RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
TMEM56-201ENST00000370203 TPM3P06753 285 aa15.44■□□□□ 0.06
TMEM56-201ENST00000370203 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
TMEM56-201ENST00000370203 FKBP5Q13451 457 aaPredicted RBP15.43■□□□□ 0.06
TMEM56-201ENST00000370203 NEUROD6Q96NK8 337 aa15.43■□□□□ 0.06
TMEM56-201ENST00000370203 IFIT2P09913 472 aaKnown RBP15.43■□□□□ 0.06
TMEM56-201ENST00000370203 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
TMEM56-201ENST00000370203 TMEM132EQ6IEE7 984 aa15.43■□□□□ 0.06
TMEM56-201ENST00000370203 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
TMEM56-201ENST00000370203 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
TMEM56-201ENST00000370203 SYNE3Q6ZMZ3 975 aa15.43■□□□□ 0.06
TMEM56-201ENST00000370203 NUTM2BA6NNL0 878 aaPredicted RBP15.42■□□□□ 0.06
TMEM56-201ENST00000370203 NUTM2EB1AL46 878 aaPredicted RBP15.42■□□□□ 0.06
TMEM56-201ENST00000370203 NUTM2AQ8IVF1 878 aaPredicted RBP15.42■□□□□ 0.06
TMEM56-201ENST00000370203 KRI1Q8N9T8 703 aaKnown RBP15.42■□□□□ 0.06
TMEM56-201ENST00000370203 NLRP2Q9NX02 1062 aa15.42■□□□□ 0.06
TMEM56-201ENST00000370203 EVC2Q86UK5 1308 aa15.42■□□□□ 0.06
TMEM56-201ENST00000370203 IPO9Q96P70 1041 aaKnown RBP15.42■□□□□ 0.06
TMEM56-201ENST00000370203 TSHZ2Q9NRE2 1034 aa15.42■□□□□ 0.06
TMEM56-201ENST00000370203 CGNL1Q0VF96 1302 aa15.42■□□□□ 0.06
TMEM56-201ENST00000370203 CCDC34Q96HJ3 373 aa15.41■□□□□ 0.06
TMEM56-201ENST00000370203 GGNBP2Q9H3C7 697 aa15.41■□□□□ 0.06
TMEM56-201ENST00000370203 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
TMEM56-201ENST00000370203 GOLGA6L1Q8N7Z2 621 aa15.4■□□□□ 0.06
TMEM56-201ENST00000370203 CSPP1Q1MSJ5 1256 aa15.4■□□□□ 0.06
TMEM56-201ENST00000370203 AMOTL1Q8IY63 956 aa15.4■□□□□ 0.06
TMEM56-201ENST00000370203 MYBBP1AQ9BQG0 1328 aaKnown RBP15.4■□□□□ 0.06
TMEM56-201ENST00000370203 ZKSCAN2Q63HK3 967 aa15.4■□□□□ 0.06
TMEM56-201ENST00000370203 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
TMEM56-201ENST00000370203 TSPYL4Q9UJ04 414 aa15.4■□□□□ 0.06
TMEM56-201ENST00000370203 DIAPH1O60610 1272 aaKnown RBP15.39■□□□□ 0.05
TMEM56-201ENST00000370203 CHMP4CQ96CF2 233 aa15.39■□□□□ 0.05
TMEM56-201ENST00000370203 DDX49Q9Y6V7 483 aaKnown RBP15.39■□□□□ 0.05
TMEM56-201ENST00000370203 KIF15Q9NS87 1388 aa15.39■□□□□ 0.05
TMEM56-201ENST00000370203 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
TMEM56-201ENST00000370203 ATF3P18847 181 aa15.38■□□□□ 0.05
TMEM56-201ENST00000370203 RIC3Q7Z5B4 369 aa15.38■□□□□ 0.05
TMEM56-201ENST00000370203 WIZO95785 1651 aa15.38■□□□□ 0.05
TMEM56-201ENST00000370203 TNNT3P45378 269 aaPredicted RBP15.37■□□□□ 0.05
TMEM56-201ENST00000370203 FAM161AQ3B820 660 aa15.37■□□□□ 0.05
TMEM56-201ENST00000370203 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
TMEM56-201ENST00000370203 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
TMEM56-201ENST00000370203 TRIM29Q14134 588 aa15.37■□□□□ 0.05
TMEM56-201ENST00000370203 BECN2A8MW95 431 aa15.37■□□□□ 0.05
TMEM56-201ENST00000370203 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
TMEM56-201ENST00000370203 ZNF644Q9H582 1327 aaPredicted RBP15.37■□□□□ 0.05
TMEM56-201ENST00000370203 GOLGA6L19H0YKK7 550 aa15.37■□□□□ 0.05
TMEM56-201ENST00000370203 WASHC4Q2M389 1173 aa15.37■□□□□ 0.05
TMEM56-201ENST00000370203 PTMSP20962 102 aa15.37■□□□□ 0.05
TMEM56-201ENST00000370203 CCDC18Q5T9S5 1454 aa15.36■□□□□ 0.05
TMEM56-201ENST00000370203 VPS37CA5D8V6 355 aaPredicted RBP15.36■□□□□ 0.05
TMEM56-201ENST00000370203 CPLX1O14810 134 aa15.36■□□□□ 0.05
TMEM56-201ENST00000370203 CHMP4AQ9BY43 222 aa15.36■□□□□ 0.05
TMEM56-201ENST00000370203 G3BP1Q13283 466 aaKnown RBP eCLIP15.35■□□□□ 0.05
TMEM56-201ENST00000370203 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.35■□□□□ 0.05
TMEM56-201ENST00000370203 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
TMEM56-201ENST00000370203 TSR1Q2NL82 804 aaKnown RBP15.35■□□□□ 0.05
TMEM56-201ENST00000370203 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
TMEM56-201ENST00000370203 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
TMEM56-201ENST00000370203 LNPKQ9C0E8 428 aa15.34■□□□□ 0.05
TMEM56-201ENST00000370203 PDE4AP27815 886 aa15.34■□□□□ 0.05
TMEM56-201ENST00000370203 ESCO1Q5FWF5 840 aa15.34■□□□□ 0.05
TMEM56-201ENST00000370203 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
TMEM56-201ENST00000370203 BICD2Q8TD16 824 aa15.33■□□□□ 0.05
TMEM56-201ENST00000370203 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
TMEM56-201ENST00000370203 CCDC43Q96MW1 224 aaKnown RBP15.33■□□□□ 0.04
TMEM56-201ENST00000370203 PANK1Q8TE04 598 aa15.33■□□□□ 0.04
TMEM56-201ENST00000370203 USP47Q96K76 1375 aa15.32■□□□□ 0.04
TMEM56-201ENST00000370203 TPM2P07951 284 aa15.32■□□□□ 0.04
TMEM56-201ENST00000370203 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
TMEM56-201ENST00000370203 DNAJC2Q99543 621 aaKnown RBP15.32■□□□□ 0.04
TMEM56-201ENST00000370203 KIF3AQ9Y496 699 aa15.31■□□□□ 0.04
TMEM56-201ENST00000370203 E9PSI1 815 aa15.31■□□□□ 0.04
TMEM56-201ENST00000370203 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
TMEM56-201ENST00000370203 PHF14O94880 888 aa15.31■□□□□ 0.04
TMEM56-201ENST00000370203 PTPRGP23470 1445 aa15.31■□□□□ 0.04
TMEM56-201ENST00000370203 NAP1L1P55209 391 aaKnown RBP15.31■□□□□ 0.04
TMEM56-201ENST00000370203 ERICH2A1L162 156 aa15.3■□□□□ 0.04
TMEM56-201ENST00000370203 ATP2B1P20020 1258 aa15.3■□□□□ 0.04
TMEM56-201ENST00000370203 TRDNQ13061 729 aa15.3■□□□□ 0.04
TMEM56-201ENST00000370203 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
TMEM56-201ENST00000370203 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
TMEM56-201ENST00000370203 MAP4K4O95819 1239 aaPredicted RBP15.3■□□□□ 0.04
TMEM56-201ENST00000370203 NLRP6P59044 892 aa15.3■□□□□ 0.04
TMEM56-201ENST00000370203 TTLL5Q6EMB2 1281 aa15.29■□□□□ 0.04
TMEM56-201ENST00000370203 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
TMEM56-201ENST00000370203 DDX58O95786 925 aaKnown RBP15.29■□□□□ 0.04
TMEM56-201ENST00000370203 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
TMEM56-201ENST00000370203 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
TMEM56-201ENST00000370203 RRP12Q5JTH9 1297 aaKnown RBP15.29■□□□□ 0.04
TMEM56-201ENST00000370203 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
TMEM56-201ENST00000370203 SKIDA1Q1XH10 827 aa15.28■□□□□ 0.04
TMEM56-201ENST00000370203 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
TMEM56-201ENST00000370203 ABTB2Q8N961 1025 aa15.28■□□□□ 0.04
TMEM56-201ENST00000370203 DDX54Q8TDD1 881 aaKnown RBP15.28■□□□□ 0.04
TMEM56-201ENST00000370203 ZKSCAN1P17029 563 aaPredicted RBP15.28■□□□□ 0.04
TMEM56-201ENST00000370203 ATP2B2Q01814 1243 aa15.28■□□□□ 0.04
TMEM56-201ENST00000370203 RUFY2Q8WXA3 655 aa15.26■□□□□ 0.03
TMEM56-201ENST00000370203 PRKRIP1Q9H875 184 aaPredicted RBP15.26■□□□□ 0.03
TMEM56-201ENST00000370203 ZFYVE27Q5T4F4 411 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms