RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 WWC1Q8IX03 1113 aa12.27□□□□□ -0.44
SIM1-202ENST00000369208 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.44
SIM1-202ENST00000369208 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.44
SIM1-202ENST00000369208 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 NASPP49321 788 aaPredicted RBP12.27□□□□□ -0.45
SIM1-202ENST00000369208 R3HCC1Q9Y3T6 440 aaKnown RBP12.27□□□□□ -0.45
SIM1-202ENST00000369208 GIMAP7Q8NHV1 300 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 INCENPQ9NQS7 918 aa12.27□□□□□ -0.45
SIM1-202ENST00000369208 H0YHG0 523 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 KIF20AO95235 890 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 PDE4AP27815 886 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 CDR1P51861 262 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 ITPRIPQ8IWB1 547 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 SMAP1Q8IYB5 467 aaPredicted RBP12.26□□□□□ -0.45
SIM1-202ENST00000369208 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 DYNC1I1O14576 645 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
SIM1-202ENST00000369208 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
SIM1-202ENST00000369208 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
SIM1-202ENST00000369208 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
SIM1-202ENST00000369208 ATF3P18847 181 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 COG3Q96JB2 828 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 ESPNB1AK53 854 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 ATP6V1DQ9Y5K8 247 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
SIM1-202ENST00000369208 SETSIPP0DME0 302 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 PDE3BQ13370 1112 aa12.24□□□□□ -0.45
SIM1-202ENST00000369208 AKAP17AQ02040 695 aaKnown RBP12.24□□□□□ -0.45
SIM1-202ENST00000369208 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 UQCRHLA0A096LP55 91 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 UQCRHP07919 91 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 DYDC1Q8WWB3 177 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
SIM1-202ENST00000369208 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
SIM1-202ENST00000369208 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 TEFQ10587 303 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
SIM1-202ENST00000369208 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
SIM1-202ENST00000369208 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 CCP110O43303 1012 aa12.22□□□□□ -0.45
SIM1-202ENST00000369208 VPS8Q8N3P4 1428 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 APBB1O00213 710 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 GTF2A1P52655 376 aaPredicted RBP12.21□□□□□ -0.45
SIM1-202ENST00000369208 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
SIM1-202ENST00000369208 RCAN3Q9UKA8 241 aa12.21□□□□□ -0.46
SIM1-202ENST00000369208 PSME1Q06323 249 aa12.21□□□□□ -0.46
SIM1-202ENST00000369208 PTPRGP23470 1445 aa12.21□□□□□ -0.46
SIM1-202ENST00000369208 GOLGA6L10A6NI86 522 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
SIM1-202ENST00000369208 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 PLCD4Q9BRC7 762 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 ZBED9Q6R2W3 1325 aa12.2□□□□□ -0.46
SIM1-202ENST00000369208 ZRSR2Q15696 482 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 PSMD1Q99460 953 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 MCM5P33992 734 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 MPHOSPH9Q99550 1183 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
SIM1-202ENST00000369208 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
SIM1-202ENST00000369208 ST18O60284 1047 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 ZNF622Q969S3 477 aaKnown RBP eCLIP12.18□□□□□ -0.46
SIM1-202ENST00000369208 LIG1P18858 919 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 KIAA0754O94854 1291 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 CAGE1Q8TC20 777 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 SLC4A10Q6U841 1118 aa12.18□□□□□ -0.46
SIM1-202ENST00000369208 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIM1-202ENST00000369208 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
SIM1-202ENST00000369208 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
SIM1-202ENST00000369208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIM1-202ENST00000369208 TSR1Q2NL82 804 aaKnown RBP12.17□□□□□ -0.46
SIM1-202ENST00000369208 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
SIM1-202ENST00000369208 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
SIM1-202ENST00000369208 TPM1P09493 284 aa12.17□□□□□ -0.46
SIM1-202ENST00000369208 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 CCDC91Q7Z6B0 441 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
SIM1-202ENST00000369208 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 CGNQ9P2M7 1197 aaKnown RBP12.16□□□□□ -0.46
SIM1-202ENST00000369208 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
SIM1-202ENST00000369208 CLCN1P35523 988 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 RUFY1Q96T51 708 aa12.15□□□□□ -0.46
SIM1-202ENST00000369208 TDO2P48775 406 aa12.14□□□□□ -0.47
SIM1-202ENST00000369208 NUCB2P80303 420 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms