RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MLH3Q9UHC1 1453 aa38.79■■■■□ 3.8
SSBP3-204ENST00000371320 MAP3K4Q9Y6R4 1608 aa38.78■■■■□ 3.8
SSBP3-204ENST00000371320 KIF1BO60333 1816 aa38.78■■■■□ 3.8
SSBP3-204ENST00000371320 KNSTRNQ9Y448 316 aa38.78■■■■□ 3.8
SSBP3-204ENST00000371320 CFAP70Q5T0N1 1121 aa38.75■■■■□ 3.79
SSBP3-204ENST00000371320 ADGRF5Q8IZF2 1346 aa38.75■■■■□ 3.79
SSBP3-204ENST00000371320 SYNMO15061 1565 aa38.73■■■■□ 3.79
SSBP3-204ENST00000371320 INSRP06213 1382 aa38.73■■■■□ 3.79
SSBP3-204ENST00000371320 HECW2Q9P2P5 1572 aa38.71■■■■□ 3.79
SSBP3-204ENST00000371320 FRMPD1Q5SYB0 1578 aa38.7■■■■□ 3.79
SSBP3-204ENST00000371320 ABCA6Q8N139 1617 aa38.7■■■■□ 3.79
SSBP3-204ENST00000371320 PDE3BQ13370 1112 aa38.7■■■■□ 3.79
SSBP3-204ENST00000371320 SALL2Q9Y467 1007 aaPredicted RBP38.7■■■■□ 3.79
SSBP3-204ENST00000371320 ZMYM4Q5VZL5 1548 aa38.69■■■■□ 3.78
SSBP3-204ENST00000371320 GGT6Q6P531 493 aa38.69■■■■□ 3.78
SSBP3-204ENST00000371320 SLC24A1O60721 1099 aa38.68■■■■□ 3.78
SSBP3-204ENST00000371320 RIMBP3CA6NJZ7 1639 aa38.67■■■■□ 3.78
SSBP3-204ENST00000371320 RIMBP3BA6NNM3 1639 aa38.67■■■■□ 3.78
SSBP3-204ENST00000371320 RIMBP3Q9UFD9 1639 aa38.67■■■■□ 3.78
SSBP3-204ENST00000371320 MROH2AA6NES4 1674 aa38.67■■■■□ 3.78
SSBP3-204ENST00000371320 IFT172Q9UG01 1749 aa38.66■■■■□ 3.78
SSBP3-204ENST00000371320 AMER1Q5JTC6 1135 aaPredicted RBP38.66■■■■□ 3.78
SSBP3-204ENST00000371320 BLMP54132 1417 aaPredicted RBP38.66■■■■□ 3.78
SSBP3-204ENST00000371320 NPATQ14207 1427 aa38.64■■■■□ 3.78
SSBP3-204ENST00000371320 CYB5RLQ6IPT4 315 aa38.64■■■■□ 3.78
SSBP3-204ENST00000371320 NRXN1Q9ULB1 1477 aa38.64■■■■□ 3.78
SSBP3-204ENST00000371320 CHGAP10645 457 aaKnown RBP38.63■■■■□ 3.77
SSBP3-204ENST00000371320 ADGRB3O60242 1522 aa38.63■■■■□ 3.77
SSBP3-204ENST00000371320 NEO1Q92859 1461 aa38.62■■■■□ 3.77
SSBP3-204ENST00000371320 MYT1Q01538 1121 aa38.62■■■■□ 3.77
SSBP3-204ENST00000371320 PPP2R1AP30153 589 aa38.61■■■■□ 3.77
SSBP3-204ENST00000371320 ASXL1Q8IXJ9 1541 aa38.6■■■■□ 3.77
SSBP3-204ENST00000371320 NOS1P29475 1434 aa38.59■■■■□ 3.77
SSBP3-204ENST00000371320 KDM5AP29375 1690 aaKnown RBP38.59■■■■□ 3.77
SSBP3-204ENST00000371320 MYOM1P52179 1685 aa38.58■■■■□ 3.77
SSBP3-204ENST00000371320 RAPGEF3O95398 923 aa38.56■■■■□ 3.76
SSBP3-204ENST00000371320 RCAN3Q9UKA8 241 aa38.56■■■■□ 3.76
SSBP3-204ENST00000371320 ERVK-7P63135 1459 aa38.54■■■■□ 3.76
SSBP3-204ENST00000371320 NPC1L1Q9UHC9 1359 aa38.54■■■■□ 3.76
SSBP3-204ENST00000371320 ABCC3O15438 1527 aa38.54■■■■□ 3.76
SSBP3-204ENST00000371320 CCDC136Q96JN2 1154 aa38.53■■■■□ 3.76
SSBP3-204ENST00000371320 RRP1P56182 461 aaKnown RBP38.52■■■■□ 3.76
SSBP3-204ENST00000371320 ADAMTS8Q9UP79 889 aa38.51■■■■□ 3.76
SSBP3-204ENST00000371320 CDCA7LQ96GN5 454 aa38.5■■■■□ 3.75
SSBP3-204ENST00000371320 SETBP1Q9Y6X0 1596 aa38.48■■■■□ 3.75
SSBP3-204ENST00000371320 WDR43Q15061 677 aaKnown RBP eCLIP38.48■■■■□ 3.75
SSBP3-204ENST00000371320 CFAP65Q6ZU64 1925 aaKnown RBP38.47■■■■□ 3.75
SSBP3-204ENST00000371320 SBNO2Q9Y2G9 1366 aa38.47■■■■□ 3.75
SSBP3-204ENST00000371320 RPGRIP1LQ68CZ1 1315 aa38.46■■■■□ 3.75
SSBP3-204ENST00000371320 MYO3AQ8NEV4 1616 aa38.45■■■■□ 3.75
SSBP3-204ENST00000371320 PIK3C2GO75747 1445 aa38.45■■■■□ 3.75
SSBP3-204ENST00000371320 C14orf93Q9H972 538 aaKnown RBP38.45■■■■□ 3.75
SSBP3-204ENST00000371320 CENPJQ9HC77 1338 aaPredicted RBP38.44■■■■□ 3.74
SSBP3-204ENST00000371320 PPLO60437 1756 aa38.43■■■■□ 3.74
SSBP3-204ENST00000371320 DIP2CQ9Y2E4 1556 aa38.42■■■■□ 3.74
SSBP3-204ENST00000371320 CAMSAP1Q5T5Y3 1602 aa38.42■■■■□ 3.74
SSBP3-204ENST00000371320 TRAK1Q9UPV9 953 aa38.39■■■■□ 3.74
SSBP3-204ENST00000371320 FANCIQ9NVI1 1328 aa38.38■■■■□ 3.73
SSBP3-204ENST00000371320 CARD14Q9BXL6 1004 aa38.35■■■■□ 3.73
SSBP3-204ENST00000371320 ANP32EQ9BTT0 268 aa38.34■■■■□ 3.73
SSBP3-204ENST00000371320 ADGRB1O14514 1584 aa38.33■■■■□ 3.73
SSBP3-204ENST00000371320 RICTORQ6R327 1708 aa38.33■■■■□ 3.73
SSBP3-204ENST00000371320 SIGLEC1Q9BZZ2 1709 aa38.32■■■■□ 3.72
SSBP3-204ENST00000371320 TMEM132EQ6IEE7 984 aa38.31■■■■□ 3.72
SSBP3-204ENST00000371320 EXOC6Q8TAG9 804 aa38.31■■■■□ 3.72
SSBP3-204ENST00000371320 ARHGAP31Q2M1Z3 1444 aa38.29■■■■□ 3.72
SSBP3-204ENST00000371320 PIK3C2BO00750 1634 aa38.28■■■■□ 3.72
SSBP3-204ENST00000371320 VGFO15240 615 aaPredicted RBP38.27■■■■□ 3.72
SSBP3-204ENST00000371320 YEATS2Q9ULM3 1422 aa38.26■■■■□ 3.72
SSBP3-204ENST00000371320 PLEKHH1Q9ULM0 1364 aa38.25■■■■□ 3.71
SSBP3-204ENST00000371320 QRICH2Q9H0J4 1663 aa38.24■■■■□ 3.71
SSBP3-204ENST00000371320 ZC3H13Q5T200 1668 aaKnown RBP38.23■■■■□ 3.71
SSBP3-204ENST00000371320 NUTM2DQ5VT03 806 aaPredicted RBP38.21■■■■□ 3.71
SSBP3-204ENST00000371320 GLI2P10070 1586 aa38.2■■■■□ 3.71
SSBP3-204ENST00000371320 NEXMIFQ5QGS0 1516 aa38.2■■■■□ 3.71
SSBP3-204ENST00000371320 ZNF521Q96K83 1311 aa38.2■■■■□ 3.71
SSBP3-204ENST00000371320 IDI1Q13907 227 aa38.19■■■■□ 3.7
SSBP3-204ENST00000371320 MSH5O43196 834 aa38.18■■■■□ 3.7
SSBP3-204ENST00000371320 SLC52A1Q9NWF4 448 aa38.17■■■■□ 3.7
SSBP3-204ENST00000371320 GOLGA2Q08379 1002 aa38.16■■■■□ 3.7
SSBP3-204ENST00000371320 SLC12A5Q9H2X9 1139 aa38.16■■■■□ 3.7
SSBP3-204ENST00000371320 NSD3Q9BZ95 1437 aa38.15■■■■□ 3.7
SSBP3-204ENST00000371320 PLIN1O60240 522 aa38.15■■■■□ 3.7
SSBP3-204ENST00000371320 CCDC146Q8IYE0 955 aa38.15■■■■□ 3.7
SSBP3-204ENST00000371320 DUSP27Q5VZP5 1158 aa38.14■■■■□ 3.7
SSBP3-204ENST00000371320 DIP2BQ9P265 1576 aa38.11■■■■□ 3.69
SSBP3-204ENST00000371320 FAM69CQ0P6D2 419 aa38.1■■■■□ 3.69
SSBP3-204ENST00000371320 MORC1Q86VD1 984 aa38.09■■■■□ 3.69
SSBP3-204ENST00000371320 PUS7Q96PZ0 661 aaKnown RBP38.08■■■■□ 3.69
SSBP3-204ENST00000371320 EVC2Q86UK5 1308 aa38.08■■■■□ 3.69
SSBP3-204ENST00000371320 ZFYVE9O95405 1425 aa38.08■■■■□ 3.69
SSBP3-204ENST00000371320 POLR3AO14802 1390 aaPredicted RBP38.07■■■■□ 3.69
SSBP3-204ENST00000371320 APAF1O14727 1248 aa38.07■■■■□ 3.69
SSBP3-204ENST00000371320 SLFN5Q08AF3 891 aa38.05■■■■□ 3.68
SSBP3-204ENST00000371320 ARHGEF28Q8N1W1 1705 aaKnown RBP38.04■■■■□ 3.68
SSBP3-204ENST00000371320 CRBNQ96SW2 442 aa38.03■■■■□ 3.68
SSBP3-204ENST00000371320 PREX1Q8TCU6 1659 aa38.02■■■■□ 3.68
SSBP3-204ENST00000371320 NGEFQ8N5V2 710 aa37.99■■■■□ 3.67
SSBP3-204ENST00000371320 TULP4Q9NRJ4 1543 aa37.99■■■■□ 3.67
SSBP3-204ENST00000371320 CGNL1Q0VF96 1302 aa37.99■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms