RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 IFT172Q9UG01 1749 aa21.38■■□□□ 1.01
YIPF3-202ENST00000372422 NEXMIFQ5QGS0 1516 aa21.37■■□□□ 1.01
YIPF3-202ENST00000372422 MYO5BQ9ULV0 1848 aa21.37■■□□□ 1.01
YIPF3-202ENST00000372422 THEMISQ8N1K5 641 aaPredicted RBP21.37■■□□□ 1.01
YIPF3-202ENST00000372422 CEP170BQ9Y4F5 1589 aaPredicted RBP21.37■■□□□ 1.01
YIPF3-202ENST00000372422 PPLO60437 1756 aa21.37■■□□□ 1.01
YIPF3-202ENST00000372422 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
YIPF3-202ENST00000372422 NBPF8Q3BBV2 869 aa21.36■■□□□ 1.01
YIPF3-202ENST00000372422 ZFYVE9O95405 1425 aa21.35■■□□□ 1.01
YIPF3-202ENST00000372422 RIMS2Q9UQ26 1411 aa21.35■■□□□ 1.01
YIPF3-202ENST00000372422 TMEM2Q9UHN6 1383 aa21.34■■□□□ 1.01
YIPF3-202ENST00000372422 ZNF142P52746 1687 aaPredicted RBP21.34■■□□□ 1.01
YIPF3-202ENST00000372422 NRXN1Q9ULB1 1477 aa21.32■■□□□ 1
YIPF3-202ENST00000372422 ADGRF5Q8IZF2 1346 aa21.32■■□□□ 1
YIPF3-202ENST00000372422 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
YIPF3-202ENST00000372422 EID1Q9Y6B2 187 aa21.31■■□□□ 1
YIPF3-202ENST00000372422 NUTM2DQ5VT03 806 aaPredicted RBP21.3■■□□□ 1
YIPF3-202ENST00000372422 PIK3C2GO75747 1445 aa21.29■■□□□ 1
YIPF3-202ENST00000372422 SLIT1O75093 1534 aa21.29■■□□□ 1
YIPF3-202ENST00000372422 ROCK2O75116 1388 aaKnown RBP21.28■■□□□ 1
YIPF3-202ENST00000372422 ARHGAP23Q9P227 1491 aa21.27■■□□□ 1
YIPF3-202ENST00000372422 TRPM1Q7Z4N2 1603 aa21.27■■□□□ 1
YIPF3-202ENST00000372422 KIAA1210Q9ULL0 1709 aa21.25■□□□□ 0.99
YIPF3-202ENST00000372422 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
YIPF3-202ENST00000372422 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
YIPF3-202ENST00000372422 LAMC1P11047 1609 aa21.23■□□□□ 0.99
YIPF3-202ENST00000372422 C14orf93Q9H972 538 aaKnown RBP21.23■□□□□ 0.99
YIPF3-202ENST00000372422 GPRASP1Q5JY77 1395 aa21.22■□□□□ 0.99
YIPF3-202ENST00000372422 CFAP70Q5T0N1 1121 aa21.22■□□□□ 0.99
YIPF3-202ENST00000372422 ANKLE2Q86XL3 938 aa21.22■□□□□ 0.99
YIPF3-202ENST00000372422 SCAF11Q99590 1463 aaKnown RBP21.22■□□□□ 0.99
YIPF3-202ENST00000372422 BCANQ96GW7 911 aa21.21■□□□□ 0.99
YIPF3-202ENST00000372422 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
YIPF3-202ENST00000372422 LTKP29376 864 aa21.2■□□□□ 0.98
YIPF3-202ENST00000372422 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
YIPF3-202ENST00000372422 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
YIPF3-202ENST00000372422 SETBP1Q9Y6X0 1596 aa21.18■□□□□ 0.98
YIPF3-202ENST00000372422 USP47Q96K76 1375 aa21.15■□□□□ 0.98
YIPF3-202ENST00000372422 ALKQ9UM73 1620 aa21.15■□□□□ 0.98
YIPF3-202ENST00000372422 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
YIPF3-202ENST00000372422 LMTK3Q96Q04 1460 aa21.13■□□□□ 0.97
YIPF3-202ENST00000372422 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
YIPF3-202ENST00000372422 ADGRB1O14514 1584 aa21.12■□□□□ 0.97
YIPF3-202ENST00000372422 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
YIPF3-202ENST00000372422 NRXN3Q9Y4C0 1643 aa21.11■□□□□ 0.97
YIPF3-202ENST00000372422 HSPA5P11021 654 aaKnown RBP21.11■□□□□ 0.97
YIPF3-202ENST00000372422 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
YIPF3-202ENST00000372422 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
YIPF3-202ENST00000372422 DIP2AQ14689 1571 aa21.1■□□□□ 0.97
YIPF3-202ENST00000372422 ADAMTS13Q76LX8 1427 aa21.09■□□□□ 0.97
YIPF3-202ENST00000372422 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
YIPF3-202ENST00000372422 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
YIPF3-202ENST00000372422 NPHP4O75161 1426 aaPredicted RBP21.08■□□□□ 0.96
YIPF3-202ENST00000372422 MED14O60244 1454 aa21.08■□□□□ 0.96
YIPF3-202ENST00000372422 HSPA2P54652 639 aa21.06■□□□□ 0.96
YIPF3-202ENST00000372422 SLC26A8Q96RN1 970 aa21.06■□□□□ 0.96
YIPF3-202ENST00000372422 ASXL1Q8IXJ9 1541 aa21.06■□□□□ 0.96
YIPF3-202ENST00000372422 SETD1AO15047 1707 aaKnown RBP21.06■□□□□ 0.96
YIPF3-202ENST00000372422 YTHDC2Q9H6S0 1430 aaKnown RBP21.06■□□□□ 0.96
YIPF3-202ENST00000372422 NCKAP5LQ9HCH0 1330 aa21.06■□□□□ 0.96
YIPF3-202ENST00000372422 TRAK1Q9UPV9 953 aa21.05■□□□□ 0.96
YIPF3-202ENST00000372422 METP08581 1390 aa21.04■□□□□ 0.96
YIPF3-202ENST00000372422 LRPPRCP42704 1394 aaKnown RBP21.04■□□□□ 0.96
YIPF3-202ENST00000372422 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
YIPF3-202ENST00000372422 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
YIPF3-202ENST00000372422 PIK3R4Q99570 1358 aa21.03■□□□□ 0.96
YIPF3-202ENST00000372422 SLC24A1O60721 1099 aa21.02■□□□□ 0.96
YIPF3-202ENST00000372422 STK26Q9P289 416 aa21.02■□□□□ 0.96
YIPF3-202ENST00000372422 ABCC11Q96J66 1382 aa21.01■□□□□ 0.95
YIPF3-202ENST00000372422 CENPJQ9HC77 1338 aaPredicted RBP20.99■□□□□ 0.95
YIPF3-202ENST00000372422 DLC1Q96QB1 1528 aa20.99■□□□□ 0.95
YIPF3-202ENST00000372422 TECPR2O15040 1411 aa20.98■□□□□ 0.95
YIPF3-202ENST00000372422 POGKQ9P215 609 aa20.97■□□□□ 0.95
YIPF3-202ENST00000372422 KNDC1Q76NI1 1749 aa20.96■□□□□ 0.95
YIPF3-202ENST00000372422 ARHGEF28Q8N1W1 1705 aaKnown RBP20.96■□□□□ 0.95
YIPF3-202ENST00000372422 SIRT1Q96EB6 747 aa20.96■□□□□ 0.95
YIPF3-202ENST00000372422 AMOTL2Q9Y2J4 779 aa20.95■□□□□ 0.94
YIPF3-202ENST00000372422 SBNO2Q9Y2G9 1366 aa20.94■□□□□ 0.94
YIPF3-202ENST00000372422 TMF1P82094 1093 aa20.94■□□□□ 0.94
YIPF3-202ENST00000372422 PRAM1Q96QH2 718 aa20.94■□□□□ 0.94
YIPF3-202ENST00000372422 TESK2Q96S53 571 aa20.94■□□□□ 0.94
YIPF3-202ENST00000372422 FAM135BQ49AJ0 1406 aa20.94■□□□□ 0.94
YIPF3-202ENST00000372422 CPS1P31327 1500 aa20.93■□□□□ 0.94
YIPF3-202ENST00000372422 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
YIPF3-202ENST00000372422 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
YIPF3-202ENST00000372422 PTPRUQ92729 1446 aa20.93■□□□□ 0.94
YIPF3-202ENST00000372422 STRCQ7RTU9 1775 aa20.92■□□□□ 0.94
YIPF3-202ENST00000372422 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
YIPF3-202ENST00000372422 CDCA8Q53HL2 280 aa20.91■□□□□ 0.94
YIPF3-202ENST00000372422 QRICH2Q9H0J4 1663 aa20.91■□□□□ 0.94
YIPF3-202ENST00000372422 XRN1Q8IZH2 1706 aaKnown RBP20.89■□□□□ 0.94
YIPF3-202ENST00000372422 KCNA6P17658 529 aa20.89■□□□□ 0.93
YIPF3-202ENST00000372422 ROBO2Q9HCK4 1378 aa20.88■□□□□ 0.93
YIPF3-202ENST00000372422 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
YIPF3-202ENST00000372422 CHD2O14647 1828 aaKnown RBP20.87■□□□□ 0.93
YIPF3-202ENST00000372422 WAPLQ7Z5K2 1190 aa20.87■□□□□ 0.93
YIPF3-202ENST00000372422 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
YIPF3-202ENST00000372422 CCDC7Q96M83 1385 aa20.87■□□□□ 0.93
YIPF3-202ENST00000372422 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
YIPF3-202ENST00000372422 C11orf95C9JLR9 678 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms