RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 ADGRF5Q8IZF2 1346 aa31.47■■■□□ 2.63
TTC39A-203ENST00000371747 IQGAP1P46940 1657 aa31.46■■■□□ 2.63
TTC39A-203ENST00000371747 TESK2Q96S53 571 aa31.46■■■□□ 2.63
TTC39A-203ENST00000371747 NRXN1Q9ULB1 1477 aa31.45■■■□□ 2.62
TTC39A-203ENST00000371747 PRKRIP1Q9H875 184 aaPredicted RBP31.44■■■□□ 2.62
TTC39A-203ENST00000371747 CLTCQ00610 1675 aaKnown RBP31.43■■■□□ 2.62
TTC39A-203ENST00000371747 PPLO60437 1756 aa31.42■■■□□ 2.62
TTC39A-203ENST00000371747 PREX1Q8TCU6 1659 aa31.41■■■□□ 2.62
TTC39A-203ENST00000371747 SCAF11Q99590 1463 aaKnown RBP31.41■■■□□ 2.62
TTC39A-203ENST00000371747 SCAF1Q9H7N4 1312 aaKnown RBP31.41■■■□□ 2.62
TTC39A-203ENST00000371747 RPGRIP1LQ68CZ1 1315 aa31.4■■■□□ 2.62
TTC39A-203ENST00000371747 CFAP70Q5T0N1 1121 aa31.39■■■□□ 2.62
TTC39A-203ENST00000371747 SLC52A1Q9NWF4 448 aa31.38■■■□□ 2.61
TTC39A-203ENST00000371747 IDI1Q13907 227 aa31.36■■■□□ 2.61
TTC39A-203ENST00000371747 FBXO31Q5XUX0 539 aaPredicted RBP31.36■■■□□ 2.61
TTC39A-203ENST00000371747 DISP3Q9P2K9 1392 aa31.36■■■□□ 2.61
TTC39A-203ENST00000371747 TMF1P82094 1093 aa31.33■■■□□ 2.61
TTC39A-203ENST00000371747 PIK3C2GO75747 1445 aa31.32■■■□□ 2.6
TTC39A-203ENST00000371747 ERVK-7P63135 1459 aa31.31■■■□□ 2.6
TTC39A-203ENST00000371747 EIF3AQ14152 1382 aaKnown RBP31.29■■■□□ 2.6
TTC39A-203ENST00000371747 NEXMIFQ5QGS0 1516 aa31.29■■■□□ 2.6
TTC39A-203ENST00000371747 ZMYM3Q14202 1370 aa31.28■■■□□ 2.6
TTC39A-203ENST00000371747 SETBP1Q9Y6X0 1596 aa31.27■■■□□ 2.6
TTC39A-203ENST00000371747 ESF1Q9H501 851 aaKnown RBP31.27■■■□□ 2.6
TTC39A-203ENST00000371747 C14orf93Q9H972 538 aaKnown RBP31.26■■■□□ 2.59
TTC39A-203ENST00000371747 TMEM131LA2VDJ0 1609 aa31.25■■■□□ 2.59
TTC39A-203ENST00000371747 CCDC184Q52MB2 194 aa31.25■■■□□ 2.59
TTC39A-203ENST00000371747 GTF3C3Q9Y5Q9 886 aa31.24■■■□□ 2.59
TTC39A-203ENST00000371747 VGFO15240 615 aaPredicted RBP31.23■■■□□ 2.59
TTC39A-203ENST00000371747 MYO5BQ9ULV0 1848 aa31.23■■■□□ 2.59
TTC39A-203ENST00000371747 SPATA31D1Q6ZQQ2 1576 aa31.22■■■□□ 2.59
TTC39A-203ENST00000371747 ZFYVE9O95405 1425 aa31.19■■■□□ 2.58
TTC39A-203ENST00000371747 NUTM2DQ5VT03 806 aaPredicted RBP31.18■■■□□ 2.58
TTC39A-203ENST00000371747 ADGRB1O14514 1584 aa31.18■■■□□ 2.58
TTC39A-203ENST00000371747 MRS2Q9HD23 443 aa31.17■■■□□ 2.58
TTC39A-203ENST00000371747 CNGB1Q14028 1251 aaPredicted RBP31.16■■■□□ 2.58
TTC39A-203ENST00000371747 CDCA8Q53HL2 280 aa31.16■■■□□ 2.58
TTC39A-203ENST00000371747 MYO3AQ8NEV4 1616 aa31.15■■■□□ 2.58
TTC39A-203ENST00000371747 PER1O15534 1290 aaPredicted RBP31.14■■■□□ 2.58
TTC39A-203ENST00000371747 SLC24A1O60721 1099 aa31.13■■■□□ 2.57
TTC39A-203ENST00000371747 KTN1Q86UP2 1357 aaKnown RBP31.11■■■□□ 2.57
TTC39A-203ENST00000371747 PANK3Q9H999 370 aa31.11■■■□□ 2.57
TTC39A-203ENST00000371747 TMEM132EQ6IEE7 984 aa31.1■■■□□ 2.57
TTC39A-203ENST00000371747 FER1L4A9Z1Z3 1794 aa31.09■■■□□ 2.57
TTC39A-203ENST00000371747 STAG3Q9UJ98 1225 aa31.08■■■□□ 2.57
TTC39A-203ENST00000371747 TRAK1Q9UPV9 953 aa31.08■■■□□ 2.57
TTC39A-203ENST00000371747 SBNO2Q9Y2G9 1366 aa31.08■■■□□ 2.57
TTC39A-203ENST00000371747 RALBP1Q15311 655 aa31.08■■■□□ 2.57
TTC39A-203ENST00000371747 CEBPAP49715 358 aaPredicted RBP31.07■■■□□ 2.56
TTC39A-203ENST00000371747 CENPJQ9HC77 1338 aaPredicted RBP31.06■■■□□ 2.56
TTC39A-203ENST00000371747 KDM5AP29375 1690 aaKnown RBP31.05■■■□□ 2.56
TTC39A-203ENST00000371747 A2ML1A8K2U0 1454 aa31.04■■■□□ 2.56
TTC39A-203ENST00000371747 C3P01024 1663 aa31.03■■■□□ 2.56
TTC39A-203ENST00000371747 FAM9BQ8IZU0 186 aa31.03■■■□□ 2.56
TTC39A-203ENST00000371747 TNRQ92752 1358 aa31.02■■■□□ 2.56
TTC39A-203ENST00000371747 PARD3Q8TEW0 1356 aa31.01■■■□□ 2.55
TTC39A-203ENST00000371747 MYOM1P52179 1685 aa31.01■■■□□ 2.55
TTC39A-203ENST00000371747 MYBBP1AQ9BQG0 1328 aaKnown RBP31.01■■■□□ 2.55
TTC39A-203ENST00000371747 HNRNPUQ00839 825 aaKnown RBP eCLIP31.01■■■□□ 2.55
TTC39A-203ENST00000371747 QRICH2Q9H0J4 1663 aa30.99■■■□□ 2.55
TTC39A-203ENST00000371747 ASXL1Q8IXJ9 1541 aa30.97■■■□□ 2.55
TTC39A-203ENST00000371747 ARHGEF28Q8N1W1 1705 aaKnown RBP30.96■■■□□ 2.55
TTC39A-203ENST00000371747 BRD4O60885 1362 aaPredicted RBP30.94■■■□□ 2.54
TTC39A-203ENST00000371747 RIMS2Q9UQ26 1411 aa30.94■■■□□ 2.54
TTC39A-203ENST00000371747 CC2D1BQ5T0F9 858 aaKnown RBP30.93■■■□□ 2.54
TTC39A-203ENST00000371747 TMC1Q8TDI8 760 aa30.93■■■□□ 2.54
TTC39A-203ENST00000371747 SENP3Q9H4L4 574 aaPredicted RBP30.93■■■□□ 2.54
TTC39A-203ENST00000371747 PLPPR3Q6T4P5 718 aa30.92■■■□□ 2.54
TTC39A-203ENST00000371747 ALKQ9UM73 1620 aa30.92■■■□□ 2.54
TTC39A-203ENST00000371747 ADAMTSL3P82987 1691 aa30.91■■■□□ 2.54
TTC39A-203ENST00000371747 KNSTRNQ9Y448 316 aa30.9■■■□□ 2.54
TTC39A-203ENST00000371747 PNISRQ8TF01 805 aaKnown RBP30.89■■■□□ 2.53
TTC39A-203ENST00000371747 RIMS1Q86UR5 1692 aaKnown RBP30.88■■■□□ 2.53
TTC39A-203ENST00000371747 NLRP13Q86W25 1043 aa30.88■■■□□ 2.53
TTC39A-203ENST00000371747 UBR1Q8IWV7 1749 aa30.87■■■□□ 2.53
TTC39A-203ENST00000371747 STK26Q9P289 416 aa30.86■■■□□ 2.53
TTC39A-203ENST00000371747 YTHDC2Q9H6S0 1430 aaKnown RBP30.85■■■□□ 2.53
TTC39A-203ENST00000371747 AMER1Q5JTC6 1135 aaPredicted RBP30.85■■■□□ 2.53
TTC39A-203ENST00000371747 NLRP1Q9C000 1473 aa30.85■■■□□ 2.53
TTC39A-203ENST00000371747 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.83■■■□□ 2.53
TTC39A-203ENST00000371747 PTPRMP28827 1452 aa30.81■■■□□ 2.52
TTC39A-203ENST00000371747 PUS7Q96PZ0 661 aaKnown RBP30.8■■■□□ 2.52
TTC39A-203ENST00000371747 TULP4Q9NRJ4 1543 aa30.8■■■□□ 2.52
TTC39A-203ENST00000371747 NPC1L1Q9UHC9 1359 aa30.8■■■□□ 2.52
TTC39A-203ENST00000371747 EVC2Q86UK5 1308 aa30.79■■■□□ 2.52
TTC39A-203ENST00000371747 SETD1AO15047 1707 aaKnown RBP30.79■■■□□ 2.52
TTC39A-203ENST00000371747 LRPPRCP42704 1394 aaKnown RBP30.78■■■□□ 2.52
TTC39A-203ENST00000371747 ZBED9Q6R2W3 1325 aa30.77■■■□□ 2.52
TTC39A-203ENST00000371747 TMEM2Q9UHN6 1383 aa30.76■■■□□ 2.52
TTC39A-203ENST00000371747 HDGFP51858 240 aaKnown RBP30.76■■■□□ 2.52
TTC39A-203ENST00000371747 SAFB2Q14151 953 aaKnown RBP eCLIP30.76■■■□□ 2.51
TTC39A-203ENST00000371747 CARD14Q9BXL6 1004 aa30.76■■■□□ 2.51
TTC39A-203ENST00000371747 NRXN3Q9Y4C0 1643 aa30.75■■■□□ 2.51
TTC39A-203ENST00000371747 PRAM1Q96QH2 718 aa30.74■■■□□ 2.51
TTC39A-203ENST00000371747 SLC12A5Q9H2X9 1139 aa30.72■■■□□ 2.51
TTC39A-203ENST00000371747 POGKQ9P215 609 aa30.72■■■□□ 2.51
TTC39A-203ENST00000371747 DLC1Q96QB1 1528 aa30.7■■■□□ 2.51
TTC39A-203ENST00000371747 PPP2R1AP30153 589 aa30.68■■■□□ 2.5
TTC39A-203ENST00000371747 LTKP29376 864 aa30.67■■■□□ 2.5
TTC39A-203ENST00000371747 CABP2Q9NPB3 220 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms