RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 WWC1Q8IX03 1113 aa12.27□□□□□ -0.44
SIM1-202ENST00000369208 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.44
SIM1-202ENST00000369208 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.44
SIM1-202ENST00000369208 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 NASPP49321 788 aaPredicted RBP12.27□□□□□ -0.45
SIM1-202ENST00000369208 R3HCC1Q9Y3T6 440 aaKnown RBP12.27□□□□□ -0.45
SIM1-202ENST00000369208 GIMAP7Q8NHV1 300 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 INCENPQ9NQS7 918 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 H0YHG0 523 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 KIF20AO95235 890 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 PDE4AP27815 886 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 CDR1P51861 262 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 ITPRIPQ8IWB1 547 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 SMAP1Q8IYB5 467 aaPredicted RBP12.26□□□□□ -0.45
SIM1-202ENST00000369208 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 DYNC1I1O14576 645 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
SIM1-202ENST00000369208 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
SIM1-202ENST00000369208 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
SIM1-202ENST00000369208 ATF3P18847 181 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 COG3Q96JB2 828 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 ESPNB1AK53 854 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 ATP6V1DQ9Y5K8 247 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
SIM1-202ENST00000369208 SETSIPP0DME0 302 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 PDE3BQ13370 1112 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 AKAP17AQ02040 695 aaKnown RBP12.24□□□□□ -0.45
SIM1-202ENST00000369208 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 UQCRHLA0A096LP55 91 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 UQCRHP07919 91 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 DYDC1Q8WWB3 177 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
SIM1-202ENST00000369208 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 TEFQ10587 303 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
SIM1-202ENST00000369208 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
SIM1-202ENST00000369208 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 CCP110O43303 1012 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 VPS8Q8N3P4 1428 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 APBB1O00213 710 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 GTF2A1P52655 376 aaPredicted RBP12.21□□□□□ -0.45
SIM1-202ENST00000369208 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 RCAN3Q9UKA8 241 aa12.21□□□□□ -0.46
SIM1-202ENST00000369208 PSME1Q06323 249 aa12.21□□□□□ -0.46
SIM1-202ENST00000369208 PTPRGP23470 1445 aa12.21□□□□□ -0.46
SIM1-202ENST00000369208 GOLGA6L10A6NI86 522 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
SIM1-202ENST00000369208 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 PLCD4Q9BRC7 762 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 ZBED9Q6R2W3 1325 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 ZRSR2Q15696 482 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 PSMD1Q99460 953 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 MCM5P33992 734 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 MPHOSPH9Q99550 1183 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 ST18O60284 1047 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 ZNF622Q969S3 477 aaKnown RBP eCLIP12.18□□□□□ -0.46
SIM1-202ENST00000369208 LIG1P18858 919 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 KIAA0754O94854 1291 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 CAGE1Q8TC20 777 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 SLC4A10Q6U841 1118 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIM1-202ENST00000369208 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
SIM1-202ENST00000369208 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
SIM1-202ENST00000369208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIM1-202ENST00000369208 TSR1Q2NL82 804 aaKnown RBP12.17□□□□□ -0.46
SIM1-202ENST00000369208 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
SIM1-202ENST00000369208 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
SIM1-202ENST00000369208 TPM1P09493 284 aa12.17□□□□□ -0.46
SIM1-202ENST00000369208 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 CCDC91Q7Z6B0 441 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 CGNQ9P2M7 1197 aaKnown RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
SIM1-202ENST00000369208 CLCN1P35523 988 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 RUFY1Q96T51 708 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 TDO2P48775 406 aa12.14□□□□□ -0.47
SIM1-202ENST00000369208 NUCB2P80303 420 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms