RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ADGRF5Q8IZF2 1346 aa25.25■■□□□ 1.63
USP49-202ENST00000373010 CFAP65Q6ZU64 1925 aaKnown RBP25.24■■□□□ 1.63
USP49-202ENST00000373010 ABCA6Q8N139 1617 aa25.24■■□□□ 1.63
USP49-202ENST00000373010 CFAP70Q5T0N1 1121 aa25.24■■□□□ 1.63
USP49-202ENST00000373010 GGT6Q6P531 493 aa25.23■■□□□ 1.63
USP49-202ENST00000373010 IFT172Q9UG01 1749 aa25.23■■□□□ 1.63
USP49-202ENST00000373010 MYOM2P54296 1465 aa25.22■■□□□ 1.63
USP49-202ENST00000373010 RAPGEF3O95398 923 aa25.2■■□□□ 1.62
USP49-202ENST00000373010 EIF3AQ14152 1382 aaKnown RBP25.19■■□□□ 1.62
USP49-202ENST00000373010 NPATQ14207 1427 aa25.18■■□□□ 1.62
USP49-202ENST00000373010 CHGAP10645 457 aaKnown RBP25.18■■□□□ 1.62
USP49-202ENST00000373010 CDCA8Q53HL2 280 aa25.17■■□□□ 1.62
USP49-202ENST00000373010 SALL2Q9Y467 1007 aaPredicted RBP25.17■■□□□ 1.62
USP49-202ENST00000373010 SYNMO15061 1565 aa25.16■■□□□ 1.62
USP49-202ENST00000373010 B4GALNT3Q6L9W6 998 aa25.16■■□□□ 1.62
USP49-202ENST00000373010 NEO1Q92859 1461 aa25.16■■□□□ 1.62
USP49-202ENST00000373010 KNSTRNQ9Y448 316 aa25.15■■□□□ 1.62
USP49-202ENST00000373010 ADGRB3O60242 1522 aa25.15■■□□□ 1.62
USP49-202ENST00000373010 MYOM1P52179 1685 aa25.15■■□□□ 1.62
USP49-202ENST00000373010 RNF123Q5XPI4 1314 aa25.14■■□□□ 1.62
USP49-202ENST00000373010 NOS1P29475 1434 aa25.14■■□□□ 1.62
USP49-202ENST00000373010 RBM19Q9Y4C8 960 aaKnown RBP25.13■■□□□ 1.61
USP49-202ENST00000373010 NRXN1Q9ULB1 1477 aa25.12■■□□□ 1.61
USP49-202ENST00000373010 ABCC3O15438 1527 aa25.12■■□□□ 1.61
USP49-202ENST00000373010 KDM5AP29375 1690 aaKnown RBP25.11■■□□□ 1.61
USP49-202ENST00000373010 AMER1Q5JTC6 1135 aaPredicted RBP25.11■■□□□ 1.61
USP49-202ENST00000373010 DIP2CQ9Y2E4 1556 aa25.09■■□□□ 1.61
USP49-202ENST00000373010 ERVK-7P63135 1459 aa25.08■■□□□ 1.61
USP49-202ENST00000373010 PPLO60437 1756 aa25.08■■□□□ 1.6
USP49-202ENST00000373010 CAMSAP1Q5T5Y3 1602 aa25.07■■□□□ 1.6
USP49-202ENST00000373010 BLMP54132 1417 aaPredicted RBP25.07■■□□□ 1.6
USP49-202ENST00000373010 PPP2R1AP30153 589 aa25.07■■□□□ 1.6
USP49-202ENST00000373010 ASXL1Q8IXJ9 1541 aa25.06■■□□□ 1.6
USP49-202ENST00000373010 SIGLEC1Q9BZZ2 1709 aa25.06■■□□□ 1.6
USP49-202ENST00000373010 RICTORQ6R327 1708 aa25.06■■□□□ 1.6
USP49-202ENST00000373010 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
USP49-202ENST00000373010 INSRP06213 1382 aa25.03■■□□□ 1.6
USP49-202ENST00000373010 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
USP49-202ENST00000373010 MYO3AQ8NEV4 1616 aa25.02■■□□□ 1.6
USP49-202ENST00000373010 PIK3C2GO75747 1445 aa25.02■■□□□ 1.6
USP49-202ENST00000373010 CDCA7LQ96GN5 454 aa25.02■■□□□ 1.6
USP49-202ENST00000373010 SETBP1Q9Y6X0 1596 aa25.01■■□□□ 1.59
USP49-202ENST00000373010 PDE3BQ13370 1112 aa25.01■■□□□ 1.59
USP49-202ENST00000373010 ADAMTS8Q9UP79 889 aa25.01■■□□□ 1.59
USP49-202ENST00000373010 YEATS2Q9ULM3 1422 aa25■■□□□ 1.59
USP49-202ENST00000373010 C14orf93Q9H972 538 aaKnown RBP25■■□□□ 1.59
USP49-202ENST00000373010 TRAK1Q9UPV9 953 aa24.99■■□□□ 1.59
USP49-202ENST00000373010 SLC24A1O60721 1099 aa24.98■■□□□ 1.59
USP49-202ENST00000373010 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
USP49-202ENST00000373010 TMEM132EQ6IEE7 984 aa24.97■■□□□ 1.59
USP49-202ENST00000373010 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
USP49-202ENST00000373010 RCAN3Q9UKA8 241 aa24.97■■□□□ 1.59
USP49-202ENST00000373010 NPC1L1Q9UHC9 1359 aa24.97■■□□□ 1.59
USP49-202ENST00000373010 RPGRIP1LQ68CZ1 1315 aa24.96■■□□□ 1.59
USP49-202ENST00000373010 PIK3C2BO00750 1634 aa24.96■■□□□ 1.59
USP49-202ENST00000373010 ADGRB1O14514 1584 aa24.96■■□□□ 1.59
USP49-202ENST00000373010 CARD14Q9BXL6 1004 aa24.95■■□□□ 1.59
USP49-202ENST00000373010 SBNO2Q9Y2G9 1366 aa24.95■■□□□ 1.58
USP49-202ENST00000373010 RRP1P56182 461 aaKnown RBP24.95■■□□□ 1.58
USP49-202ENST00000373010 WDR43Q15061 677 aaKnown RBP eCLIP24.94■■□□□ 1.58
USP49-202ENST00000373010 QRICH2Q9H0J4 1663 aa24.93■■□□□ 1.58
USP49-202ENST00000373010 ZC3H13Q5T200 1668 aaKnown RBP24.93■■□□□ 1.58
USP49-202ENST00000373010 GLI2P10070 1586 aa24.92■■□□□ 1.58
USP49-202ENST00000373010 CCDC136Q96JN2 1154 aa24.92■■□□□ 1.58
USP49-202ENST00000373010 ARHGAP31Q2M1Z3 1444 aa24.9■■□□□ 1.58
USP49-202ENST00000373010 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
USP49-202ENST00000373010 RIMBP3CA6NJZ7 1639 aa24.89■■□□□ 1.58
USP49-202ENST00000373010 RIMBP3BA6NNM3 1639 aa24.89■■□□□ 1.58
USP49-202ENST00000373010 RIMBP3Q9UFD9 1639 aa24.89■■□□□ 1.58
USP49-202ENST00000373010 IDI1Q13907 227 aa24.89■■□□□ 1.58
USP49-202ENST00000373010 FAM69CQ0P6D2 419 aa24.88■■□□□ 1.57
USP49-202ENST00000373010 VGFO15240 615 aaPredicted RBP24.86■■□□□ 1.57
USP49-202ENST00000373010 PLEKHH1Q9ULM0 1364 aa24.85■■□□□ 1.57
USP49-202ENST00000373010 EXOC6Q8TAG9 804 aa24.85■■□□□ 1.57
USP49-202ENST00000373010 MYO5BQ9ULV0 1848 aa24.84■■□□□ 1.57
USP49-202ENST00000373010 SLC12A5Q9H2X9 1139 aa24.84■■□□□ 1.57
USP49-202ENST00000373010 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
USP49-202ENST00000373010 TSPOAP1O95153 1857 aa24.84■■□□□ 1.57
USP49-202ENST00000373010 DIP2BQ9P265 1576 aa24.82■■□□□ 1.56
USP49-202ENST00000373010 PREX1Q8TCU6 1659 aa24.82■■□□□ 1.56
USP49-202ENST00000373010 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
USP49-202ENST00000373010 ARHGEF28Q8N1W1 1705 aaKnown RBP24.81■■□□□ 1.56
USP49-202ENST00000373010 NSD3Q9BZ95 1437 aa24.81■■□□□ 1.56
USP49-202ENST00000373010 SLC52A1Q9NWF4 448 aa24.8■■□□□ 1.56
USP49-202ENST00000373010 PLIN1O60240 522 aa24.78■■□□□ 1.56
USP49-202ENST00000373010 ZNF521Q96K83 1311 aa24.77■■□□□ 1.56
USP49-202ENST00000373010 FBXO31Q5XUX0 539 aaPredicted RBP24.77■■□□□ 1.56
USP49-202ENST00000373010 TMEM131LA2VDJ0 1609 aa24.76■■□□□ 1.55
USP49-202ENST00000373010 TULP4Q9NRJ4 1543 aa24.75■■□□□ 1.55
USP49-202ENST00000373010 SAFB2Q14151 953 aaKnown RBP eCLIP24.74■■□□□ 1.55
USP49-202ENST00000373010 ZFYVE9O95405 1425 aa24.74■■□□□ 1.55
USP49-202ENST00000373010 FANCIQ9NVI1 1328 aa24.74■■□□□ 1.55
USP49-202ENST00000373010 DUSP27Q5VZP5 1158 aa24.73■■□□□ 1.55
USP49-202ENST00000373010 STK26Q9P289 416 aa24.73■■□□□ 1.55
USP49-202ENST00000373010 EVC2Q86UK5 1308 aa24.73■■□□□ 1.55
USP49-202ENST00000373010 TNNT2P45379 298 aaPredicted RBP24.73■■□□□ 1.55
USP49-202ENST00000373010 GOLGA2Q08379 1002 aa24.73■■□□□ 1.55
USP49-202ENST00000373010 MORC1Q86VD1 984 aa24.73■■□□□ 1.55
USP49-202ENST00000373010 APAF1O14727 1248 aa24.72■■□□□ 1.55
USP49-202ENST00000373010 MSH5O43196 834 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms