RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
HCFC1-202ENST00000369984 CPLX2Q6PUV4 134 aaKnown RBP15.16■□□□□ 0.02
HCFC1-202ENST00000369984 FBXW7Q969H0 707 aa15.16■□□□□ 0.02
HCFC1-202ENST00000369984 TRIM34Q9BYJ4 488 aa15.16■□□□□ 0.02
HCFC1-202ENST00000369984 NAP1L1P55209 391 aaKnown RBP15.16■□□□□ 0.02
HCFC1-202ENST00000369984 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
HCFC1-202ENST00000369984 ZKSCAN1P17029 563 aaPredicted RBP15.15■□□□□ 0.02
HCFC1-202ENST00000369984 CRBNQ96SW2 442 aa15.15■□□□□ 0.02
HCFC1-202ENST00000369984 RRP1P56182 461 aaKnown RBP15.15■□□□□ 0.02
HCFC1-202ENST00000369984 MEX3CQ5U5Q3 659 aaKnown RBP15.15■□□□□ 0.02
HCFC1-202ENST00000369984 STK11IPQ8N1F8 1099 aa15.15■□□□□ 0.02
HCFC1-202ENST00000369984 SOGA1O94964 1423 aa15.15■□□□□ 0.02
HCFC1-202ENST00000369984 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
HCFC1-202ENST00000369984 CCDC191Q8NCU4 936 aa15.14■□□□□ 0.01
HCFC1-202ENST00000369984 NOL10Q9BSC4 688 aaKnown RBP15.14■□□□□ 0.01
HCFC1-202ENST00000369984 IFT57Q9NWB7 429 aa15.14■□□□□ 0.01
HCFC1-202ENST00000369984 ZKSCAN2Q63HK3 967 aa15.14■□□□□ 0.01
HCFC1-202ENST00000369984 FAM43AQ8N2R8 423 aa15.14■□□□□ 0.01
HCFC1-202ENST00000369984 CPLX1O14810 134 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
HCFC1-202ENST00000369984 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
HCFC1-202ENST00000369984 ACBD3Q9H3P7 528 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 C1orf141Q5JVX7 400 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 E9PSI1 815 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 CARMIL2Q6F5E8 1435 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 CGNL1Q0VF96 1302 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 CDR1P51861 262 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 HSP90AB3PQ58FF7 597 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
HCFC1-202ENST00000369984 H0YHG0 523 aa15.13■□□□□ 0.01
HCFC1-202ENST00000369984 HSP90B2PQ58FF3 399 aa15.12■□□□□ 0.01
HCFC1-202ENST00000369984 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-202ENST00000369984 EID1Q9Y6B2 187 aa15.11■□□□□ 0.01
HCFC1-202ENST00000369984 CTDP1Q9Y5B0 961 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-202ENST00000369984 MNS1Q8NEH6 495 aa15.11■□□□□ 0.01
HCFC1-202ENST00000369984 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-202ENST00000369984 ODF2Q5BJF6 829 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 RNF20Q5VTR2 975 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 NEXNQ0ZGT2 675 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 TRDNQ13061 729 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 ZBED9Q6R2W3 1325 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 NFXL1Q6ZNB6 911 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 CT47A1Q5JQC4 288 aaPredicted RBP15.1■□□□□ 0.01
HCFC1-202ENST00000369984 EPS15P42566 896 aa15.1■□□□□ 0.01
HCFC1-202ENST00000369984 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 VPS37DQ86XT2 251 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 EXOC6Q8TAG9 804 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 ERICH2A1L162 156 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 IFIT2P09913 472 aaKnown RBP15.09■□□□□ 0.01
HCFC1-202ENST00000369984 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 L3MBTL2Q969R5 705 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 PANK3Q9H999 370 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
HCFC1-202ENST00000369984 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.09■□□□□ 0.016e-7■■■■■ 113.5
HCFC1-202ENST00000369984 FOSBP53539 338 aa15.08■□□□□ 0.01
HCFC1-202ENST00000369984 NAT10Q9H0A0 1025 aaKnown RBP15.08■□□□□ 0.01
HCFC1-202ENST00000369984 VPS37CA5D8V6 355 aaPredicted RBP15.08■□□□□ 0
HCFC1-202ENST00000369984 CCDC18Q5T9S5 1454 aa15.08■□□□□ 0
HCFC1-202ENST00000369984 DHX16O60231 1041 aaKnown RBP15.08■□□□□ 0
HCFC1-202ENST00000369984 CWC15Q9P013 229 aaKnown RBP15.08■□□□□ 0
HCFC1-202ENST00000369984 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0
HCFC1-202ENST00000369984 CHMP5Q9NZZ3 219 aa15.08■□□□□ 0
HCFC1-202ENST00000369984 SMC3Q9UQE7 1217 aa15.08■□□□□ 0
HCFC1-202ENST00000369984 DDX19BQ9UMR2 479 aa15.08■□□□□ 0
HCFC1-202ENST00000369984 CAGE1Q8TC20 777 aa15.07■□□□□ 0
HCFC1-202ENST00000369984 FANCIQ9NVI1 1328 aa15.06■□□□□ 0
HCFC1-202ENST00000369984 NUCB2P80303 420 aa15.06■□□□□ 0
HCFC1-202ENST00000369984 TRAK1Q9UPV9 953 aa15.06■□□□□ 0
HCFC1-202ENST00000369984 NASPP49321 788 aaPredicted RBP15.06■□□□□ 0
HCFC1-202ENST00000369984 INTS3Q68E01 1043 aaKnown RBP15.06■□□□□ 0
HCFC1-202ENST00000369984 DCTN1Q14203 1278 aa15.06■□□□□ 0
HCFC1-202ENST00000369984 OLFM4Q6UX06 510 aa15.05■□□□□ 0
HCFC1-202ENST00000369984 KIF3BO15066 747 aa15.05■□□□□ 0
HCFC1-202ENST00000369984 HSP90AB2PQ58FF8 381 aa15.05■□□□□ -0
HCFC1-202ENST00000369984 UACAQ9BZF9 1416 aa15.05■□□□□ -0
HCFC1-202ENST00000369984 CCDC144AA2RUR9 1427 aa15.05■□□□□ -0
HCFC1-202ENST00000369984 EIF2S2P20042 333 aaKnown RBP15.05■□□□□ -0
HCFC1-202ENST00000369984 COG3Q96JB2 828 aa15.05■□□□□ -0
HCFC1-202ENST00000369984 CCDC39Q9UFE4 941 aa15.05■□□□□ -0
HCFC1-202ENST00000369984 PDILTQ8N807 584 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 WASHC2CQ9Y4E1 1318 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 NECTIN2Q92692 538 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 EVA1CP58658 441 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
HCFC1-202ENST00000369984 CCDC73Q6ZRK6 1079 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 SAFBQ15424 915 aaKnown RBP eCLIP15.04■□□□□ -0
HCFC1-202ENST00000369984 TEFQ10587 303 aa15.04■□□□□ -0
HCFC1-202ENST00000369984 MTERF4Q7Z6M4 381 aaKnown RBP15.04■□□□□ -0
HCFC1-202ENST00000369984 HNRNPMP52272 730 aaKnown RBP eCLIP15.03■□□□□ -02e-7■□□□□ 8.3
HCFC1-202ENST00000369984 ZRSR2Q15696 482 aaKnown RBP15.03■□□□□ -0
HCFC1-202ENST00000369984 MYO6Q9UM54 1294 aa15.03■□□□□ -0
HCFC1-202ENST00000369984 R3HCC1Q9Y3T6 440 aaKnown RBP15.02■□□□□ -0
HCFC1-202ENST00000369984 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
HCFC1-202ENST00000369984 ST20-MTHFSA0A0A6YYL1 179 aa15.02□□□□□ -0.01
HCFC1-202ENST00000369984 TTLL5Q6EMB2 1281 aa15.02□□□□□ -0.01
HCFC1-202ENST00000369984 ZFYVE27Q5T4F4 411 aa15.02□□□□□ -0.01
HCFC1-202ENST00000369984 EFCAB2Q5VUJ9 269 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms