RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
PRPF38B-202ENST00000370022 TXNDC2Q86VQ3 553 aa22.6■■□□□ 1.21
PRPF38B-202ENST00000370022 POLR1AO95602 1720 aaPredicted RBP22.58■■□□□ 1.21
PRPF38B-202ENST00000370022 MED14O60244 1454 aa22.58■■□□□ 1.21
PRPF38B-202ENST00000370022 DMRT2Q9Y5R5 561 aa22.58■■□□□ 1.2
PRPF38B-202ENST00000370022 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
PRPF38B-202ENST00000370022 STRCQ7RTU9 1775 aa22.57■■□□□ 1.2
PRPF38B-202ENST00000370022 LTKP29376 864 aa22.57■■□□□ 1.2
PRPF38B-202ENST00000370022 NEXMIFQ5QGS0 1516 aa22.57■■□□□ 1.2
PRPF38B-202ENST00000370022 RGL3Q3MIN7 710 aa22.56■■□□□ 1.2
PRPF38B-202ENST00000370022 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
PRPF38B-202ENST00000370022 CCER1Q8TC90 406 aaPredicted RBP22.55■■□□□ 1.2
PRPF38B-202ENST00000370022 VGFO15240 615 aaPredicted RBP22.54■■□□□ 1.2
PRPF38B-202ENST00000370022 SIN3AQ96ST3 1273 aa22.54■■□□□ 1.2
PRPF38B-202ENST00000370022 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
PRPF38B-202ENST00000370022 STAC3Q96MF2 364 aa22.52■■□□□ 1.2
PRPF38B-202ENST00000370022 PLEKHG1Q9ULL1 1385 aa22.52■■□□□ 1.2
PRPF38B-202ENST00000370022 NEUROD1Q13562 356 aa22.5■■□□□ 1.19
PRPF38B-202ENST00000370022 ILDR1Q86SU0 546 aaPredicted RBP22.5■■□□□ 1.19
PRPF38B-202ENST00000370022 PPLO60437 1756 aa22.5■■□□□ 1.19
PRPF38B-202ENST00000370022 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
PRPF38B-202ENST00000370022 IQGAP1P46940 1657 aa22.49■■□□□ 1.19
PRPF38B-202ENST00000370022 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
PRPF38B-202ENST00000370022 MYOM2P54296 1465 aa22.48■■□□□ 1.19
PRPF38B-202ENST00000370022 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
PRPF38B-202ENST00000370022 BCANQ96GW7 911 aa22.46■■□□□ 1.19
PRPF38B-202ENST00000370022 SETBP1Q9Y6X0 1596 aa22.45■■□□□ 1.18
PRPF38B-202ENST00000370022 TONSLQ96HA7 1378 aa22.43■■□□□ 1.18
PRPF38B-202ENST00000370022 NRXN1Q9ULB1 1477 aa22.43■■□□□ 1.18
PRPF38B-202ENST00000370022 ADGRF5Q8IZF2 1346 aa22.42■■□□□ 1.18
PRPF38B-202ENST00000370022 DIP2AQ14689 1571 aa22.42■■□□□ 1.18
PRPF38B-202ENST00000370022 L3MBTL2Q969R5 705 aa22.42■■□□□ 1.18
PRPF38B-202ENST00000370022 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
PRPF38B-202ENST00000370022 TBX22Q9Y458 520 aa22.41■■□□□ 1.18
PRPF38B-202ENST00000370022 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
PRPF38B-202ENST00000370022 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
PRPF38B-202ENST00000370022 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.18
PRPF38B-202ENST00000370022 SLC26A8Q96RN1 970 aa22.38■■□□□ 1.17
PRPF38B-202ENST00000370022 NRXN3Q9Y4C0 1643 aa22.38■■□□□ 1.17
PRPF38B-202ENST00000370022 PIK3R4Q99570 1358 aa22.36■■□□□ 1.17
PRPF38B-202ENST00000370022 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
PRPF38B-202ENST00000370022 ALKQ9UM73 1620 aa22.34■■□□□ 1.17
PRPF38B-202ENST00000370022 LAMC1P11047 1609 aa22.33■■□□□ 1.17
PRPF38B-202ENST00000370022 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.16
PRPF38B-202ENST00000370022 PRAG1Q86YV5 1406 aa22.32■■□□□ 1.16
PRPF38B-202ENST00000370022 SETD1AO15047 1707 aaKnown RBP22.29■■□□□ 1.16
PRPF38B-202ENST00000370022 KCNA6P17658 529 aa22.29■■□□□ 1.16
PRPF38B-202ENST00000370022 METP08581 1390 aa22.29■■□□□ 1.16
PRPF38B-202ENST00000370022 ZNF335Q9H4Z2 1342 aaPredicted RBP22.29■■□□□ 1.16
PRPF38B-202ENST00000370022 CFAP70Q5T0N1 1121 aa22.28■■□□□ 1.16
PRPF38B-202ENST00000370022 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
PRPF38B-202ENST00000370022 KIAA1210Q9ULL0 1709 aa22.26■■□□□ 1.15
PRPF38B-202ENST00000370022 CPS1P31327 1500 aa22.25■■□□□ 1.15
PRPF38B-202ENST00000370022 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
PRPF38B-202ENST00000370022 FBXO41Q8TF61 875 aa22.24■■□□□ 1.15
PRPF38B-202ENST00000370022 NKTRP30414 1462 aaKnown RBP22.23■■□□□ 1.15
PRPF38B-202ENST00000370022 LTBP4Q8N2S1 1624 aa22.23■■□□□ 1.15
PRPF38B-202ENST00000370022 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
PRPF38B-202ENST00000370022 PTPRUQ92729 1446 aa22.22■■□□□ 1.15
PRPF38B-202ENST00000370022 ASXL1Q8IXJ9 1541 aa22.21■■□□□ 1.15
PRPF38B-202ENST00000370022 ADGRB1O14514 1584 aa22.21■■□□□ 1.15
PRPF38B-202ENST00000370022 LRPPRCP42704 1394 aaKnown RBP22.2■■□□□ 1.15
PRPF38B-202ENST00000370022 XRN1Q8IZH2 1706 aaKnown RBP22.2■■□□□ 1.14
PRPF38B-202ENST00000370022 TMEM132EQ6IEE7 984 aa22.2■■□□□ 1.14
PRPF38B-202ENST00000370022 YTHDC2Q9H6S0 1430 aaKnown RBP22.19■■□□□ 1.14
PRPF38B-202ENST00000370022 STRCP1A6NGW2 1772 aa22.19■■□□□ 1.14
PRPF38B-202ENST00000370022 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
PRPF38B-202ENST00000370022 NBPF8Q3BBV2 869 aa22.19■■□□□ 1.14
PRPF38B-202ENST00000370022 TRPM1Q7Z4N2 1603 aa22.19■■□□□ 1.14
PRPF38B-202ENST00000370022 TECPR2O15040 1411 aa22.18■■□□□ 1.14
PRPF38B-202ENST00000370022 PTCH1Q13635 1447 aa22.18■■□□□ 1.14
PRPF38B-202ENST00000370022 RALGAPBQ86X10 1494 aa22.15■■□□□ 1.14
PRPF38B-202ENST00000370022 LRRC7Q96NW7 1537 aa22.15■■□□□ 1.14
PRPF38B-202ENST00000370022 ROCK2O75116 1388 aaKnown RBP22.15■■□□□ 1.14
PRPF38B-202ENST00000370022 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
PRPF38B-202ENST00000370022 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.14
PRPF38B-202ENST00000370022 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
PRPF38B-202ENST00000370022 PROSER2Q86WR7 435 aaPredicted RBP22.14■■□□□ 1.13
PRPF38B-202ENST00000370022 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
PRPF38B-202ENST00000370022 STK26Q9P289 416 aa22.14■■□□□ 1.13
PRPF38B-202ENST00000370022 GPRASP1Q5JY77 1395 aa22.14■■□□□ 1.13
PRPF38B-202ENST00000370022 DLC1Q96QB1 1528 aa22.13■■□□□ 1.13
PRPF38B-202ENST00000370022 CERKQ8TCT0 537 aa22.12■■□□□ 1.13
PRPF38B-202ENST00000370022 IQSEC2Q5JU85 1478 aa22.12■■□□□ 1.13
PRPF38B-202ENST00000370022 TMEM94Q12767 1356 aa22.11■■□□□ 1.13
PRPF38B-202ENST00000370022 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
PRPF38B-202ENST00000370022 FAM135BQ49AJ0 1406 aa22.11■■□□□ 1.13
PRPF38B-202ENST00000370022 TRAK1Q9UPV9 953 aa22.08■■□□□ 1.13
PRPF38B-202ENST00000370022 CARD11Q9BXL7 1154 aa22.08■■□□□ 1.12
PRPF38B-202ENST00000370022 PRAM1Q96QH2 718 aa22.04■■□□□ 1.12
PRPF38B-202ENST00000370022 EIF3AQ14152 1382 aaKnown RBP22.04■■□□□ 1.12
PRPF38B-202ENST00000370022 WAPLQ7Z5K2 1190 aa22.04■■□□□ 1.12
PRPF38B-202ENST00000370022 C14orf37Q86TY3 774 aa22.04■■□□□ 1.12
PRPF38B-202ENST00000370022 POGKQ9P215 609 aa22.04■■□□□ 1.12
PRPF38B-202ENST00000370022 MSH6P52701 1360 aa22.03■■□□□ 1.12
PRPF38B-202ENST00000370022 XIRP1Q702N8 1843 aaKnown RBP22.03■■□□□ 1.12
PRPF38B-202ENST00000370022 RBM33Q96EV2 1170 aaKnown RBP22.03■■□□□ 1.12
PRPF38B-202ENST00000370022 ARHGEF28Q8N1W1 1705 aaKnown RBP22.03■■□□□ 1.12
PRPF38B-202ENST00000370022 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.12
PRPF38B-202ENST00000370022 ADGRL3Q9HAR2 1447 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms