RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TAF7LQ5H9L4 462 aa17.44■□□□□ 0.38
LMX1B-202ENST00000373474 DIAPH1O60610 1272 aaKnown RBP17.43■□□□□ 0.38
LMX1B-202ENST00000373474 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
LMX1B-202ENST00000373474 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
LMX1B-202ENST00000373474 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
LMX1B-202ENST00000373474 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
LMX1B-202ENST00000373474 CCDC70Q6NSX1 233 aa17.43■□□□□ 0.38
LMX1B-202ENST00000373474 CHMP5Q9NZZ3 219 aa17.43■□□□□ 0.38
LMX1B-202ENST00000373474 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
LMX1B-202ENST00000373474 ROCK1Q13464 1354 aa17.42■□□□□ 0.38
LMX1B-202ENST00000373474 ATP6V1DQ9Y5K8 247 aa17.42■□□□□ 0.38
LMX1B-202ENST00000373474 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.42■□□□□ 0.38
LMX1B-202ENST00000373474 EFCAB5A4FU69 1503 aa17.41■□□□□ 0.38
LMX1B-202ENST00000373474 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
LMX1B-202ENST00000373474 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
LMX1B-202ENST00000373474 RIPK4P57078 832 aa17.41■□□□□ 0.38
LMX1B-202ENST00000373474 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
LMX1B-202ENST00000373474 REC8O95072 547 aa17.4■□□□□ 0.38
LMX1B-202ENST00000373474 API5Q9BZZ5 524 aaKnown RBP17.4■□□□□ 0.38
LMX1B-202ENST00000373474 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
LMX1B-202ENST00000373474 MTERF4Q7Z6M4 381 aaKnown RBP17.4■□□□□ 0.38
LMX1B-202ENST00000373474 MINK1Q8N4C8 1332 aaPredicted RBP17.39■□□□□ 0.37
LMX1B-202ENST00000373474 MAP7D2Q96T17 732 aa17.38■□□□□ 0.37
LMX1B-202ENST00000373474 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
LMX1B-202ENST00000373474 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
LMX1B-202ENST00000373474 H3BQV1 296 aa17.38■□□□□ 0.37
LMX1B-202ENST00000373474 IFFO2Q5TF58 517 aa17.38■□□□□ 0.37
LMX1B-202ENST00000373474 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
LMX1B-202ENST00000373474 CHMP4CQ96CF2 233 aa17.36■□□□□ 0.37
LMX1B-202ENST00000373474 NUTM2FA1L443 756 aa17.36■□□□□ 0.37
LMX1B-202ENST00000373474 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
LMX1B-202ENST00000373474 SF3A1Q15459 793 aaKnown RBP17.35■□□□□ 0.37
LMX1B-202ENST00000373474 RUFY2Q8WXA3 655 aa17.34■□□□□ 0.37
LMX1B-202ENST00000373474 DIAPH3Q9NSV4 1193 aa17.34■□□□□ 0.37
LMX1B-202ENST00000373474 GOLGA6L19H0YKK7 550 aa17.34■□□□□ 0.37
LMX1B-202ENST00000373474 FAM184AQ8NB25 1140 aa17.34■□□□□ 0.37
LMX1B-202ENST00000373474 TSR1Q2NL82 804 aaKnown RBP17.34■□□□□ 0.37
LMX1B-202ENST00000373474 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
LMX1B-202ENST00000373474 CFTRP13569 1480 aa17.34■□□□□ 0.37
LMX1B-202ENST00000373474 NFKBIBQ15653 356 aa17.34■□□□□ 0.37
LMX1B-202ENST00000373474 INTS3Q68E01 1043 aaKnown RBP17.33■□□□□ 0.37
LMX1B-202ENST00000373474 C1orf141Q5JVX7 400 aa17.33■□□□□ 0.36
LMX1B-202ENST00000373474 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
LMX1B-202ENST00000373474 TPM1P09493 284 aa17.32■□□□□ 0.36
LMX1B-202ENST00000373474 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
LMX1B-202ENST00000373474 PANK1Q8TE04 598 aa17.32■□□□□ 0.36
LMX1B-202ENST00000373474 FAM13BQ9NYF5 915 aa17.32■□□□□ 0.36
LMX1B-202ENST00000373474 GNAI1P63096 354 aa17.32■□□□□ 0.36
LMX1B-202ENST00000373474 PRXQ9BXM0 1461 aa17.32■□□□□ 0.36
LMX1B-202ENST00000373474 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-202ENST00000373474 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-202ENST00000373474 NUCB2P80303 420 aa17.3■□□□□ 0.36
LMX1B-202ENST00000373474 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
LMX1B-202ENST00000373474 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
LMX1B-202ENST00000373474 CCAR2Q8N163 923 aaKnown RBP17.3■□□□□ 0.36
LMX1B-202ENST00000373474 ACBD3Q9H3P7 528 aa17.3■□□□□ 0.36
LMX1B-202ENST00000373474 HECW1Q76N89 1606 aa17.3■□□□□ 0.36
LMX1B-202ENST00000373474 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
LMX1B-202ENST00000373474 ANO2Q9NQ90 1003 aa17.29■□□□□ 0.36
LMX1B-202ENST00000373474 PPP2R1AP30153 589 aa17.29■□□□□ 0.36
LMX1B-202ENST00000373474 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
LMX1B-202ENST00000373474 ARGLU1Q9NWB6 273 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-202ENST00000373474 SMG6Q86US8 1419 aaKnown RBP17.29■□□□□ 0.36
LMX1B-202ENST00000373474 KIAA1107Q9UPP5 1409 aa17.29■□□□□ 0.36
LMX1B-202ENST00000373474 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
LMX1B-202ENST00000373474 RRP12Q5JTH9 1297 aaKnown RBP17.29■□□□□ 0.36
LMX1B-202ENST00000373474 BECN2A8MW95 431 aa17.28■□□□□ 0.36
LMX1B-202ENST00000373474 SUPT6HQ7KZ85 1726 aaKnown RBP17.28■□□□□ 0.36
LMX1B-202ENST00000373474 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
LMX1B-202ENST00000373474 APPP05067 770 aa17.28■□□□□ 0.36
LMX1B-202ENST00000373474 ZKSCAN1P17029 563 aaPredicted RBP17.28■□□□□ 0.36
LMX1B-202ENST00000373474 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
LMX1B-202ENST00000373474 PKNOX2Q96KN3 472 aa17.28■□□□□ 0.36
LMX1B-202ENST00000373474 LNPKQ9C0E8 428 aa17.28■□□□□ 0.36
LMX1B-202ENST00000373474 CCDC66A2RUB6 948 aa17.27■□□□□ 0.36
LMX1B-202ENST00000373474 TEFQ10587 303 aa17.27■□□□□ 0.36
LMX1B-202ENST00000373474 TOMM22Q9NS69 142 aa17.27■□□□□ 0.36
LMX1B-202ENST00000373474 CWC15Q9P013 229 aaKnown RBP17.27■□□□□ 0.36
LMX1B-202ENST00000373474 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.36
LMX1B-202ENST00000373474 CDR1P51861 262 aa17.27■□□□□ 0.35
LMX1B-202ENST00000373474 CDC45O75419 566 aa17.26■□□□□ 0.35
LMX1B-202ENST00000373474 AKNAQ7Z591 1439 aa17.26■□□□□ 0.35
LMX1B-202ENST00000373474 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
LMX1B-202ENST00000373474 TPM2P07951 284 aa17.26■□□□□ 0.35
LMX1B-202ENST00000373474 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
LMX1B-202ENST00000373474 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
LMX1B-202ENST00000373474 MCTP1Q6DN14 999 aa17.26■□□□□ 0.35
LMX1B-202ENST00000373474 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
LMX1B-202ENST00000373474 NEXNQ0ZGT2 675 aa17.25■□□□□ 0.35
LMX1B-202ENST00000373474 CREBRFQ8IUR6 639 aa17.25■□□□□ 0.35
LMX1B-202ENST00000373474 TPD52L1Q16890 204 aaPredicted RBP17.25■□□□□ 0.35
LMX1B-202ENST00000373474 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
LMX1B-202ENST00000373474 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
LMX1B-202ENST00000373474 PRM3Q9NNZ6 103 aa17.24■□□□□ 0.35
LMX1B-202ENST00000373474 AK7Q96M32 723 aa17.24■□□□□ 0.35
LMX1B-202ENST00000373474 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
LMX1B-202ENST00000373474 ZNF592Q92610 1267 aa17.24■□□□□ 0.35
LMX1B-202ENST00000373474 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
LMX1B-202ENST00000373474 FKBP5Q13451 457 aaPredicted RBP17.23■□□□□ 0.35
LMX1B-202ENST00000373474 RNF20Q5VTR2 975 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms