RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.47
TRERF1-204ENST00000372922 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.47
TRERF1-204ENST00000372922 ATP6V1DQ9Y5K8 247 aa12.15□□□□□ -0.47
TRERF1-204ENST00000372922 NGEFQ8N5V2 710 aa12.14□□□□□ -0.47
TRERF1-204ENST00000372922 E9PSI1 815 aa12.14□□□□□ -0.47
TRERF1-204ENST00000372922 ANKRD45Q5TZF3 282 aa12.14□□□□□ -0.47
TRERF1-204ENST00000372922 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
TRERF1-204ENST00000372922 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
TRERF1-204ENST00000372922 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
TRERF1-204ENST00000372922 ST20-MTHFSA0A0A6YYL1 179 aa12.13□□□□□ -0.47
TRERF1-204ENST00000372922 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
TRERF1-204ENST00000372922 ZNF526Q8TF50 670 aaPredicted RBP12.13□□□□□ -0.47
TRERF1-204ENST00000372922 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
TRERF1-204ENST00000372922 ELL2O00472 640 aaPredicted RBP12.13□□□□□ -0.47
TRERF1-204ENST00000372922 TRIM29Q14134 588 aa12.13□□□□□ -0.47
TRERF1-204ENST00000372922 RAD21O60216 631 aa12.13□□□□□ -0.47
TRERF1-204ENST00000372922 WIZO95785 1651 aa12.12□□□□□ -0.47
TRERF1-204ENST00000372922 TPM1P09493 284 aa12.12□□□□□ -0.47
TRERF1-204ENST00000372922 ATF3P18847 181 aa12.11□□□□□ -0.47
TRERF1-204ENST00000372922 CENPQQ7L2Z9 268 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-204ENST00000372922 CCDC47Q96A33 483 aaKnown RBP12.11□□□□□ -0.47
TRERF1-204ENST00000372922 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
TRERF1-204ENST00000372922 DIAPH1O60610 1272 aaKnown RBP12.11□□□□□ -0.47
TRERF1-204ENST00000372922 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
TRERF1-204ENST00000372922 ROCK1Q13464 1354 aa12.1□□□□□ -0.47
TRERF1-204ENST00000372922 GOLGA6L19H0YKK7 550 aa12.1□□□□□ -0.47
TRERF1-204ENST00000372922 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
TRERF1-204ENST00000372922 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
TRERF1-204ENST00000372922 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
TRERF1-204ENST00000372922 CWC22Q9HCG8 908 aaKnown RBP12.1□□□□□ -0.47
TRERF1-204ENST00000372922 ZKSCAN1P17029 563 aaPredicted RBP12.09□□□□□ -0.47
TRERF1-204ENST00000372922 IPO9Q96P70 1041 aaKnown RBP12.09□□□□□ -0.47
TRERF1-204ENST00000372922 TRDNQ13061 729 aa12.09□□□□□ -0.47
TRERF1-204ENST00000372922 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
TRERF1-204ENST00000372922 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.48
TRERF1-204ENST00000372922 DHX16O60231 1041 aaKnown RBP12.08□□□□□ -0.48
TRERF1-204ENST00000372922 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRERF1-204ENST00000372922 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
TRERF1-204ENST00000372922 BECN2A8MW95 431 aa12.08□□□□□ -0.48
TRERF1-204ENST00000372922 RBM33Q96EV2 1170 aaKnown RBP12.08□□□□□ -0.48
TRERF1-204ENST00000372922 ERICH2A1L162 156 aa12.07□□□□□ -0.48
TRERF1-204ENST00000372922 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
TRERF1-204ENST00000372922 REC8O95072 547 aa12.07□□□□□ -0.48
TRERF1-204ENST00000372922 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
TRERF1-204ENST00000372922 CPLX1O14810 134 aa12.07□□□□□ -0.48
TRERF1-204ENST00000372922 RNF20Q5VTR2 975 aa12.07□□□□□ -0.48
TRERF1-204ENST00000372922 DDX19BQ9UMR2 479 aa12.07□□□□□ -0.48
TRERF1-204ENST00000372922 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
TRERF1-204ENST00000372922 CCDC70Q6NSX1 233 aa12.06□□□□□ -0.48
TRERF1-204ENST00000372922 HOOK1Q9UJC3 728 aaKnown RBP12.06□□□□□ -0.48
TRERF1-204ENST00000372922 FAM13BQ9NYF5 915 aa12.06□□□□□ -0.48
TRERF1-204ENST00000372922 ANKRD20A12PQ8NF67 263 aa12.06□□□□□ -0.48
TRERF1-204ENST00000372922 USP47Q96K76 1375 aa12.06□□□□□ -0.48
TRERF1-204ENST00000372922 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
TRERF1-204ENST00000372922 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
TRERF1-204ENST00000372922 RIPK4P57078 832 aa12.05□□□□□ -0.48
TRERF1-204ENST00000372922 WASHC2AQ641Q2 1341 aa12.05□□□□□ -0.48
TRERF1-204ENST00000372922 SKOR2Q2VWA4 1001 aaPredicted RBP12.05□□□□□ -0.48
TRERF1-204ENST00000372922 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
TRERF1-204ENST00000372922 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
TRERF1-204ENST00000372922 CCDC43Q96MW1 224 aaKnown RBP12.05□□□□□ -0.48
TRERF1-204ENST00000372922 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
TRERF1-204ENST00000372922 HSP90AB4PQ58FF6 505 aa12.05□□□□□ -0.48
TRERF1-204ENST00000372922 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
TRERF1-204ENST00000372922 PCMTD1Q96MG8 357 aaPredicted RBP12.04□□□□□ -0.48
TRERF1-204ENST00000372922 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
TRERF1-204ENST00000372922 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
TRERF1-204ENST00000372922 STK11IPQ8N1F8 1099 aa12.04□□□□□ -0.48
TRERF1-204ENST00000372922 CNKSR2Q8WXI2 1034 aa12.04□□□□□ -0.48
TRERF1-204ENST00000372922 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
TRERF1-204ENST00000372922 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
TRERF1-204ENST00000372922 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
TRERF1-204ENST00000372922 IPO7O95373 1038 aaKnown RBP12.03□□□□□ -0.48
TRERF1-204ENST00000372922 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
TRERF1-204ENST00000372922 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.48
TRERF1-204ENST00000372922 ERC2O15083 957 aa12.02□□□□□ -0.49
TRERF1-204ENST00000372922 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.49
TRERF1-204ENST00000372922 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
TRERF1-204ENST00000372922 GNAI1P63096 354 aa12.02□□□□□ -0.49
TRERF1-204ENST00000372922 APAF1O14727 1248 aa12.01□□□□□ -0.49
TRERF1-204ENST00000372922 RUNDC1Q96C34 613 aa12.01□□□□□ -0.49
TRERF1-204ENST00000372922 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
TRERF1-204ENST00000372922 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
TRERF1-204ENST00000372922 DZIP1LQ8IYY4 767 aaKnown RBP12.01□□□□□ -0.49
TRERF1-204ENST00000372922 PLCD4Q9BRC7 762 aa12.01□□□□□ -0.49
TRERF1-204ENST00000372922 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
TRERF1-204ENST00000372922 SAFBQ15424 915 aaKnown RBP eCLIP12□□□□□ -0.49
TRERF1-204ENST00000372922 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
TRERF1-204ENST00000372922 FOXD4L6Q3SYB3 417 aaPredicted RBP12□□□□□ -0.49
TRERF1-204ENST00000372922 FOXD4L3Q6VB84 417 aaPredicted RBP12□□□□□ -0.49
TRERF1-204ENST00000372922 CCAR2Q8N163 923 aaKnown RBP12□□□□□ -0.49
TRERF1-204ENST00000372922 CRBNQ96SW2 442 aa12□□□□□ -0.49
TRERF1-204ENST00000372922 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
TRERF1-204ENST00000372922 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
TRERF1-204ENST00000372922 PLIN1O60240 522 aa11.99□□□□□ -0.49
TRERF1-204ENST00000372922 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
TRERF1-204ENST00000372922 GPS2Q13227 327 aa11.99□□□□□ -0.49
TRERF1-204ENST00000372922 GPRASP1Q5JY77 1395 aa11.98□□□□□ -0.49
TRERF1-204ENST00000372922 PRKRIP1Q9H875 184 aaPredicted RBP11.98□□□□□ -0.49
TRERF1-204ENST00000372922 INTS3Q68E01 1043 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms