RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 TRIM29Q14134 588 aa13.86□□□□□ -0.19
PDCD11-201ENST00000369797 PCMTD1Q96MG8 357 aaPredicted RBP13.86□□□□□ -0.19
PDCD11-201ENST00000369797 TPM2P07951 284 aa13.86□□□□□ -0.19
PDCD11-201ENST00000369797 CPLX2Q6PUV4 134 aaKnown RBP13.86□□□□□ -0.19
PDCD11-201ENST00000369797 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
PDCD11-201ENST00000369797 BECN2A8MW95 431 aa13.85□□□□□ -0.19
PDCD11-201ENST00000369797 GOLGA6L19H0YKK7 550 aa13.85□□□□□ -0.19
PDCD11-201ENST00000369797 COG6Q9Y2V7 657 aa13.85□□□□□ -0.19
PDCD11-201ENST00000369797 NUTM2GQ5VZR2 741 aa13.85□□□□□ -0.19
PDCD11-201ENST00000369797 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
PDCD11-201ENST00000369797 PHLDB1Q86UU1 1377 aa13.84□□□□□ -0.19
PDCD11-201ENST00000369797 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
PDCD11-201ENST00000369797 CPLX1O14810 134 aa13.84□□□□□ -0.19
PDCD11-201ENST00000369797 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
PDCD11-201ENST00000369797 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
PDCD11-201ENST00000369797 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
PDCD11-201ENST00000369797 DDX58O95786 925 aaKnown RBP13.84□□□□□ -0.19
PDCD11-201ENST00000369797 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
PDCD11-201ENST00000369797 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
PDCD11-201ENST00000369797 ATF3P18847 181 aa13.83□□□□□ -0.2
PDCD11-201ENST00000369797 FYB1O15117 783 aa13.83□□□□□ -0.2
PDCD11-201ENST00000369797 SLC4A3P48751 1232 aa13.83□□□□□ -0.2
PDCD11-201ENST00000369797 UACAQ9BZF9 1416 aa13.83□□□□□ -0.2
PDCD11-201ENST00000369797 APAF1O14727 1248 aa13.83□□□□□ -0.2
PDCD11-201ENST00000369797 TPM1P09493 284 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.25e-7■■■■□ 24
PDCD11-201ENST00000369797 RUFY2Q8WXA3 655 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 RIPK4P57078 832 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 AIMP1Q12904 312 aaKnown RBP13.82□□□□□ -0.2
PDCD11-201ENST00000369797 CCDC43Q96MW1 224 aaKnown RBP13.82□□□□□ -0.2
PDCD11-201ENST00000369797 DDX49Q9Y6V7 483 aaKnown RBP13.82□□□□□ -0.2
PDCD11-201ENST00000369797 FOSBP53539 338 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 E9PSI1 815 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
PDCD11-201ENST00000369797 TRDNQ13061 729 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 SMARCA2P51531 1590 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 RAPGEF4Q8WZA2 1011 aa13.82□□□□□ -0.2
PDCD11-201ENST00000369797 NLRP2Q9NX02 1062 aa13.81□□□□□ -0.2
PDCD11-201ENST00000369797 FAM69CQ0P6D2 419 aa13.81□□□□□ -0.2
PDCD11-201ENST00000369797 ATP6V1DQ9Y5K8 247 aa13.81□□□□□ -0.2
PDCD11-201ENST00000369797 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
PDCD11-201ENST00000369797 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
PDCD11-201ENST00000369797 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
PDCD11-201ENST00000369797 PTPRGP23470 1445 aa13.8□□□□□ -0.2
PDCD11-201ENST00000369797 CRBNQ96SW2 442 aa13.8□□□□□ -0.2
PDCD11-201ENST00000369797 RAPGEF2Q9Y4G8 1499 aa13.79□□□□□ -0.2
PDCD11-201ENST00000369797 HMOX1P09601 288 aa13.79□□□□□ -0.2
PDCD11-201ENST00000369797 NEUROD6Q96NK8 337 aa13.79□□□□□ -0.2
PDCD11-201ENST00000369797 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
PDCD11-201ENST00000369797 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
PDCD11-201ENST00000369797 ERICH2A1L162 156 aa13.79□□□□□ -0.2
PDCD11-201ENST00000369797 CCDC47Q96A33 483 aaKnown RBP13.79□□□□□ -0.2
PDCD11-201ENST00000369797 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
PDCD11-201ENST00000369797 CENPQQ7L2Z9 268 aaPredicted RBP13.78□□□□□ -0.2
PDCD11-201ENST00000369797 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
PDCD11-201ENST00000369797 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
PDCD11-201ENST00000369797 DDX11L8A8MPP1 907 aa13.78□□□□□ -0.2
PDCD11-201ENST00000369797 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
PDCD11-201ENST00000369797 ZNF592Q92610 1267 aa13.77□□□□□ -0.21
PDCD11-201ENST00000369797 PATL2C9JE40 543 aaKnown RBP13.76□□□□□ -0.21
PDCD11-201ENST00000369797 BICD2Q8TD16 824 aa13.76□□□□□ -0.21
PDCD11-201ENST00000369797 WASHC4Q2M389 1173 aa13.76□□□□□ -0.21
PDCD11-201ENST00000369797 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
PDCD11-201ENST00000369797 PPP1R1BQ9UD71 204 aaPredicted RBP13.76□□□□□ -0.21
PDCD11-201ENST00000369797 KDM4AO75164 1064 aa13.75□□□□□ -0.21
PDCD11-201ENST00000369797 REC8O95072 547 aa13.75□□□□□ -0.21
PDCD11-201ENST00000369797 API5Q9BZZ5 524 aaKnown RBP13.75□□□□□ -0.21
PDCD11-201ENST00000369797 IPO7O95373 1038 aaKnown RBP13.75□□□□□ -0.21
PDCD11-201ENST00000369797 VPS37CA5D8V6 355 aaPredicted RBP13.75□□□□□ -0.21
PDCD11-201ENST00000369797 DDX19BQ9UMR2 479 aa13.75□□□□□ -0.21
PDCD11-201ENST00000369797 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
PDCD11-201ENST00000369797 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
PDCD11-201ENST00000369797 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
PDCD11-201ENST00000369797 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
PDCD11-201ENST00000369797 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDCD11-201ENST00000369797 IKQ13123 557 aaPredicted RBP13.74□□□□□ -0.21
PDCD11-201ENST00000369797 CCDC70Q6NSX1 233 aa13.74□□□□□ -0.21
PDCD11-201ENST00000369797 DZIP1LQ8IYY4 767 aaKnown RBP13.74□□□□□ -0.21
PDCD11-201ENST00000369797 USP47Q96K76 1375 aa13.74□□□□□ -0.21
PDCD11-201ENST00000369797 RRP1P56182 461 aaKnown RBP13.73□□□□□ -0.21
PDCD11-201ENST00000369797 PDE4AP27815 886 aa13.73□□□□□ -0.21
PDCD11-201ENST00000369797 GGNBP2Q9H3C7 697 aa13.73□□□□□ -0.21
PDCD11-201ENST00000369797 NLRP6P59044 892 aa13.72□□□□□ -0.21
PDCD11-201ENST00000369797 RALYLQ86SE5 291 aaKnown RBP13.71□□□□□ -0.21
PDCD11-201ENST00000369797 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
PDCD11-201ENST00000369797 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.22
PDCD11-201ENST00000369797 SAFBQ15424 915 aaKnown RBP eCLIP13.71□□□□□ -0.22
PDCD11-201ENST00000369797 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.22
PDCD11-201ENST00000369797 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
PDCD11-201ENST00000369797 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
PDCD11-201ENST00000369797 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
PDCD11-201ENST00000369797 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
PDCD11-201ENST00000369797 NAP1L1P55209 391 aaKnown RBP13.7□□□□□ -0.22
PDCD11-201ENST00000369797 CT47A1Q5JQC4 288 aaPredicted RBP13.7□□□□□ -0.22
PDCD11-201ENST00000369797 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.7□□□□□ -0.222e-29■■■■■ 708
PDCD11-201ENST00000369797 SMC3Q9UQE7 1217 aa13.7□□□□□ -0.22
PDCD11-201ENST00000369797 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
PDCD11-201ENST00000369797 ERC2O15083 957 aa13.69□□□□□ -0.22
PDCD11-201ENST00000369797 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms