P215 609 aa24.54■■□□□ 1.52
C9orf43-202ENST00000374165 CPS1P31327 1500 aa24.54■■□□□ 1.52
C9orf43-202ENST00000374165 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
C9orf43-202ENST00000374165 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
C9orf43-202ENST00000374165 KIF7Q2M1P5 1343 aa24.52■■□□□ 1.52
C9orf43-202ENST00000374165 RBM33Q96EV2 1170 aaKnown RBP24.51■■□□□ 1.51
C9orf43-202ENST00000374165 STRCP1A6NGW2 1772 aa24.5■■□□□ 1.51
C9orf43-202ENST00000374165 MINK1Q8N4C8 1332 aaPredicted RBP24.5■■□□□ 1.51
C9orf43-202ENST00000374165 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
C9orf43-202ENST00000374165 SIRT1Q96EB6 747 aa24.5■■□□□ 1.51
C9orf43-202ENST00000374165 SBNO2Q9Y2G9 1366 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms