RNA–Protein interactions for RNA: ENST00000371120.7

ATG4C-203, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-203ENST00000371120 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
ATG4C-203ENST00000371120 SETD1BQ9UPS6 1966 aaKnown RBP17.12■□□□□ 0.33
ATG4C-203ENST00000371120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.11■□□□□ 0.33
ATG4C-203ENST00000371120 GGT6Q6P531 493 aa17.1■□□□□ 0.33
ATG4C-203ENST00000371120 L3MBTL2Q969R5 705 aa17.09■□□□□ 0.33
ATG4C-203ENST00000371120 ARHGEF28Q8N1W1 1705 aaKnown RBP17.09■□□□□ 0.33
ATG4C-203ENST00000371120 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
ATG4C-203ENST00000371120 FOXD1Q16676 465 aa17.06■□□□□ 0.32
ATG4C-203ENST00000371120 CPS1P31327 1500 aa17.06■□□□□ 0.32
ATG4C-203ENST00000371120 MED14O60244 1454 aa17.06■□□□□ 0.32
ATG4C-203ENST00000371120 PTPRMP28827 1452 aa17.06■□□□□ 0.32
ATG4C-203ENST00000371120 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
ATG4C-203ENST00000371120 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
ATG4C-203ENST00000371120 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
ATG4C-203ENST00000371120 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
ATG4C-203ENST00000371120 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
ATG4C-203ENST00000371120 ADGRB2O60241 1585 aa17.02■□□□□ 0.32
ATG4C-203ENST00000371120 TECPR2O15040 1411 aa17.02■□□□□ 0.31
ATG4C-203ENST00000371120 XRN1Q8IZH2 1706 aaKnown RBP17.02■□□□□ 0.31
ATG4C-203ENST00000371120 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
ATG4C-203ENST00000371120 RIMS2Q9UQ26 1411 aa17■□□□□ 0.31
ATG4C-203ENST00000371120 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
ATG4C-203ENST00000371120 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
ATG4C-203ENST00000371120 QRICH2Q9H0J4 1663 aa16.99■□□□□ 0.31
ATG4C-203ENST00000371120 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
ATG4C-203ENST00000371120 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
ATG4C-203ENST00000371120 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
ATG4C-203ENST00000371120 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
ATG4C-203ENST00000371120 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
ATG4C-203ENST00000371120 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
ATG4C-203ENST00000371120 PIK3R4Q99570 1358 aa16.96■□□□□ 0.31
ATG4C-203ENST00000371120 IDI1Q13907 227 aa16.96■□□□□ 0.31
ATG4C-203ENST00000371120 VGFO15240 615 aaPredicted RBP16.95■□□□□ 0.3
ATG4C-203ENST00000371120 HDGFP51858 240 aaKnown RBP16.94■□□□□ 0.3
ATG4C-203ENST00000371120 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
ATG4C-203ENST00000371120 C14orf93Q9H972 538 aaKnown RBP16.93■□□□□ 0.3
ATG4C-203ENST00000371120 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
ATG4C-203ENST00000371120 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
ATG4C-203ENST00000371120 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
ATG4C-203ENST00000371120 MYOM1P52179 1685 aa16.92■□□□□ 0.3
ATG4C-203ENST00000371120 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
ATG4C-203ENST00000371120 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
ATG4C-203ENST00000371120 USP47Q96K76 1375 aa16.91■□□□□ 0.3
ATG4C-203ENST00000371120 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
ATG4C-203ENST00000371120 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
ATG4C-203ENST00000371120 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.29
ATG4C-203ENST00000371120 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
ATG4C-203ENST00000371120 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATG4C-203ENST00000371120 FBXO31Q5XUX0 539 aaPredicted RBP16.87■□□□□ 0.29
ATG4C-203ENST00000371120 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
ATG4C-203ENST00000371120 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
ATG4C-203ENST00000371120 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
ATG4C-203ENST00000371120 ADGRF5Q8IZF2 1346 aa16.84■□□□□ 0.29
ATG4C-203ENST00000371120 LMTK3Q96Q04 1460 aa16.84■□□□□ 0.29
ATG4C-203ENST00000371120 YTHDC2Q9H6S0 1430 aaKnown RBP16.83■□□□□ 0.28
ATG4C-203ENST00000371120 THEMISQ8N1K5 641 aaPredicted RBP16.83■□□□□ 0.28
ATG4C-203ENST00000371120 ITSN1Q15811 1721 aa16.82■□□□□ 0.28
ATG4C-203ENST00000371120 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
ATG4C-203ENST00000371120 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
ATG4C-203ENST00000371120 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
ATG4C-203ENST00000371120 CCDC7Q96M83 1385 aa16.79■□□□□ 0.28
ATG4C-203ENST00000371120 STRCQ7RTU9 1775 aa16.79■□□□□ 0.28
ATG4C-203ENST00000371120 MLECQ14165 292 aa16.79■□□□□ 0.28
ATG4C-203ENST00000371120 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
ATG4C-203ENST00000371120 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
ATG4C-203ENST00000371120 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
ATG4C-203ENST00000371120 ANKRD26Q9UPS8 1709 aa16.78■□□□□ 0.28
ATG4C-203ENST00000371120 TULP4Q9NRJ4 1543 aa16.78■□□□□ 0.28
ATG4C-203ENST00000371120 CARD11Q9BXL7 1154 aa16.77■□□□□ 0.27
ATG4C-203ENST00000371120 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
ATG4C-203ENST00000371120 FMN2Q9NZ56 1722 aa16.76■□□□□ 0.27
ATG4C-203ENST00000371120 TBX22Q9Y458 520 aa16.76■□□□□ 0.27
ATG4C-203ENST00000371120 ZNF326Q5BKZ1 582 aaKnown RBP16.75■□□□□ 0.27
ATG4C-203ENST00000371120 TESK2Q96S53 571 aa16.75■□□□□ 0.27
ATG4C-203ENST00000371120 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
ATG4C-203ENST00000371120 NPHP4O75161 1426 aaPredicted RBP16.74■□□□□ 0.27
ATG4C-203ENST00000371120 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
ATG4C-203ENST00000371120 LRRC7Q96NW7 1537 aa16.74■□□□□ 0.27
ATG4C-203ENST00000371120 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
ATG4C-203ENST00000371120 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
ATG4C-203ENST00000371120 EID1Q9Y6B2 187 aa16.72■□□□□ 0.27
ATG4C-203ENST00000371120 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
ATG4C-203ENST00000371120 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
ATG4C-203ENST00000371120 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
ATG4C-203ENST00000371120 NALCNQ8IZF0 1738 aa16.7■□□□□ 0.26
ATG4C-203ENST00000371120 NBPF1Q3BBV0 1214 aa16.68■□□□□ 0.26
ATG4C-203ENST00000371120 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
ATG4C-203ENST00000371120 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
ATG4C-203ENST00000371120 ATP7BP35670 1465 aa16.68■□□□□ 0.26
ATG4C-203ENST00000371120 CFAP70Q5T0N1 1121 aa16.68■□□□□ 0.26
ATG4C-203ENST00000371120 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
ATG4C-203ENST00000371120 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
ATG4C-203ENST00000371120 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
ATG4C-203ENST00000371120 PTPRUQ92729 1446 aa16.67■□□□□ 0.26
ATG4C-203ENST00000371120 CENPJQ9HC77 1338 aaPredicted RBP16.67■□□□□ 0.26
ATG4C-203ENST00000371120 DCCP43146 1447 aa16.67■□□□□ 0.26
ATG4C-203ENST00000371120 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
ATG4C-203ENST00000371120 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
ATG4C-203ENST00000371120 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
ATG4C-203ENST00000371120 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms