RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
PRDM1-201ENST00000369089 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
PRDM1-201ENST00000369089 KIF16BQ96L93 1317 aa12.76□□□□□ -0.37
PRDM1-201ENST00000369089 SENP3Q9H4L4 574 aaPredicted RBP12.76□□□□□ -0.37
PRDM1-201ENST00000369089 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
PRDM1-201ENST00000369089 PMFBP1Q8TBY8 1022 aa12.76□□□□□ -0.37
PRDM1-201ENST00000369089 SECISBP2LQ93073 1101 aaKnown RBP12.76□□□□□ -0.37
PRDM1-201ENST00000369089 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
PRDM1-201ENST00000369089 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
PRDM1-201ENST00000369089 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
PRDM1-201ENST00000369089 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
PRDM1-201ENST00000369089 TPM4P67936 248 aa12.75□□□□□ -0.37
PRDM1-201ENST00000369089 RWDD1Q9H446 243 aaPredicted RBP12.75□□□□□ -0.37
PRDM1-201ENST00000369089 FOXD1Q16676 465 aa12.74□□□□□ -0.37
PRDM1-201ENST00000369089 GIMAP7Q8NHV1 300 aa12.74□□□□□ -0.37
PRDM1-201ENST00000369089 MNS1Q8NEH6 495 aa12.73□□□□□ -0.37
PRDM1-201ENST00000369089 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
PRDM1-201ENST00000369089 PKD2Q13563 968 aa12.73□□□□□ -0.37
PRDM1-201ENST00000369089 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
PRDM1-201ENST00000369089 MYCBPQ99417 103 aaPredicted RBP12.72□□□□□ -0.37
PRDM1-201ENST00000369089 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
PRDM1-201ENST00000369089 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
PRDM1-201ENST00000369089 PLIN1O60240 522 aa12.71□□□□□ -0.37
PRDM1-201ENST00000369089 IGSF3O75054 1194 aa12.71□□□□□ -0.37
PRDM1-201ENST00000369089 IFT57Q9NWB7 429 aa12.71□□□□□ -0.37
PRDM1-201ENST00000369089 CDCA8Q53HL2 280 aa12.71□□□□□ -0.38
PRDM1-201ENST00000369089 FEZ1Q99689 392 aa12.7□□□□□ -0.38
PRDM1-201ENST00000369089 RASSF4Q9H2L5 321 aa12.7□□□□□ -0.38
PRDM1-201ENST00000369089 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
PRDM1-201ENST00000369089 HSP90AB3PQ58FF7 597 aa12.7□□□□□ -0.38
PRDM1-201ENST00000369089 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
PRDM1-201ENST00000369089 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
PRDM1-201ENST00000369089 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
PRDM1-201ENST00000369089 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
PRDM1-201ENST00000369089 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
PRDM1-201ENST00000369089 CFTRP13569 1480 aa12.69□□□□□ -0.38
PRDM1-201ENST00000369089 GABPB1Q06547 395 aaPredicted RBP12.69□□□□□ -0.38
PRDM1-201ENST00000369089 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
PRDM1-201ENST00000369089 GOLIM4O00461 696 aa12.69□□□□□ -0.38
PRDM1-201ENST00000369089 NUCB2P80303 420 aa12.69□□□□□ -0.38
PRDM1-201ENST00000369089 HS1BP3Q53T59 392 aa12.69□□□□□ -0.38
PRDM1-201ENST00000369089 PAIP2Q9BPZ3 127 aaKnown RBP12.69□□□□□ -0.38
PRDM1-201ENST00000369089 H0YHG0 523 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 GTF2F1P35269 517 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRDM1-201ENST00000369089 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 KNSTRNQ9Y448 316 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 KRT222Q8N1A0 295 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 MCTP1Q6DN14 999 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 SLC26A8Q96RN1 970 aa12.68□□□□□ -0.38
PRDM1-201ENST00000369089 EFCAB2Q5VUJ9 269 aa12.67□□□□□ -0.38
PRDM1-201ENST00000369089 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
PRDM1-201ENST00000369089 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
PRDM1-201ENST00000369089 NUP155O75694 1391 aa12.66□□□□□ -0.38
PRDM1-201ENST00000369089 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
PRDM1-201ENST00000369089 ANKRD30AQ9BXX3 1397 aa12.65□□□□□ -0.38
PRDM1-201ENST00000369089 SYNJ1O43426 1573 aa12.65□□□□□ -0.38
PRDM1-201ENST00000369089 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
PRDM1-201ENST00000369089 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
PRDM1-201ENST00000369089 CT47A1Q5JQC4 288 aaPredicted RBP12.65□□□□□ -0.38
PRDM1-201ENST00000369089 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
PRDM1-201ENST00000369089 HSP90B2PQ58FF3 399 aa12.65□□□□□ -0.38
PRDM1-201ENST00000369089 CLSTN1O94985 981 aa12.64□□□□□ -0.39
PRDM1-201ENST00000369089 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
PRDM1-201ENST00000369089 HNRNPMP52272 730 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRDM1-201ENST00000369089 TXLNBQ8N3L3 684 aa12.64□□□□□ -0.39
PRDM1-201ENST00000369089 TSPY26PQ9H489 355 aa12.64□□□□□ -0.39
PRDM1-201ENST00000369089 ZKSCAN5Q9Y2L8 839 aa12.64□□□□□ -0.39
PRDM1-201ENST00000369089 MBD3O95983 291 aa12.63□□□□□ -0.39
PRDM1-201ENST00000369089 TPD52L1Q16890 204 aaPredicted RBP12.63□□□□□ -0.39
PRDM1-201ENST00000369089 PSMD1Q99460 953 aa12.63□□□□□ -0.39
PRDM1-201ENST00000369089 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
PRDM1-201ENST00000369089 PRDM4Q9UKN5 801 aa12.63□□□□□ -0.39
PRDM1-201ENST00000369089 RNF20Q5VTR2 975 aa12.62□□□□□ -0.39
PRDM1-201ENST00000369089 KANK1Q14678 1352 aa12.62□□□□□ -0.39
PRDM1-201ENST00000369089 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
PRDM1-201ENST00000369089 KIF21BO75037 1637 aa12.62□□□□□ -0.39
PRDM1-201ENST00000369089 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
PRDM1-201ENST00000369089 SRPK2P78362 688 aaKnown RBP12.61□□□□□ -0.39
PRDM1-201ENST00000369089 ST18O60284 1047 aa12.61□□□□□ -0.39
PRDM1-201ENST00000369089 MPHOSPH10O00566 681 aaKnown RBP12.61□□□□□ -0.39
PRDM1-201ENST00000369089 MCCP23508 829 aa12.6□□□□□ -0.39
PRDM1-201ENST00000369089 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
PRDM1-201ENST00000369089 GGT6Q6P531 493 aa12.6□□□□□ -0.39
PRDM1-201ENST00000369089 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
PRDM1-201ENST00000369089 ZNF830Q96NB3 372 aaPredicted RBP12.6□□□□□ -0.39
PRDM1-201ENST00000369089 RSPH14Q9UHP6 348 aa12.6□□□□□ -0.39
PRDM1-201ENST00000369089 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
PRDM1-201ENST00000369089 TMF1P82094 1093 aa12.6□□□□□ -0.39
PRDM1-201ENST00000369089 CGNL1Q0VF96 1302 aa12.6□□□□□ -0.39
PRDM1-201ENST00000369089 HMGXB3Q12766 1538 aa12.6□□□□□ -0.39
PRDM1-201ENST00000369089 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
PRDM1-201ENST00000369089 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
PRDM1-201ENST00000369089 DNAAF4Q8WXU2 420 aa12.59□□□□□ -0.39
PRDM1-201ENST00000369089 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.39
PRDM1-201ENST00000369089 MNAT1P51948 309 aa12.58□□□□□ -0.4
PRDM1-201ENST00000369089 CCAR2Q8N163 923 aaKnown RBP12.58□□□□□ -0.4
PRDM1-201ENST00000369089 NESP48681 1621 aa12.58□□□□□ -0.4
PRDM1-201ENST00000369089 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms