RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
HIPK1-206ENST00000369559 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
HIPK1-206ENST00000369559 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
HIPK1-206ENST00000369559 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
HIPK1-206ENST00000369559 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
HIPK1-206ENST00000369559 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
HIPK1-206ENST00000369559 TMF1P82094 1093 aa12.9□□□□□ -0.34
HIPK1-206ENST00000369559 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
HIPK1-206ENST00000369559 FSD2A1L4K1 749 aa12.9□□□□□ -0.35
HIPK1-206ENST00000369559 PPP2R1AP30153 589 aa12.9□□□□□ -0.35
HIPK1-206ENST00000369559 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
HIPK1-206ENST00000369559 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
HIPK1-206ENST00000369559 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
HIPK1-206ENST00000369559 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
HIPK1-206ENST00000369559 RRP9O43818 475 aaKnown RBP12.88□□□□□ -0.35
HIPK1-206ENST00000369559 HSP90AA2PQ14568 343 aaPredicted RBP12.88□□□□□ -0.35
HIPK1-206ENST00000369559 BCAR3O75815 825 aa12.88□□□□□ -0.35
HIPK1-206ENST00000369559 HSP90AA1P07900 732 aaKnown RBP12.88□□□□□ -0.35
HIPK1-206ENST00000369559 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
HIPK1-206ENST00000369559 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
HIPK1-206ENST00000369559 ARXQ96QS3 562 aa12.88□□□□□ -0.35
HIPK1-206ENST00000369559 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
HIPK1-206ENST00000369559 FAM135AQ9P2D6 1515 aa12.87□□□□□ -0.35
HIPK1-206ENST00000369559 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
HIPK1-206ENST00000369559 A2MP01023 1474 aa12.87□□□□□ -0.35
HIPK1-206ENST00000369559 ABCC10Q5T3U5 1492 aa12.86□□□□□ -0.35
HIPK1-206ENST00000369559 RGL3Q3MIN7 710 aa12.86□□□□□ -0.35
HIPK1-206ENST00000369559 EIF2AK4Q9P2K8 1649 aaKnown RBP12.86□□□□□ -0.35
HIPK1-206ENST00000369559 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
HIPK1-206ENST00000369559 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
HIPK1-206ENST00000369559 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
HIPK1-206ENST00000369559 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 MCM4P33991 863 aa12.85□□□□□ -0.35
HIPK1-206ENST00000369559 NINLQ9Y2I6 1382 aa12.84□□□□□ -0.35
HIPK1-206ENST00000369559 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
HIPK1-206ENST00000369559 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
HIPK1-206ENST00000369559 E9PSI1 815 aa12.84□□□□□ -0.35
HIPK1-206ENST00000369559 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
HIPK1-206ENST00000369559 ZMYM3Q14202 1370 aa12.83□□□□□ -0.36
HIPK1-206ENST00000369559 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
HIPK1-206ENST00000369559 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
HIPK1-206ENST00000369559 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
HIPK1-206ENST00000369559 GZF1Q9H116 711 aaPredicted RBP12.83□□□□□ -0.36
HIPK1-206ENST00000369559 MRE11P49959 708 aa12.82□□□□□ -0.36
HIPK1-206ENST00000369559 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
HIPK1-206ENST00000369559 ABCA8O94911 1581 aa12.81□□□□□ -0.36
HIPK1-206ENST00000369559 APAF1O14727 1248 aa12.81□□□□□ -0.36
HIPK1-206ENST00000369559 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
HIPK1-206ENST00000369559 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
HIPK1-206ENST00000369559 PLA2R1Q13018 1463 aa12.8□□□□□ -0.36
HIPK1-206ENST00000369559 TRAK2O60296 914 aa12.8□□□□□ -0.36
HIPK1-206ENST00000369559 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
HIPK1-206ENST00000369559 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
HIPK1-206ENST00000369559 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
HIPK1-206ENST00000369559 ASXL1Q8IXJ9 1541 aa12.8□□□□□ -0.36
HIPK1-206ENST00000369559 ARHGEF5Q12774 1597 aa12.8□□□□□ -0.36
HIPK1-206ENST00000369559 CENPJQ9HC77 1338 aaPredicted RBP12.8□□□□□ -0.36
HIPK1-206ENST00000369559 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
HIPK1-206ENST00000369559 SYNMO15061 1565 aa12.79□□□□□ -0.36
HIPK1-206ENST00000369559 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
HIPK1-206ENST00000369559 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
HIPK1-206ENST00000369559 CHMP5Q9NZZ3 219 aa12.79□□□□□ -0.36
HIPK1-206ENST00000369559 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
HIPK1-206ENST00000369559 ESPNB1AK53 854 aa12.78□□□□□ -0.36
HIPK1-206ENST00000369559 AAMPQ13685 434 aa12.78□□□□□ -0.36
HIPK1-206ENST00000369559 NGEFQ8N5V2 710 aa12.78□□□□□ -0.36
HIPK1-206ENST00000369559 GRPEL1Q9HAV7 217 aa12.78□□□□□ -0.36
HIPK1-206ENST00000369559 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
HIPK1-206ENST00000369559 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.36
HIPK1-206ENST00000369559 ATP10BO94823 1461 aa12.77□□□□□ -0.36
HIPK1-206ENST00000369559 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.377e-13■■■■□ 23.4
HIPK1-206ENST00000369559 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
HIPK1-206ENST00000369559 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
HIPK1-206ENST00000369559 UHRF1BP1LA0JNW5 1464 aa12.76□□□□□ -0.37
HIPK1-206ENST00000369559 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
HIPK1-206ENST00000369559 UNC13BO14795 1591 aa12.75□□□□□ -0.37
HIPK1-206ENST00000369559 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
HIPK1-206ENST00000369559 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
HIPK1-206ENST00000369559 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
HIPK1-206ENST00000369559 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
HIPK1-206ENST00000369559 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
HIPK1-206ENST00000369559 RTEL1-TNFRSF6BF6WH68 1400 aa12.73□□□□□ -0.37
HIPK1-206ENST00000369559 TRIM44Q96DX7 344 aaPredicted RBP12.73□□□□□ -0.37
HIPK1-206ENST00000369559 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
HIPK1-206ENST00000369559 MYOM1P52179 1685 aa12.73□□□□□ -0.37
HIPK1-206ENST00000369559 TPM2P07951 284 aa12.72□□□□□ -0.37
HIPK1-206ENST00000369559 RWDD1Q9H446 243 aaPredicted RBP12.72□□□□□ -0.37
HIPK1-206ENST00000369559 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
HIPK1-206ENST00000369559 IQGAP3Q86VI3 1631 aa12.71□□□□□ -0.37
HIPK1-206ENST00000369559 ATP10AO60312 1499 aa12.71□□□□□ -0.38
HIPK1-206ENST00000369559 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.38
HIPK1-206ENST00000369559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.38
HIPK1-206ENST00000369559 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
HIPK1-206ENST00000369559 ZCCHC11Q5TAX3 1644 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms