RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 VGFO15240 615 aaPredicted RBP36.17■■■■□ 3.38
NSMCE4A-201ENST00000369017 SLIT1O75093 1534 aa36.17■■■■□ 3.38
NSMCE4A-201ENST00000369017 LMTK3Q96Q04 1460 aa36.15■■■■□ 3.38
NSMCE4A-201ENST00000369017 DCAF11Q8TEB1 546 aa36.14■■■■□ 3.38
NSMCE4A-201ENST00000369017 RIMS2Q9UQ26 1411 aa36.14■■■■□ 3.38
NSMCE4A-201ENST00000369017 ARHGAP23Q9P227 1491 aa36.12■■■■□ 3.37
NSMCE4A-201ENST00000369017 PPP1R15AO75807 674 aaPredicted RBP36.12■■■■□ 3.37
NSMCE4A-201ENST00000369017 ANKLE2Q86XL3 938 aa36.12■■■■□ 3.37
NSMCE4A-201ENST00000369017 L3MBTL2Q969R5 705 aa36.12■■■■□ 3.37
NSMCE4A-201ENST00000369017 PPLO60437 1756 aa36.1■■■■□ 3.37
NSMCE4A-201ENST00000369017 NEXMIFQ5QGS0 1516 aa36.1■■■■□ 3.37
NSMCE4A-201ENST00000369017 ZFYVE9O95405 1425 aa36.08■■■■□ 3.37
NSMCE4A-201ENST00000369017 ZEB1P37275 1124 aaPredicted RBP36.08■■■■□ 3.37
NSMCE4A-201ENST00000369017 TXNDC2Q86VQ3 553 aa36.08■■■■□ 3.37
NSMCE4A-201ENST00000369017 IFT172Q9UG01 1749 aa36.08■■■■□ 3.37
NSMCE4A-201ENST00000369017 MYOM2P54296 1465 aa36.06■■■■□ 3.36
NSMCE4A-201ENST00000369017 KDM2AQ9Y2K7 1162 aa36.04■■■■□ 3.36
NSMCE4A-201ENST00000369017 SCAF11Q99590 1463 aaKnown RBP36.04■■■■□ 3.36
NSMCE4A-201ENST00000369017 POLR1AO95602 1720 aaPredicted RBP35.98■■■■□ 3.35
NSMCE4A-201ENST00000369017 HSPA2P54652 639 aa35.97■■■■□ 3.35
NSMCE4A-201ENST00000369017 LTKP29376 864 aa35.96■■■■□ 3.35
NSMCE4A-201ENST00000369017 PLEKHG1Q9ULL1 1385 aa35.96■■■■□ 3.35
NSMCE4A-201ENST00000369017 NUTM2DQ5VT03 806 aaPredicted RBP35.95■■■■□ 3.35
NSMCE4A-201ENST00000369017 BCANQ96GW7 911 aa35.95■■■■□ 3.35
NSMCE4A-201ENST00000369017 NRXN1Q9ULB1 1477 aa35.92■■■■□ 3.34
NSMCE4A-201ENST00000369017 ADGRF5Q8IZF2 1346 aa35.92■■■■□ 3.34
NSMCE4A-201ENST00000369017 MED14O60244 1454 aa35.92■■■■□ 3.34
NSMCE4A-201ENST00000369017 DMRT2Q9Y5R5 561 aa35.89■■■■□ 3.34
NSMCE4A-201ENST00000369017 PIK3C2GO75747 1445 aa35.89■■■■□ 3.34
NSMCE4A-201ENST00000369017 PRAG1Q86YV5 1406 aa35.89■■■■□ 3.34
NSMCE4A-201ENST00000369017 NCKAP5LQ9HCH0 1330 aa35.87■■■■□ 3.33
NSMCE4A-201ENST00000369017 NPHP4O75161 1426 aaPredicted RBP35.87■■■■□ 3.33
NSMCE4A-201ENST00000369017 SETBP1Q9Y6X0 1596 aa35.87■■■■□ 3.33
NSMCE4A-201ENST00000369017 LAMC1P11047 1609 aa35.86■■■■□ 3.33
NSMCE4A-201ENST00000369017 IQGAP1P46940 1657 aa35.83■■■■□ 3.33
NSMCE4A-201ENST00000369017 DIP2AQ14689 1571 aa35.82■■■■□ 3.32
NSMCE4A-201ENST00000369017 KIAA1210Q9ULL0 1709 aa35.82■■■■□ 3.32
NSMCE4A-201ENST00000369017 C14orf93Q9H972 538 aaKnown RBP35.81■■■■□ 3.32
NSMCE4A-201ENST00000369017 TBX22Q9Y458 520 aa35.8■■■■□ 3.32
NSMCE4A-201ENST00000369017 STRCQ7RTU9 1775 aa35.79■■■■□ 3.32
NSMCE4A-201ENST00000369017 ALKQ9UM73 1620 aa35.76■■■■□ 3.32
NSMCE4A-201ENST00000369017 NBPF8Q3BBV2 869 aa35.74■■■■□ 3.31
NSMCE4A-201ENST00000369017 NRXN3Q9Y4C0 1643 aa35.73■■■■□ 3.31
NSMCE4A-201ENST00000369017 CFAP70Q5T0N1 1121 aa35.73■■■■□ 3.31
NSMCE4A-201ENST00000369017 SLC26A8Q96RN1 970 aa35.72■■■■□ 3.31
NSMCE4A-201ENST00000369017 PIK3R4Q99570 1358 aa35.72■■■■□ 3.31
NSMCE4A-201ENST00000369017 ADAMTS13Q76LX8 1427 aa35.72■■■■□ 3.31
NSMCE4A-201ENST00000369017 TRPM1Q7Z4N2 1603 aa35.72■■■■□ 3.31
NSMCE4A-201ENST00000369017 ROCK2O75116 1388 aaKnown RBP35.7■■■■□ 3.31
NSMCE4A-201ENST00000369017 RALGAPBQ86X10 1494 aa35.7■■■■□ 3.31
NSMCE4A-201ENST00000369017 SENP3Q9H4L4 574 aaPredicted RBP35.69■■■■□ 3.3
NSMCE4A-201ENST00000369017 SETD1AO15047 1707 aaKnown RBP35.63■■■■□ 3.29
NSMCE4A-201ENST00000369017 GPRASP1Q5JY77 1395 aa35.61■■■■□ 3.29
NSMCE4A-201ENST00000369017 CARD11Q9BXL7 1154 aa35.6■■■■□ 3.29
NSMCE4A-201ENST00000369017 NBPF1Q3BBV0 1214 aa35.59■■■■□ 3.29
NSMCE4A-201ENST00000369017 METP08581 1390 aa35.59■■■■□ 3.29
NSMCE4A-201ENST00000369017 ADGRB1O14514 1584 aa35.57■■■■□ 3.28
NSMCE4A-201ENST00000369017 TMEM132EQ6IEE7 984 aa35.57■■■■□ 3.28
NSMCE4A-201ENST00000369017 LRPPRCP42704 1394 aaKnown RBP35.55■■■■□ 3.28
NSMCE4A-201ENST00000369017 YTHDC2Q9H6S0 1430 aaKnown RBP35.55■■■■□ 3.28
NSMCE4A-201ENST00000369017 KCNA6P17658 529 aa35.54■■■■□ 3.28
NSMCE4A-201ENST00000369017 EIF3AQ14152 1382 aaKnown RBP35.52■■■■□ 3.28
NSMCE4A-201ENST00000369017 ABCC11Q96J66 1382 aa35.52■■■■□ 3.28
NSMCE4A-201ENST00000369017 CHD2O14647 1828 aaKnown RBP35.52■■■■□ 3.28
NSMCE4A-201ENST00000369017 AMOTL2Q9Y2J4 779 aa35.51■■■■□ 3.28
NSMCE4A-201ENST00000369017 ASXL1Q8IXJ9 1541 aa35.5■■■■□ 3.27
NSMCE4A-201ENST00000369017 SIRT1Q96EB6 747 aa35.49■■■■□ 3.27
NSMCE4A-201ENST00000369017 STK26Q9P289 416 aa35.48■■■■□ 3.27
NSMCE4A-201ENST00000369017 KNDC1Q76NI1 1749 aa35.46■■■■□ 3.27
NSMCE4A-201ENST00000369017 TECPR2O15040 1411 aa35.46■■■■□ 3.27
NSMCE4A-201ENST00000369017 TRAK1Q9UPV9 953 aa35.45■■■■□ 3.27
NSMCE4A-201ENST00000369017 DLC1Q96QB1 1528 aa35.45■■■■□ 3.27
NSMCE4A-201ENST00000369017 NWD1Q149M9 1564 aa35.45■■■■□ 3.27
NSMCE4A-201ENST00000369017 NKTRP30414 1462 aaKnown RBP35.43■■■■□ 3.26
NSMCE4A-201ENST00000369017 PTPRUQ92729 1446 aa35.43■■■■□ 3.26
NSMCE4A-201ENST00000369017 XRN1Q8IZH2 1706 aaKnown RBP35.43■■■■□ 3.26
NSMCE4A-201ENST00000369017 PTCH1Q13635 1447 aa35.42■■■■□ 3.26
NSMCE4A-201ENST00000369017 EIF4G2P78344 907 aaKnown RBP eCLIP35.42■■■■□ 3.26
NSMCE4A-201ENST00000369017 FAM135BQ49AJ0 1406 aa35.41■■■■□ 3.26
NSMCE4A-201ENST00000369017 SLC24A1O60721 1099 aa35.41■■■■□ 3.26
NSMCE4A-201ENST00000369017 CPS1P31327 1500 aa35.41■■■■□ 3.26
NSMCE4A-201ENST00000369017 POGKQ9P215 609 aa35.39■■■■□ 3.26
NSMCE4A-201ENST00000369017 USP47Q96K76 1375 aa35.38■■■■□ 3.26
NSMCE4A-201ENST00000369017 ARHGEF28Q8N1W1 1705 aaKnown RBP35.35■■■■□ 3.25
NSMCE4A-201ENST00000369017 ZNF335Q9H4Z2 1342 aaPredicted RBP35.34■■■■□ 3.25
NSMCE4A-201ENST00000369017 CENPJQ9HC77 1338 aaPredicted RBP35.33■■■■□ 3.25
NSMCE4A-201ENST00000369017 PROSER2Q86WR7 435 aaPredicted RBP35.33■■■■□ 3.25
NSMCE4A-201ENST00000369017 PRAM1Q96QH2 718 aa35.32■■■■□ 3.24
NSMCE4A-201ENST00000369017 NCOA3Q9Y6Q9 1424 aa35.31■■■■□ 3.24
NSMCE4A-201ENST00000369017 ROBO2Q9HCK4 1378 aa35.3■■■■□ 3.24
NSMCE4A-201ENST00000369017 STRCP1A6NGW2 1772 aa35.26■■■■□ 3.24
NSMCE4A-201ENST00000369017 ST20-MTHFSA0A0A6YYL1 179 aa35.26■■■■□ 3.24
NSMCE4A-201ENST00000369017 WAPLQ7Z5K2 1190 aa35.25■■■■□ 3.23
NSMCE4A-201ENST00000369017 SBNO2Q9Y2G9 1366 aa35.24■■■■□ 3.23
NSMCE4A-201ENST00000369017 HSPA5P11021 654 aaKnown RBP35.23■■■■□ 3.23
NSMCE4A-201ENST00000369017 C14orf37Q86TY3 774 aa35.22■■■■□ 3.23
NSMCE4A-201ENST00000369017 QRICH2Q9H0J4 1663 aa35.21■■■■□ 3.23
NSMCE4A-201ENST00000369017 SAFB2Q14151 953 aaKnown RBP eCLIP35.19■■■■□ 3.22
NSMCE4A-201ENST00000369017 TMEM94Q12767 1356 aa35.18■■■■□ 3.22
NSMCE4A-201ENST00000369017 LRRC7Q96NW7 1537 aa35.17■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms