RNA–Protein interactions for RNA: ENST00000369023.7

NSMCE4A-202, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-202ENST00000369023 SCAF11Q99590 1463 aaKnown RBP35.24■■■■□ 3.23
NSMCE4A-202ENST00000369023 PPP1R15AO75807 674 aaPredicted RBP35.23■■■■□ 3.23
NSMCE4A-202ENST00000369023 ZFYVE9O95405 1425 aa35.22■■■■□ 3.23
NSMCE4A-202ENST00000369023 LTKP29376 864 aa35.22■■■■□ 3.23
NSMCE4A-202ENST00000369023 RGL3Q3MIN7 710 aa35.22■■■■□ 3.23
NSMCE4A-202ENST00000369023 CLSPNQ9HAW4 1339 aa35.18■■■■□ 3.22
NSMCE4A-202ENST00000369023 MED14O60244 1454 aa35.16■■■■□ 3.22
NSMCE4A-202ENST00000369023 VGFO15240 615 aaPredicted RBP35.15■■■■□ 3.22
NSMCE4A-202ENST00000369023 MYO5BQ9ULV0 1848 aa35.15■■■■□ 3.22
NSMCE4A-202ENST00000369023 NPHP4O75161 1426 aaPredicted RBP35.14■■■■□ 3.22
NSMCE4A-202ENST00000369023 CCER1Q8TC90 406 aaPredicted RBP35.14■■■■□ 3.22
NSMCE4A-202ENST00000369023 SIN3AQ96ST3 1273 aa35.13■■■■□ 3.21
NSMCE4A-202ENST00000369023 STRCQ7RTU9 1775 aa35.12■■■■□ 3.21
NSMCE4A-202ENST00000369023 NEUROD1Q13562 356 aa35.12■■■■□ 3.21
NSMCE4A-202ENST00000369023 NUTM2DQ5VT03 806 aaPredicted RBP35.12■■■■□ 3.21
NSMCE4A-202ENST00000369023 PLEKHG1Q9ULL1 1385 aa35.11■■■■□ 3.21
NSMCE4A-202ENST00000369023 NEXMIFQ5QGS0 1516 aa35.1■■■■□ 3.21
NSMCE4A-202ENST00000369023 POLR1AO95602 1720 aaPredicted RBP35.1■■■■□ 3.21
NSMCE4A-202ENST00000369023 BCANQ96GW7 911 aa35.1■■■■□ 3.21
NSMCE4A-202ENST00000369023 STAC3Q96MF2 364 aa35.09■■■■□ 3.21
NSMCE4A-202ENST00000369023 DCAF11Q8TEB1 546 aa35.01■■■■□ 3.2
NSMCE4A-202ENST00000369023 IQGAP1P46940 1657 aa35■■■■□ 3.19
NSMCE4A-202ENST00000369023 MYOM2P54296 1465 aa34.97■■■■□ 3.19
NSMCE4A-202ENST00000369023 PPLO60437 1756 aa34.97■■■■□ 3.19
NSMCE4A-202ENST00000369023 ADGRF5Q8IZF2 1346 aa34.96■■■■□ 3.19
NSMCE4A-202ENST00000369023 TONSLQ96HA7 1378 aa34.95■■■■□ 3.19
NSMCE4A-202ENST00000369023 SLC26A8Q96RN1 970 aa34.95■■■■□ 3.19
NSMCE4A-202ENST00000369023 KDM2AQ9Y2K7 1162 aa34.95■■■■□ 3.19
NSMCE4A-202ENST00000369023 TBX22Q9Y458 520 aa34.95■■■■□ 3.19
NSMCE4A-202ENST00000369023 L3MBTL2Q969R5 705 aa34.94■■■■□ 3.18
NSMCE4A-202ENST00000369023 SENP3Q9H4L4 574 aaPredicted RBP34.93■■■■□ 3.18
NSMCE4A-202ENST00000369023 SETBP1Q9Y6X0 1596 aa34.92■■■■□ 3.18
NSMCE4A-202ENST00000369023 IFT172Q9UG01 1749 aa34.91■■■■□ 3.18
NSMCE4A-202ENST00000369023 ADAMTS13Q76LX8 1427 aa34.9■■■■□ 3.18
NSMCE4A-202ENST00000369023 NRXN1Q9ULB1 1477 aa34.88■■■■□ 3.17
NSMCE4A-202ENST00000369023 DIP2AQ14689 1571 aa34.88■■■■□ 3.17
NSMCE4A-202ENST00000369023 TIMELESSQ9UNS1 1208 aa34.87■■■■□ 3.17
NSMCE4A-202ENST00000369023 PIK3C2GO75747 1445 aa34.87■■■■□ 3.17
NSMCE4A-202ENST00000369023 PIK3R4Q99570 1358 aa34.84■■■■□ 3.17
NSMCE4A-202ENST00000369023 C14orf93Q9H972 538 aaKnown RBP34.8■■■■□ 3.16
NSMCE4A-202ENST00000369023 ZNF335Q9H4Z2 1342 aaPredicted RBP34.8■■■■□ 3.16
NSMCE4A-202ENST00000369023 NRXN3Q9Y4C0 1643 aa34.8■■■■□ 3.16
NSMCE4A-202ENST00000369023 KCNA6P17658 529 aa34.78■■■■□ 3.16
NSMCE4A-202ENST00000369023 ALKQ9UM73 1620 aa34.78■■■■□ 3.16
NSMCE4A-202ENST00000369023 PRAG1Q86YV5 1406 aa34.75■■■■□ 3.15
NSMCE4A-202ENST00000369023 METP08581 1390 aa34.75■■■■□ 3.15
NSMCE4A-202ENST00000369023 CFAP70Q5T0N1 1121 aa34.74■■■■□ 3.15
NSMCE4A-202ENST00000369023 LAMC1P11047 1609 aa34.69■■■■□ 3.14
NSMCE4A-202ENST00000369023 AMOTL2Q9Y2J4 779 aa34.69■■■■□ 3.14
NSMCE4A-202ENST00000369023 CPS1P31327 1500 aa34.67■■■■□ 3.14
NSMCE4A-202ENST00000369023 PTPRUQ92729 1446 aa34.64■■■■□ 3.14
NSMCE4A-202ENST00000369023 NWD1Q149M9 1564 aa34.64■■■■□ 3.14
NSMCE4A-202ENST00000369023 NKTRP30414 1462 aaKnown RBP34.63■■■■□ 3.13
NSMCE4A-202ENST00000369023 TMEM132EQ6IEE7 984 aa34.63■■■■□ 3.13
NSMCE4A-202ENST00000369023 SETD1AO15047 1707 aaKnown RBP34.63■■■■□ 3.13
NSMCE4A-202ENST00000369023 LTBP4Q8N2S1 1624 aa34.62■■■■□ 3.13
NSMCE4A-202ENST00000369023 LRPPRCP42704 1394 aaKnown RBP34.61■■■■□ 3.13
NSMCE4A-202ENST00000369023 NBPF8Q3BBV2 869 aa34.59■■■■□ 3.13
NSMCE4A-202ENST00000369023 PROSER2Q86WR7 435 aaPredicted RBP34.59■■■■□ 3.13
NSMCE4A-202ENST00000369023 CHD2O14647 1828 aaKnown RBP34.59■■■■□ 3.13
NSMCE4A-202ENST00000369023 YTHDC2Q9H6S0 1430 aaKnown RBP34.58■■■■□ 3.13
NSMCE4A-202ENST00000369023 ABCC11Q96J66 1382 aa34.57■■■■□ 3.13
NSMCE4A-202ENST00000369023 KIAA1210Q9ULL0 1709 aa34.56■■■■□ 3.12
NSMCE4A-202ENST00000369023 ASXL1Q8IXJ9 1541 aa34.56■■■■□ 3.12
NSMCE4A-202ENST00000369023 STK26Q9P289 416 aa34.56■■■■□ 3.12
NSMCE4A-202ENST00000369023 ADGRB1O14514 1584 aa34.54■■■■□ 3.12
NSMCE4A-202ENST00000369023 PTCH1Q13635 1447 aa34.54■■■■□ 3.12
NSMCE4A-202ENST00000369023 NBPF1Q3BBV0 1214 aa34.53■■■■□ 3.12
NSMCE4A-202ENST00000369023 ROCK2O75116 1388 aaKnown RBP34.53■■■■□ 3.12
NSMCE4A-202ENST00000369023 TECPR2O15040 1411 aa34.53■■■■□ 3.12
NSMCE4A-202ENST00000369023 XRN1Q8IZH2 1706 aaKnown RBP34.53■■■■□ 3.12
NSMCE4A-202ENST00000369023 CERKQ8TCT0 537 aa34.52■■■■□ 3.12
NSMCE4A-202ENST00000369023 LRRC7Q96NW7 1537 aa34.52■■■■□ 3.12
NSMCE4A-202ENST00000369023 STRCP1A6NGW2 1772 aa34.51■■■■□ 3.11
NSMCE4A-202ENST00000369023 SIRT1Q96EB6 747 aa34.5■■■■□ 3.11
NSMCE4A-202ENST00000369023 NCOA3Q9Y6Q9 1424 aa34.5■■■■□ 3.11
NSMCE4A-202ENST00000369023 TMEM94Q12767 1356 aa34.5■■■■□ 3.11
NSMCE4A-202ENST00000369023 RALGAPBQ86X10 1494 aa34.47■■■■□ 3.11
NSMCE4A-202ENST00000369023 ROBO2Q9HCK4 1378 aa34.47■■■■□ 3.11
NSMCE4A-202ENST00000369023 TRAK1Q9UPV9 953 aa34.47■■■■□ 3.11
NSMCE4A-202ENST00000369023 IQSEC2Q5JU85 1478 aa34.46■■■■□ 3.11
NSMCE4A-202ENST00000369023 TRPM1Q7Z4N2 1603 aa34.46■■■■□ 3.11
NSMCE4A-202ENST00000369023 GPRASP1Q5JY77 1395 aa34.45■■■■□ 3.11
NSMCE4A-202ENST00000369023 FAM135BQ49AJ0 1406 aa34.45■■■■□ 3.11
NSMCE4A-202ENST00000369023 C14orf37Q86TY3 774 aa34.44■■■■□ 3.1
NSMCE4A-202ENST00000369023 DLC1Q96QB1 1528 aa34.43■■■■□ 3.1
NSMCE4A-202ENST00000369023 CARD11Q9BXL7 1154 aa34.42■■■■□ 3.1
NSMCE4A-202ENST00000369023 RBM33Q96EV2 1170 aaKnown RBP34.41■■■■□ 3.1
NSMCE4A-202ENST00000369023 KNDC1Q76NI1 1749 aa34.41■■■■□ 3.1
NSMCE4A-202ENST00000369023 POGKQ9P215 609 aa34.4■■■■□ 3.1
NSMCE4A-202ENST00000369023 PRAM1Q96QH2 718 aa34.38■■■■□ 3.09
NSMCE4A-202ENST00000369023 MSH6P52701 1360 aa34.38■■■■□ 3.09
NSMCE4A-202ENST00000369023 WAPLQ7Z5K2 1190 aa34.37■■■■□ 3.09
NSMCE4A-202ENST00000369023 C19orf44Q9H6X5 657 aa34.36■■■■□ 3.09
NSMCE4A-202ENST00000369023 EIF3AQ14152 1382 aaKnown RBP34.34■■■■□ 3.09
NSMCE4A-202ENST00000369023 ADGRL3Q9HAR2 1447 aa34.32■■■■□ 3.09
NSMCE4A-202ENST00000369023 PLEKHH1Q9ULM0 1364 aa34.32■■■■□ 3.08
NSMCE4A-202ENST00000369023 ATF3P18847 181 aa34.28■■■■□ 3.08
NSMCE4A-202ENST00000369023 SAFB2Q14151 953 aaKnown RBP eCLIP34.28■■■■□ 3.08
NSMCE4A-202ENST00000369023 CADPS2Q86UW7 1296 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms