RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
COL21A1-202ENST00000370817 MAPKBP1O60336 1514 aa13.4□□□□□ -0.26
COL21A1-202ENST00000370817 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
COL21A1-202ENST00000370817 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
COL21A1-202ENST00000370817 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
COL21A1-202ENST00000370817 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
COL21A1-202ENST00000370817 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
COL21A1-202ENST00000370817 DPYSL4O14531 572 aa13.38□□□□□ -0.27
COL21A1-202ENST00000370817 ZBED2Q9BTP6 218 aa13.38□□□□□ -0.27
COL21A1-202ENST00000370817 HCSTQ9UBK5 93 aa13.38□□□□□ -0.27
COL21A1-202ENST00000370817 RAPGEF6Q8TEU7 1601 aa13.38□□□□□ -0.27
COL21A1-202ENST00000370817 KDM5BQ9UGL1 1544 aa13.38□□□□□ -0.27
COL21A1-202ENST00000370817 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
COL21A1-202ENST00000370817 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
COL21A1-202ENST00000370817 KCTD12Q96CX2 325 aaKnown RBP13.36□□□□□ -0.27
COL21A1-202ENST00000370817 FHOD3Q2V2M9 1422 aa13.36□□□□□ -0.27
COL21A1-202ENST00000370817 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
COL21A1-202ENST00000370817 PHF14O94880 888 aa13.34□□□□□ -0.27
COL21A1-202ENST00000370817 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
COL21A1-202ENST00000370817 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.27
COL21A1-202ENST00000370817 DIP2BQ9P265 1576 aa13.33□□□□□ -0.28
COL21A1-202ENST00000370817 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.28
COL21A1-202ENST00000370817 UBTFP17480 764 aaKnown RBP13.33□□□□□ -0.28
COL21A1-202ENST00000370817 TYW1BQ6NUM6 668 aa13.32□□□□□ -0.28
COL21A1-202ENST00000370817 FBXW7Q969H0 707 aa13.3□□□□□ -0.28
COL21A1-202ENST00000370817 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
COL21A1-202ENST00000370817 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
COL21A1-202ENST00000370817 COL9A1P20849 921 aa13.29□□□□□ -0.28
COL21A1-202ENST00000370817 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
COL21A1-202ENST00000370817 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
COL21A1-202ENST00000370817 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
COL21A1-202ENST00000370817 GLI2P10070 1586 aa13.27□□□□□ -0.29
COL21A1-202ENST00000370817 ATP10BO94823 1461 aa13.26□□□□□ -0.29
COL21A1-202ENST00000370817 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
COL21A1-202ENST00000370817 CLIP1P30622 1438 aa13.26□□□□□ -0.29
COL21A1-202ENST00000370817 PROX2Q3B8N5 592 aa13.26□□□□□ -0.29
COL21A1-202ENST00000370817 ASXL2Q76L83 1435 aa13.26□□□□□ -0.29
COL21A1-202ENST00000370817 HECW1Q76N89 1606 aa13.26□□□□□ -0.29
COL21A1-202ENST00000370817 EPAS1Q99814 870 aa13.26□□□□□ -0.29
COL21A1-202ENST00000370817 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
COL21A1-202ENST00000370817 FMN1Q68DA7 1419 aa13.25□□□□□ -0.29
COL21A1-202ENST00000370817 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
COL21A1-202ENST00000370817 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
COL21A1-202ENST00000370817 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
COL21A1-202ENST00000370817 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
COL21A1-202ENST00000370817 DDX12PQ92771 950 aa13.24□□□□□ -0.29
COL21A1-202ENST00000370817 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
COL21A1-202ENST00000370817 PDIA6Q15084 440 aa13.23□□□□□ -0.29
COL21A1-202ENST00000370817 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
COL21A1-202ENST00000370817 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
COL21A1-202ENST00000370817 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
COL21A1-202ENST00000370817 PTPN5P54829 565 aa13.21□□□□□ -0.29
COL21A1-202ENST00000370817 E2F4Q16254 413 aa13.21□□□□□ -0.29
COL21A1-202ENST00000370817 C6orf132Q5T0Z8 1188 aa13.21□□□□□ -0.29
COL21A1-202ENST00000370817 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.3
COL21A1-202ENST00000370817 TSPOAP1O95153 1857 aa13.21□□□□□ -0.3
COL21A1-202ENST00000370817 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
COL21A1-202ENST00000370817 GOLGA8CPA6NN73 597 aa13.2□□□□□ -0.3
COL21A1-202ENST00000370817 THSD4Q6ZMP0 1018 aa13.2□□□□□ -0.3
COL21A1-202ENST00000370817 WNT2BQ93097 391 aa13.2□□□□□ -0.3
COL21A1-202ENST00000370817 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
COL21A1-202ENST00000370817 RABGEF1Q9UJ41 708 aa13.2□□□□□ -0.3
COL21A1-202ENST00000370817 CASKIN1Q8WXD9 1431 aa13.2□□□□□ -0.3
COL21A1-202ENST00000370817 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
COL21A1-202ENST00000370817 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
COL21A1-202ENST00000370817 ABCA9Q8IUA7 1624 aa13.18□□□□□ -0.3
COL21A1-202ENST00000370817 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
COL21A1-202ENST00000370817 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
COL21A1-202ENST00000370817 NBR1Q14596 966 aa13.16□□□□□ -0.3
COL21A1-202ENST00000370817 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
COL21A1-202ENST00000370817 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
COL21A1-202ENST00000370817 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
COL21A1-202ENST00000370817 CCDC18Q5T9S5 1454 aa13.14□□□□□ -0.31
COL21A1-202ENST00000370817 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
COL21A1-202ENST00000370817 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
COL21A1-202ENST00000370817 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
COL21A1-202ENST00000370817 KIF14Q15058 1648 aa13.11□□□□□ -0.31
COL21A1-202ENST00000370817 FAM69CQ0P6D2 419 aa13.11□□□□□ -0.31
COL21A1-202ENST00000370817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.1□□□□□ -0.31
COL21A1-202ENST00000370817 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
COL21A1-202ENST00000370817 MAP3K7O43318 606 aa13.1□□□□□ -0.31
COL21A1-202ENST00000370817 ONECUT3O60422 494 aaPredicted RBP13.1□□□□□ -0.31
COL21A1-202ENST00000370817 ARID3CA6NKF2 412 aa13.09□□□□□ -0.31
COL21A1-202ENST00000370817 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
COL21A1-202ENST00000370817 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
COL21A1-202ENST00000370817 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
COL21A1-202ENST00000370817 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
COL21A1-202ENST00000370817 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.32
COL21A1-202ENST00000370817 ANKK1Q8NFD2 765 aa13.07□□□□□ -0.32
COL21A1-202ENST00000370817 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
COL21A1-202ENST00000370817 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
COL21A1-202ENST00000370817 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
COL21A1-202ENST00000370817 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
COL21A1-202ENST00000370817 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
COL21A1-202ENST00000370817 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
COL21A1-202ENST00000370817 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
COL21A1-202ENST00000370817 BCAMP50895 628 aa13.05□□□□□ -0.32
COL21A1-202ENST00000370817 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
COL21A1-202ENST00000370817 KDM6BO15054 1643 aa13.04□□□□□ -0.32
COL21A1-202ENST00000370817 TSKSQ9UJT2 592 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms