RNA–Protein interactions for RNA: ENST00000371520.5

ECHDC2-202, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 1,606 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-202ENST00000371520 A2ML1A8K2U0 1454 aa28.32■■■□□ 2.12
ECHDC2-202ENST00000371520 NLRP1Q9C000 1473 aa28.32■■■□□ 2.12
ECHDC2-202ENST00000371520 UBR1Q8IWV7 1749 aa28.31■■■□□ 2.12
ECHDC2-202ENST00000371520 MYO3AQ8NEV4 1616 aa28.28■■■□□ 2.12
ECHDC2-202ENST00000371520 GPRASP1Q5JY77 1395 aa28.28■■■□□ 2.12
ECHDC2-202ENST00000371520 ROCK2O75116 1388 aaKnown RBP28.27■■■□□ 2.12
ECHDC2-202ENST00000371520 ZFYVE9O95405 1425 aa28.26■■■□□ 2.12
ECHDC2-202ENST00000371520 ADGRF5Q8IZF2 1346 aa28.26■■■□□ 2.11
ECHDC2-202ENST00000371520 PIK3C2GO75747 1445 aa28.25■■■□□ 2.11
ECHDC2-202ENST00000371520 STAG3Q9UJ98 1225 aa28.25■■■□□ 2.11
ECHDC2-202ENST00000371520 EIF4G2P78344 907 aaKnown RBP eCLIP28.24■■■□□ 2.11
ECHDC2-202ENST00000371520 CARD11Q9BXL7 1154 aa28.21■■■□□ 2.11
ECHDC2-202ENST00000371520 USP47Q96K76 1375 aa28.2■■■□□ 2.1
ECHDC2-202ENST00000371520 VGFO15240 615 aaPredicted RBP28.2■■■□□ 2.1
ECHDC2-202ENST00000371520 HSPA5P11021 654 aaKnown RBP28.2■■■□□ 2.1
ECHDC2-202ENST00000371520 NBPF1Q3BBV0 1214 aa28.19■■■□□ 2.1
ECHDC2-202ENST00000371520 IQGAP1P46940 1657 aa28.18■■■□□ 2.1
ECHDC2-202ENST00000371520 PLPPR3Q6T4P5 718 aa28.18■■■□□ 2.1
ECHDC2-202ENST00000371520 PTPRMP28827 1452 aa28.18■■■□□ 2.1
ECHDC2-202ENST00000371520 RIMS2Q9UQ26 1411 aa28.18■■■□□ 2.1
ECHDC2-202ENST00000371520 SETD1BQ9UPS6 1966 aaKnown RBP28.17■■■□□ 2.1
ECHDC2-202ENST00000371520 ZNF142P52746 1687 aaPredicted RBP28.17■■■□□ 2.1
ECHDC2-202ENST00000371520 SETBP1Q9Y6X0 1596 aa28.17■■■□□ 2.1
ECHDC2-202ENST00000371520 HIRIP3Q9BW71 556 aaPredicted RBP28.16■■■□□ 2.1
ECHDC2-202ENST00000371520 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
ECHDC2-202ENST00000371520 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
ECHDC2-202ENST00000371520 NUTM2DQ5VT03 806 aaPredicted RBP28.12■■■□□ 2.09
ECHDC2-202ENST00000371520 TMEM2Q9UHN6 1383 aa28.12■■■□□ 2.09
ECHDC2-202ENST00000371520 CFAP70Q5T0N1 1121 aa28.11■■■□□ 2.09
ECHDC2-202ENST00000371520 ADGRB1O14514 1584 aa28.1■■■□□ 2.09
ECHDC2-202ENST00000371520 C14orf93Q9H972 538 aaKnown RBP28.1■■■□□ 2.09
ECHDC2-202ENST00000371520 SLIT1O75093 1534 aa28.1■■■□□ 2.09
ECHDC2-202ENST00000371520 SCAF11Q99590 1463 aaKnown RBP28.08■■■□□ 2.09
ECHDC2-202ENST00000371520 ARHGAP23Q9P227 1491 aa28.08■■■□□ 2.09
ECHDC2-202ENST00000371520 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.07■■■□□ 2.08
ECHDC2-202ENST00000371520 NRXN3Q9Y4C0 1643 aa28.06■■■□□ 2.08
ECHDC2-202ENST00000371520 SETD1AO15047 1707 aaKnown RBP28.06■■■□□ 2.08
ECHDC2-202ENST00000371520 ALKQ9UM73 1620 aa28.04■■■□□ 2.08
ECHDC2-202ENST00000371520 ASXL1Q8IXJ9 1541 aa28.04■■■□□ 2.08
ECHDC2-202ENST00000371520 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
ECHDC2-202ENST00000371520 THEMISQ8N1K5 641 aaPredicted RBP28.01■■■□□ 2.07
ECHDC2-202ENST00000371520 ST20-MTHFSA0A0A6YYL1 179 aa28■■■□□ 2.07
ECHDC2-202ENST00000371520 EIF3AQ14152 1382 aaKnown RBP27.97■■■□□ 2.07
ECHDC2-202ENST00000371520 DIEXFQ68CQ4 756 aaKnown RBP27.96■■■□□ 2.07
ECHDC2-202ENST00000371520 ARHGEF28Q8N1W1 1705 aaKnown RBP27.95■■■□□ 2.07
ECHDC2-202ENST00000371520 PLEKHG1Q9ULL1 1385 aa27.95■■■□□ 2.07
ECHDC2-202ENST00000371520 WASHC2AQ641Q2 1341 aa27.94■■■□□ 2.06
ECHDC2-202ENST00000371520 LTKP29376 864 aa27.94■■■□□ 2.06
ECHDC2-202ENST00000371520 KDM4FA0A1W2PPD8 638 aa27.93■■■□□ 2.06
ECHDC2-202ENST00000371520 C11orf95C9JLR9 678 aaPredicted RBP27.92■■■□□ 2.06
ECHDC2-202ENST00000371520 TMEM132EQ6IEE7 984 aa27.92■■■□□ 2.06
ECHDC2-202ENST00000371520 EID1Q9Y6B2 187 aa27.92■■■□□ 2.06
ECHDC2-202ENST00000371520 CCDC7Q96M83 1385 aa27.92■■■□□ 2.06
ECHDC2-202ENST00000371520 TXNDC2Q86VQ3 553 aa27.91■■■□□ 2.06
ECHDC2-202ENST00000371520 TESK2Q96S53 571 aa27.9■■■□□ 2.06
ECHDC2-202ENST00000371520 SENP3Q9H4L4 574 aaPredicted RBP27.9■■■□□ 2.06
ECHDC2-202ENST00000371520 QRICH2Q9H0J4 1663 aa27.89■■■□□ 2.05
ECHDC2-202ENST00000371520 ADAMTS13Q76LX8 1427 aa27.88■■■□□ 2.05
ECHDC2-202ENST00000371520 KIF7Q2M1P5 1343 aa27.88■■■□□ 2.05
ECHDC2-202ENST00000371520 YTHDC2Q9H6S0 1430 aaKnown RBP27.88■■■□□ 2.05
ECHDC2-202ENST00000371520 MED14O60244 1454 aa27.86■■■□□ 2.05
ECHDC2-202ENST00000371520 DIP2AQ14689 1571 aa27.86■■■□□ 2.05
ECHDC2-202ENST00000371520 KNDC1Q76NI1 1749 aa27.85■■■□□ 2.05
ECHDC2-202ENST00000371520 TRAK1Q9UPV9 953 aa27.85■■■□□ 2.05
ECHDC2-202ENST00000371520 SBNO2Q9Y2G9 1366 aa27.84■■■□□ 2.05
ECHDC2-202ENST00000371520 DDX10Q13206 875 aaKnown RBP27.82■■■□□ 2.04
ECHDC2-202ENST00000371520 DLC1Q96QB1 1528 aa27.82■■■□□ 2.04
ECHDC2-202ENST00000371520 METP08581 1390 aa27.81■■■□□ 2.04
ECHDC2-202ENST00000371520 LRPPRCP42704 1394 aaKnown RBP27.81■■■□□ 2.04
ECHDC2-202ENST00000371520 DISP3Q9P2K9 1392 aa27.81■■■□□ 2.04
ECHDC2-202ENST00000371520 CENPJQ9HC77 1338 aaPredicted RBP27.81■■■□□ 2.04
ECHDC2-202ENST00000371520 BCANQ96GW7 911 aa27.79■■■□□ 2.04
ECHDC2-202ENST00000371520 ANKLE2Q86XL3 938 aa27.78■■■□□ 2.04
ECHDC2-202ENST00000371520 TMF1P82094 1093 aa27.78■■■□□ 2.04
ECHDC2-202ENST00000371520 ABCC11Q96J66 1382 aa27.76■■■□□ 2.04
ECHDC2-202ENST00000371520 CPS1P31327 1500 aa27.76■■■□□ 2.03
ECHDC2-202ENST00000371520 STK26Q9P289 416 aa27.76■■■□□ 2.03
ECHDC2-202ENST00000371520 TECPR2O15040 1411 aa27.76■■■□□ 2.03
ECHDC2-202ENST00000371520 SLC24A1O60721 1099 aa27.75■■■□□ 2.03
ECHDC2-202ENST00000371520 TBX22Q9Y458 520 aa27.74■■■□□ 2.03
ECHDC2-202ENST00000371520 SLC26A8Q96RN1 970 aa27.71■■■□□ 2.03
ECHDC2-202ENST00000371520 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
ECHDC2-202ENST00000371520 XRN1Q8IZH2 1706 aaKnown RBP27.69■■■□□ 2.02
ECHDC2-202ENST00000371520 POLR3GLQ9BT43 218 aa27.69■■■□□ 2.02
ECHDC2-202ENST00000371520 NPHP4O75161 1426 aaPredicted RBP27.68■■■□□ 2.02
ECHDC2-202ENST00000371520 FAM135BQ49AJ0 1406 aa27.68■■■□□ 2.02
ECHDC2-202ENST00000371520 MYOM1P52179 1685 aa27.68■■■□□ 2.02
ECHDC2-202ENST00000371520 PTPRUQ92729 1446 aa27.67■■■□□ 2.02
ECHDC2-202ENST00000371520 CDCA8Q53HL2 280 aa27.67■■■□□ 2.02
ECHDC2-202ENST00000371520 PRAM1Q96QH2 718 aa27.67■■■□□ 2.02
ECHDC2-202ENST00000371520 TULP4Q9NRJ4 1543 aa27.67■■■□□ 2.02
ECHDC2-202ENST00000371520 PIK3R4Q99570 1358 aa27.67■■■□□ 2.02
ECHDC2-202ENST00000371520 SIRT1Q96EB6 747 aa27.65■■■□□ 2.02
ECHDC2-202ENST00000371520 CHD2O14647 1828 aaKnown RBP27.65■■■□□ 2.02
ECHDC2-202ENST00000371520 POGKQ9P215 609 aa27.64■■■□□ 2.02
ECHDC2-202ENST00000371520 PLEKHH1Q9ULM0 1364 aa27.62■■■□□ 2.01
ECHDC2-202ENST00000371520 PTCH1Q13635 1447 aa27.62■■■□□ 2.01
ECHDC2-202ENST00000371520 ROBO2Q9HCK4 1378 aa27.6■■■□□ 2.01
ECHDC2-202ENST00000371520 NCKAP5LQ9HCH0 1330 aa27.6■■■□□ 2.01
ECHDC2-202ENST00000371520 SAFB2Q14151 953 aaKnown RBP eCLIP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms