RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 FANCIQ9NVI1 1328 aa8.37□□□□□ -1.07
CHD6-203ENST00000373233 ZBTB7CA1YPR0 619 aa8.37□□□□□ -1.07
CHD6-203ENST00000373233 RPRD2Q5VT52 1461 aaKnown RBP8.37□□□□□ -1.07
CHD6-203ENST00000373233 SAFB2Q14151 953 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD6-203ENST00000373233 EIF2AK4Q9P2K8 1649 aaKnown RBP8.37□□□□□ -1.07
CHD6-203ENST00000373233 TRAPPC8Q9Y2L5 1435 aa8.36□□□□□ -1.07
CHD6-203ENST00000373233 SETQ01105 290 aaPredicted RBP8.36□□□□□ -1.07
CHD6-203ENST00000373233 DENND4BO75064 1496 aaPredicted RBP8.36□□□□□ -1.07
CHD6-203ENST00000373233 RALBP1Q15311 655 aa8.36□□□□□ -1.07
CHD6-203ENST00000373233 ZNF518AQ6AHZ1 1483 aa8.36□□□□□ -1.07
CHD6-203ENST00000373233 B4GALNT3Q6L9W6 998 aa8.36□□□□□ -1.07
CHD6-203ENST00000373233 KIF7Q2M1P5 1343 aa8.36□□□□□ -1.07
CHD6-203ENST00000373233 RAPGEF3O95398 923 aa8.35□□□□□ -1.07
CHD6-203ENST00000373233 PZPP20742 1482 aa8.35□□□□□ -1.07
CHD6-203ENST00000373233 CFAP53Q96M91 514 aa8.35□□□□□ -1.07
CHD6-203ENST00000373233 GZF1Q9H116 711 aaPredicted RBP8.35□□□□□ -1.07
CHD6-203ENST00000373233 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
CHD6-203ENST00000373233 FAM13BQ9NYF5 915 aa8.34□□□□□ -1.07
CHD6-203ENST00000373233 TEX14Q8IWB6 1497 aa8.34□□□□□ -1.07
CHD6-203ENST00000373233 NRDCO43847 1150 aa8.34□□□□□ -1.07
CHD6-203ENST00000373233 GSE1Q14687 1217 aa8.34□□□□□ -1.07
CHD6-203ENST00000373233 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
CHD6-203ENST00000373233 NBPF8Q3BBV2 869 aa8.34□□□□□ -1.07
CHD6-203ENST00000373233 RRP9O43818 475 aaKnown RBP8.34□□□□□ -1.07
CHD6-203ENST00000373233 ABCC1P33527 1531 aa8.34□□□□□ -1.07
CHD6-203ENST00000373233 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
CHD6-203ENST00000373233 PLXNC1O60486 1568 aa8.33□□□□□ -1.08
CHD6-203ENST00000373233 BRPF3Q9ULD4 1205 aa8.33□□□□□ -1.08
CHD6-203ENST00000373233 SENP3-EIF4A1A0A087X0R7 540 aa8.33□□□□□ -1.08
CHD6-203ENST00000373233 RGS3P49796 1198 aa8.33□□□□□ -1.08
CHD6-203ENST00000373233 ARHGEF12Q9NZN5 1544 aa8.32□□□□□ -1.08
CHD6-203ENST00000373233 ZRSR1Q15695 479 aaKnown RBP8.32□□□□□ -1.08
CHD6-203ENST00000373233 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
CHD6-203ENST00000373233 WASHC2AQ641Q2 1341 aa8.32□□□□□ -1.08
CHD6-203ENST00000373233 VGFO15240 615 aaPredicted RBP8.32□□□□□ -1.08
CHD6-203ENST00000373233 MORC1Q86VD1 984 aa8.32□□□□□ -1.08
CHD6-203ENST00000373233 STAC3Q96MF2 364 aa8.32□□□□□ -1.08
CHD6-203ENST00000373233 PLEKHG5O94827 1062 aa8.32□□□□□ -1.08
CHD6-203ENST00000373233 HSCBQ8IWL3 235 aa8.32□□□□□ -1.08
CHD6-203ENST00000373233 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
CHD6-203ENST00000373233 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.31□□□□□ -1.08
CHD6-203ENST00000373233 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
CHD6-203ENST00000373233 A2MP01023 1474 aa8.31□□□□□ -1.08
CHD6-203ENST00000373233 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
CHD6-203ENST00000373233 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
CHD6-203ENST00000373233 DHX29Q7Z478 1369 aaKnown RBP8.3□□□□□ -1.08
CHD6-203ENST00000373233 RTEL1-TNFRSF6BF6WH68 1400 aa8.3□□□□□ -1.08
CHD6-203ENST00000373233 MYH16Q9H6N6 1097 aa8.3□□□□□ -1.08
CHD6-203ENST00000373233 HECW2Q9P2P5 1572 aa8.3□□□□□ -1.08
CHD6-203ENST00000373233 PANK3Q9H999 370 aa8.3□□□□□ -1.08
CHD6-203ENST00000373233 EID1Q9Y6B2 187 aa8.3□□□□□ -1.08
CHD6-203ENST00000373233 MAPK8IP2Q13387 824 aaPredicted RBP8.3□□□□□ -1.08
CHD6-203ENST00000373233 HSP90AB1P08238 724 aaKnown RBP8.29□□□□□ -1.08
CHD6-203ENST00000373233 RALGAPBQ86X10 1494 aa8.29□□□□□ -1.08
CHD6-203ENST00000373233 MAP7D2Q96T17 732 aa8.29□□□□□ -1.08
CHD6-203ENST00000373233 HDGFL2Q7Z4V5 671 aaPredicted RBP8.29□□□□□ -1.08
CHD6-203ENST00000373233 SLKQ9H2G2 1235 aaPredicted RBP8.29□□□□□ -1.08
CHD6-203ENST00000373233 IQGAP3Q86VI3 1631 aa8.29□□□□□ -1.08
CHD6-203ENST00000373233 ABCA9Q8IUA7 1624 aa8.29□□□□□ -1.08
CHD6-203ENST00000373233 MYBBP1AQ9BQG0 1328 aaKnown RBP8.29□□□□□ -1.08
CHD6-203ENST00000373233 MTERF4Q7Z6M4 381 aaKnown RBP8.29□□□□□ -1.08
CHD6-203ENST00000373233 SPHKAPQ2M3C7 1700 aa8.29□□□□□ -1.08
CHD6-203ENST00000373233 GBP4Q96PP9 640 aa8.29□□□□□ -1.08
CHD6-203ENST00000373233 UNC13BO14795 1591 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 MBD5Q9P267 1494 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 ZFYVE16Q7Z3T8 1539 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 POGZQ7Z3K3 1410 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 NEO1Q92859 1461 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 NBPF1Q3BBV0 1214 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 PATL2C9JE40 543 aaKnown RBP8.28□□□□□ -1.08
CHD6-203ENST00000373233 TET3O43151 1660 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 CEP152O94986 1710 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 EVC2Q86UK5 1308 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 DRC7Q8IY82 874 aa8.28□□□□□ -1.08
CHD6-203ENST00000373233 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
CHD6-203ENST00000373233 TPM2P07951 284 aa8.27□□□□□ -1.08
CHD6-203ENST00000373233 PRKRIP1Q9H875 184 aaPredicted RBP8.27□□□□□ -1.09
CHD6-203ENST00000373233 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
CHD6-203ENST00000373233 ZMYND15Q9H091 742 aa8.27□□□□□ -1.09
CHD6-203ENST00000373233 KDM5DQ9BY66 1539 aa8.27□□□□□ -1.09
CHD6-203ENST00000373233 TAF3Q5VWG9 929 aa8.26□□□□□ -1.09
CHD6-203ENST00000373233 SPRYD3Q8NCJ5 442 aa8.26□□□□□ -1.09
CHD6-203ENST00000373233 FAM43AQ8N2R8 423 aa8.26□□□□□ -1.09
CHD6-203ENST00000373233 TERF2IPQ9NYB0 399 aa8.26□□□□□ -1.09
CHD6-203ENST00000373233 RPGRIP1LQ68CZ1 1315 aa8.26□□□□□ -1.09
CHD6-203ENST00000373233 TAF7LQ5H9L4 462 aa8.26□□□□□ -1.09
CHD6-203ENST00000373233 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHD6-203ENST00000373233 NOM1Q5C9Z4 860 aaKnown RBP8.25□□□□□ -1.09
CHD6-203ENST00000373233 PRAG1Q86YV5 1406 aa8.25□□□□□ -1.09
CHD6-203ENST00000373233 CCDC66A2RUB6 948 aa8.25□□□□□ -1.09
CHD6-203ENST00000373233 NUDCQ9Y266 331 aa8.25□□□□□ -1.09
CHD6-203ENST00000373233 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
CHD6-203ENST00000373233 MAPK8IP3Q9UPT6 1336 aa8.24□□□□□ -1.09
CHD6-203ENST00000373233 CGNL1Q0VF96 1302 aa8.24□□□□□ -1.09
CHD6-203ENST00000373233 SLC52A1Q9NWF4 448 aa8.24□□□□□ -1.09
CHD6-203ENST00000373233 RIMBP3CA6NJZ7 1639 aa8.24□□□□□ -1.09
CHD6-203ENST00000373233 RIMBP3BA6NNM3 1639 aa8.24□□□□□ -1.09
CHD6-203ENST00000373233 RIMBP3Q9UFD9 1639 aa8.24□□□□□ -1.09
CHD6-203ENST00000373233 CFAP70Q5T0N1 1121 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms