RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 ADGRF5Q8IZF2 1346 aa24.38■■□□□ 1.49
CTSA-204ENST00000372484 RALBP1Q15311 655 aa24.37■■□□□ 1.49
CTSA-204ENST00000372484 CFAP70Q5T0N1 1121 aa24.35■■□□□ 1.49
CTSA-204ENST00000372484 EIF3AQ14152 1382 aaKnown RBP24.35■■□□□ 1.49
CTSA-204ENST00000372484 ZC3H13Q5T200 1668 aaKnown RBP24.34■■□□□ 1.49
CTSA-204ENST00000372484 PER1O15534 1290 aaPredicted RBP24.34■■□□□ 1.49
CTSA-204ENST00000372484 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
CTSA-204ENST00000372484 MYBBP1AQ9BQG0 1328 aaKnown RBP24.34■■□□□ 1.49
CTSA-204ENST00000372484 ZMYM4Q5VZL5 1548 aa24.33■■□□□ 1.49
CTSA-204ENST00000372484 SIGLEC1Q9BZZ2 1709 aa24.33■■□□□ 1.49
CTSA-204ENST00000372484 NRXN1Q9ULB1 1477 aa24.32■■□□□ 1.48
CTSA-204ENST00000372484 FKBP8Q14318 412 aa24.32■■□□□ 1.48
CTSA-204ENST00000372484 NOS1P29475 1434 aa24.32■■□□□ 1.48
CTSA-204ENST00000372484 NEFLP07196 543 aa24.32■■□□□ 1.48
CTSA-204ENST00000372484 ZBED9Q6R2W3 1325 aa24.31■■□□□ 1.48
CTSA-204ENST00000372484 PANK3Q9H999 370 aa24.31■■□□□ 1.48
CTSA-204ENST00000372484 PPLO60437 1756 aa24.31■■□□□ 1.48
CTSA-204ENST00000372484 CDCA8Q53HL2 280 aa24.29■■□□□ 1.48
CTSA-204ENST00000372484 ARHGAP31Q2M1Z3 1444 aa24.29■■□□□ 1.48
CTSA-204ENST00000372484 BRD4O60885 1362 aaPredicted RBP24.29■■□□□ 1.48
CTSA-204ENST00000372484 PARD3Q8TEW0 1356 aa24.29■■□□□ 1.48
CTSA-204ENST00000372484 PNISRQ8TF01 805 aaKnown RBP24.28■■□□□ 1.48
CTSA-204ENST00000372484 SYNMO15061 1565 aa24.27■■□□□ 1.48
CTSA-204ENST00000372484 PIK3C2BO00750 1634 aa24.27■■□□□ 1.48
CTSA-204ENST00000372484 RPGRIP1LQ68CZ1 1315 aa24.25■■□□□ 1.47
CTSA-204ENST00000372484 PIK3C2GO75747 1445 aa24.23■■□□□ 1.47
CTSA-204ENST00000372484 NLRP13Q86W25 1043 aa24.23■■□□□ 1.47
CTSA-204ENST00000372484 SETBP1Q9Y6X0 1596 aa24.22■■□□□ 1.47
CTSA-204ENST00000372484 CC2D1BQ5T0F9 858 aaKnown RBP24.22■■□□□ 1.47
CTSA-204ENST00000372484 SLC24A1O60721 1099 aa24.22■■□□□ 1.47
CTSA-204ENST00000372484 KDM5AP29375 1690 aaKnown RBP24.2■■□□□ 1.46
CTSA-204ENST00000372484 BCANQ96GW7 911 aa24.19■■□□□ 1.46
CTSA-204ENST00000372484 C14orf93Q9H972 538 aaKnown RBP24.19■■□□□ 1.46
CTSA-204ENST00000372484 LRPPRCP42704 1394 aaKnown RBP24.18■■□□□ 1.46
CTSA-204ENST00000372484 PREX1Q8TCU6 1659 aa24.18■■□□□ 1.46
CTSA-204ENST00000372484 KIF13AQ9H1H9 1805 aa24.18■■□□□ 1.46
CTSA-204ENST00000372484 IDI1Q13907 227 aa24.17■■□□□ 1.46
CTSA-204ENST00000372484 MYO3AQ8NEV4 1616 aa24.17■■□□□ 1.46
CTSA-204ENST00000372484 SLC52A1Q9NWF4 448 aa24.17■■□□□ 1.46
CTSA-204ENST00000372484 MYOM1P52179 1685 aa24.17■■□□□ 1.46
CTSA-204ENST00000372484 REREQ9P2R6 1566 aa24.17■■□□□ 1.46
CTSA-204ENST00000372484 KNSTRNQ9Y448 316 aa24.16■■□□□ 1.46
CTSA-204ENST00000372484 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
CTSA-204ENST00000372484 VGFO15240 615 aaPredicted RBP24.15■■□□□ 1.46
CTSA-204ENST00000372484 ERVK-7P63135 1459 aa24.15■■□□□ 1.46
CTSA-204ENST00000372484 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.46
CTSA-204ENST00000372484 ADGRB1O14514 1584 aa24.14■■□□□ 1.45
CTSA-204ENST00000372484 AGLP35573 1532 aa24.13■■□□□ 1.45
CTSA-204ENST00000372484 NUTM2DQ5VT03 806 aaPredicted RBP24.13■■□□□ 1.45
CTSA-204ENST00000372484 SBNO2Q9Y2G9 1366 aa24.12■■□□□ 1.45
CTSA-204ENST00000372484 CENPJQ9HC77 1338 aaPredicted RBP24.12■■□□□ 1.45
CTSA-204ENST00000372484 TRAK1Q9UPV9 953 aa24.12■■□□□ 1.45
CTSA-204ENST00000372484 MYO5BQ9ULV0 1848 aa24.11■■□□□ 1.45
CTSA-204ENST00000372484 TMEM132EQ6IEE7 984 aa24.11■■□□□ 1.45
CTSA-204ENST00000372484 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
CTSA-204ENST00000372484 TMEM131LA2VDJ0 1609 aa24.08■■□□□ 1.45
CTSA-204ENST00000372484 QRICH2Q9H0J4 1663 aa24.08■■□□□ 1.45
CTSA-204ENST00000372484 AMER1Q5JTC6 1135 aaPredicted RBP24.08■■□□□ 1.45
CTSA-204ENST00000372484 FBXO31Q5XUX0 539 aaPredicted RBP24.08■■□□□ 1.45
CTSA-204ENST00000372484 ASXL1Q8IXJ9 1541 aa24.07■■□□□ 1.44
CTSA-204ENST00000372484 CLTCQ00610 1675 aaKnown RBP24.06■■□□□ 1.44
CTSA-204ENST00000372484 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
CTSA-204ENST00000372484 ZFYVE9O95405 1425 aa24.05■■□□□ 1.44
CTSA-204ENST00000372484 SMG6Q86US8 1419 aaKnown RBP24.05■■□□□ 1.44
CTSA-204ENST00000372484 ARHGEF40Q8TER5 1519 aa24.04■■□□□ 1.44
CTSA-204ENST00000372484 IRX6P78412 446 aaPredicted RBP24.02■■□□□ 1.44
CTSA-204ENST00000372484 NPC1L1Q9UHC9 1359 aa24.02■■□□□ 1.44
CTSA-204ENST00000372484 MLECQ14165 292 aa24.01■■□□□ 1.43
CTSA-204ENST00000372484 NUDCQ9Y266 331 aa24.01■■□□□ 1.43
CTSA-204ENST00000372484 ARHGEF28Q8N1W1 1705 aaKnown RBP24■■□□□ 1.43
CTSA-204ENST00000372484 PPP2R1AP30153 589 aa23.99■■□□□ 1.43
CTSA-204ENST00000372484 STAG3Q9UJ98 1225 aa23.98■■□□□ 1.43
CTSA-204ENST00000372484 INSRP06213 1382 aa23.96■■□□□ 1.43
CTSA-204ENST00000372484 CARD14Q9BXL6 1004 aa23.95■■□□□ 1.42
CTSA-204ENST00000372484 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
CTSA-204ENST00000372484 SPATA31D1Q6ZQQ2 1576 aa23.95■■□□□ 1.42
CTSA-204ENST00000372484 ERICH6BQ5W0A0 696 aa23.94■■□□□ 1.42
CTSA-204ENST00000372484 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
CTSA-204ENST00000372484 ESF1Q9H501 851 aaKnown RBP23.92■■□□□ 1.42
CTSA-204ENST00000372484 SALL2Q9Y467 1007 aaPredicted RBP23.91■■□□□ 1.42
CTSA-204ENST00000372484 EVC2Q86UK5 1308 aa23.91■■□□□ 1.42
CTSA-204ENST00000372484 STK26Q9P289 416 aa23.9■■□□□ 1.42
CTSA-204ENST00000372484 SLC12A5Q9H2X9 1139 aa23.9■■□□□ 1.42
CTSA-204ENST00000372484 TULP4Q9NRJ4 1543 aa23.88■■□□□ 1.41
CTSA-204ENST00000372484 WDR43Q15061 677 aaKnown RBP eCLIP23.88■■□□□ 1.41
CTSA-204ENST00000372484 ADAMTS8Q9UP79 889 aa23.88■■□□□ 1.41
CTSA-204ENST00000372484 PUS7Q96PZ0 661 aaKnown RBP23.87■■□□□ 1.41
CTSA-204ENST00000372484 A2ML1A8K2U0 1454 aa23.87■■□□□ 1.41
CTSA-204ENST00000372484 SAFB2Q14151 953 aaKnown RBP eCLIP23.87■■□□□ 1.41
CTSA-204ENST00000372484 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
CTSA-204ENST00000372484 NSD3Q9BZ95 1437 aa23.86■■□□□ 1.41
CTSA-204ENST00000372484 PDE3BQ13370 1112 aa23.86■■□□□ 1.41
CTSA-204ENST00000372484 ZMYM3Q14202 1370 aa23.85■■□□□ 1.41
CTSA-204ENST00000372484 YTHDC2Q9H6S0 1430 aaKnown RBP23.85■■□□□ 1.41
CTSA-204ENST00000372484 PTPRMP28827 1452 aa23.84■■□□□ 1.41
CTSA-204ENST00000372484 PPP4R2Q9NY27 417 aa23.83■■□□□ 1.41
CTSA-204ENST00000372484 RNF123Q5XPI4 1314 aa23.82■■□□□ 1.4
CTSA-204ENST00000372484 RIMS2Q9UQ26 1411 aa23.82■■□□□ 1.4
CTSA-204ENST00000372484 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
CTSA-204ENST00000372484 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms