RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ZMYM4Q5VZL5 1548 aa27.73■■■□□ 2.03
VEGFA-204ENST00000372064 INSRP06213 1382 aa27.72■■■□□ 2.03
VEGFA-204ENST00000372064 SYNMO15061 1565 aa27.71■■■□□ 2.03
VEGFA-204ENST00000372064 FRMPD1Q5SYB0 1578 aa27.71■■■□□ 2.03
VEGFA-204ENST00000372064 HECW2Q9P2P5 1572 aa27.69■■■□□ 2.02
VEGFA-204ENST00000372064 ABCA6Q8N139 1617 aa27.69■■■□□ 2.02
VEGFA-204ENST00000372064 MROH2AA6NES4 1674 aa27.68■■■□□ 2.02
VEGFA-204ENST00000372064 EIF3AQ14152 1382 aaKnown RBP27.68■■■□□ 2.02
VEGFA-204ENST00000372064 ADGRF5Q8IZF2 1346 aa27.67■■■□□ 2.02
VEGFA-204ENST00000372064 RBM19Q9Y4C8 960 aaKnown RBP27.67■■■□□ 2.02
VEGFA-204ENST00000372064 NRXN1Q9ULB1 1477 aa27.67■■■□□ 2.02
VEGFA-204ENST00000372064 GGT6Q6P531 493 aa27.67■■■□□ 2.02
VEGFA-204ENST00000372064 CDCA8Q53HL2 280 aa27.66■■■□□ 2.02
VEGFA-204ENST00000372064 CFAP70Q5T0N1 1121 aa27.66■■■□□ 2.02
VEGFA-204ENST00000372064 MYOM1P52179 1685 aa27.65■■■□□ 2.02
VEGFA-204ENST00000372064 ADGRB3O60242 1522 aa27.64■■■□□ 2.02
VEGFA-204ENST00000372064 BLMP54132 1417 aaPredicted RBP27.63■■■□□ 2.01
VEGFA-204ENST00000372064 RAPGEF3O95398 923 aa27.62■■■□□ 2.01
VEGFA-204ENST00000372064 NPATQ14207 1427 aa27.61■■■□□ 2.01
VEGFA-204ENST00000372064 NEO1Q92859 1461 aa27.6■■■□□ 2.01
VEGFA-204ENST00000372064 KDM5AP29375 1690 aaKnown RBP27.59■■■□□ 2.01
VEGFA-204ENST00000372064 CHGAP10645 457 aaKnown RBP27.59■■■□□ 2.01
VEGFA-204ENST00000372064 MYO3AQ8NEV4 1616 aa27.57■■■□□ 2
VEGFA-204ENST00000372064 PDE3BQ13370 1112 aa27.57■■■□□ 2
VEGFA-204ENST00000372064 B4GALNT3Q6L9W6 998 aa27.57■■■□□ 2
VEGFA-204ENST00000372064 KNSTRNQ9Y448 316 aa27.57■■■□□ 2
VEGFA-204ENST00000372064 AMER1Q5JTC6 1135 aaPredicted RBP27.56■■■□□ 2
VEGFA-204ENST00000372064 SALL2Q9Y467 1007 aaPredicted RBP27.56■■■□□ 2
VEGFA-204ENST00000372064 ASXL1Q8IXJ9 1541 aa27.56■■■□□ 2
VEGFA-204ENST00000372064 SLC24A1O60721 1099 aa27.55■■■□□ 2
VEGFA-204ENST00000372064 SETBP1Q9Y6X0 1596 aa27.55■■■□□ 2
VEGFA-204ENST00000372064 ABCC3O15438 1527 aa27.55■■■□□ 2
VEGFA-204ENST00000372064 CFAP65Q6ZU64 1925 aaKnown RBP27.55■■■□□ 2
VEGFA-204ENST00000372064 NOS1P29475 1434 aa27.54■■■□□ 2
VEGFA-204ENST00000372064 NPC1L1Q9UHC9 1359 aa27.54■■■□□ 2
VEGFA-204ENST00000372064 ERVK-7P63135 1459 aa27.53■■■□□ 2
VEGFA-204ENST00000372064 PPLO60437 1756 aa27.52■■■□□ 2
VEGFA-204ENST00000372064 CAMSAP1Q5T5Y3 1602 aa27.5■■□□□ 1.99
VEGFA-204ENST00000372064 MYT1Q01538 1121 aa27.5■■□□□ 1.99
VEGFA-204ENST00000372064 SBNO2Q9Y2G9 1366 aa27.49■■□□□ 1.99
VEGFA-204ENST00000372064 DIP2CQ9Y2E4 1556 aa27.49■■□□□ 1.99
VEGFA-204ENST00000372064 PPP2R1AP30153 589 aa27.48■■□□□ 1.99
VEGFA-204ENST00000372064 PIK3C2GO75747 1445 aa27.48■■□□□ 1.99
VEGFA-204ENST00000372064 CYB5RLQ6IPT4 315 aa27.46■■□□□ 1.99
VEGFA-204ENST00000372064 RICTORQ6R327 1708 aa27.46■■□□□ 1.99
VEGFA-204ENST00000372064 PIK3C2BO00750 1634 aa27.44■■□□□ 1.98
VEGFA-204ENST00000372064 SIGLEC1Q9BZZ2 1709 aa27.44■■□□□ 1.98
VEGFA-204ENST00000372064 RPGRIP1LQ68CZ1 1315 aa27.43■■□□□ 1.98
VEGFA-204ENST00000372064 RRP1P56182 461 aaKnown RBP27.43■■□□□ 1.98
VEGFA-204ENST00000372064 ADGRB1O14514 1584 aa27.43■■□□□ 1.98
VEGFA-204ENST00000372064 RCAN3Q9UKA8 241 aa27.42■■□□□ 1.98
VEGFA-204ENST00000372064 ZC3H13Q5T200 1668 aaKnown RBP27.41■■□□□ 1.98
VEGFA-204ENST00000372064 C14orf93Q9H972 538 aaKnown RBP27.4■■□□□ 1.98
VEGFA-204ENST00000372064 YEATS2Q9ULM3 1422 aa27.4■■□□□ 1.98
VEGFA-204ENST00000372064 ADAMTS8Q9UP79 889 aa27.4■■□□□ 1.98
VEGFA-204ENST00000372064 CDCA7LQ96GN5 454 aa27.4■■□□□ 1.98
VEGFA-204ENST00000372064 TRAK1Q9UPV9 953 aa27.39■■□□□ 1.98
VEGFA-204ENST00000372064 CENPJQ9HC77 1338 aaPredicted RBP27.39■■□□□ 1.97
VEGFA-204ENST00000372064 ARHGAP31Q2M1Z3 1444 aa27.38■■□□□ 1.97
VEGFA-204ENST00000372064 GLI2P10070 1586 aa27.37■■□□□ 1.97
VEGFA-204ENST00000372064 TMEM132EQ6IEE7 984 aa27.37■■□□□ 1.97
VEGFA-204ENST00000372064 CCDC136Q96JN2 1154 aa27.36■■□□□ 1.97
VEGFA-204ENST00000372064 FANCIQ9NVI1 1328 aa27.36■■□□□ 1.97
VEGFA-204ENST00000372064 QRICH2Q9H0J4 1663 aa27.35■■□□□ 1.97
VEGFA-204ENST00000372064 CARD14Q9BXL6 1004 aa27.34■■□□□ 1.97
VEGFA-204ENST00000372064 NUTM2DQ5VT03 806 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-204ENST00000372064 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.978e-10■□□□□ 9.2
VEGFA-204ENST00000372064 NEXMIFQ5QGS0 1516 aa27.32■■□□□ 1.96
VEGFA-204ENST00000372064 IDI1Q13907 227 aa27.29■■□□□ 1.96
VEGFA-204ENST00000372064 ANP32EQ9BTT0 268 aa27.29■■□□□ 1.96
VEGFA-204ENST00000372064 FAM69CQ0P6D2 419 aa27.28■■□□□ 1.96
VEGFA-204ENST00000372064 ZNF521Q96K83 1311 aa27.27■■□□□ 1.96
VEGFA-204ENST00000372064 PLEKHH1Q9ULM0 1364 aa27.27■■□□□ 1.96
VEGFA-204ENST00000372064 VGFO15240 615 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-204ENST00000372064 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
VEGFA-204ENST00000372064 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
VEGFA-204ENST00000372064 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
VEGFA-204ENST00000372064 EXOC6Q8TAG9 804 aa27.23■■□□□ 1.95
VEGFA-204ENST00000372064 ARHGEF28Q8N1W1 1705 aaKnown RBP27.23■■□□□ 1.95
VEGFA-204ENST00000372064 ZFYVE9O95405 1425 aa27.23■■□□□ 1.95
VEGFA-204ENST00000372064 SLC12A5Q9H2X9 1139 aa27.22■■□□□ 1.95
VEGFA-204ENST00000372064 SLC52A1Q9NWF4 448 aa27.22■■□□□ 1.95
VEGFA-204ENST00000372064 USP32Q8NFA0 1604 aa27.22■■□□□ 1.95
VEGFA-204ENST00000372064 PREX1Q8TCU6 1659 aa27.2■■□□□ 1.95
VEGFA-204ENST00000372064 MSH5O43196 834 aa27.19■■□□□ 1.94
VEGFA-204ENST00000372064 PUS7Q96PZ0 661 aaKnown RBP27.19■■□□□ 1.94
VEGFA-204ENST00000372064 DIP2BQ9P265 1576 aa27.19■■□□□ 1.94
VEGFA-204ENST00000372064 NSD3Q9BZ95 1437 aa27.18■■□□□ 1.94
VEGFA-204ENST00000372064 DUSP27Q5VZP5 1158 aa27.17■■□□□ 1.94
VEGFA-204ENST00000372064 SENP3Q9H4L4 574 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-204ENST00000372064 POLR3AO14802 1390 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-204ENST00000372064 CCDC146Q8IYE0 955 aa27.17■■□□□ 1.94
VEGFA-204ENST00000372064 TMEM131LA2VDJ0 1609 aa27.16■■□□□ 1.94
VEGFA-204ENST00000372064 TULP4Q9NRJ4 1543 aa27.15■■□□□ 1.94
VEGFA-204ENST00000372064 FBXO31Q5XUX0 539 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-204ENST00000372064 GOLGA2Q08379 1002 aa27.14■■□□□ 1.94
VEGFA-204ENST00000372064 PLIN1O60240 522 aa27.13■■□□□ 1.93
VEGFA-204ENST00000372064 MYO5BQ9ULV0 1848 aa27.13■■□□□ 1.93
VEGFA-204ENST00000372064 TSPOAP1O95153 1857 aa27.12■■□□□ 1.93
VEGFA-204ENST00000372064 REREQ9P2R6 1566 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms