RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 MSH5O43196 834 aa13.28□□□□□ -0.28
SCNM1-201ENST00000368902 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
SCNM1-201ENST00000368902 NOS1P29475 1434 aa13.28□□□□□ -0.28
SCNM1-201ENST00000368902 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.28
SCNM1-201ENST00000368902 KCNA6P17658 529 aa13.26□□□□□ -0.29
SCNM1-201ENST00000368902 MSH6P52701 1360 aa13.26□□□□□ -0.29
SCNM1-201ENST00000368902 PHLPP1O60346 1717 aa13.25□□□□□ -0.29
SCNM1-201ENST00000368902 ADRA2BP18089 450 aa13.25□□□□□ -0.29
SCNM1-201ENST00000368902 IDI1Q13907 227 aa13.25□□□□□ -0.29
SCNM1-201ENST00000368902 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
SCNM1-201ENST00000368902 GCC2Q8IWJ2 1684 aa13.24□□□□□ -0.29
SCNM1-201ENST00000368902 RPRD2Q5VT52 1461 aaKnown RBP13.24□□□□□ -0.29
SCNM1-201ENST00000368902 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
SCNM1-201ENST00000368902 ZFYVE9O95405 1425 aa13.23□□□□□ -0.29
SCNM1-201ENST00000368902 POTEAQ6S8J7 498 aa13.23□□□□□ -0.29
SCNM1-201ENST00000368902 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
SCNM1-201ENST00000368902 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
SCNM1-201ENST00000368902 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
SCNM1-201ENST00000368902 NUP155O75694 1391 aa13.21□□□□□ -0.29
SCNM1-201ENST00000368902 JCADQ9P266 1359 aa13.21□□□□□ -0.29
SCNM1-201ENST00000368902 PLEKHG1Q9ULL1 1385 aa13.21□□□□□ -0.29
SCNM1-201ENST00000368902 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
SCNM1-201ENST00000368902 BCANQ96GW7 911 aa13.2□□□□□ -0.3
SCNM1-201ENST00000368902 RIMS2Q9UQ26 1411 aa13.2□□□□□ -0.3
SCNM1-201ENST00000368902 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
SCNM1-201ENST00000368902 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
SCNM1-201ENST00000368902 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
SCNM1-201ENST00000368902 LRP6O75581 1613 aa13.19□□□□□ -0.3
SCNM1-201ENST00000368902 UNC13BO14795 1591 aa13.19□□□□□ -0.3
SCNM1-201ENST00000368902 DIP2AQ14689 1571 aa13.19□□□□□ -0.3
SCNM1-201ENST00000368902 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
SCNM1-201ENST00000368902 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
SCNM1-201ENST00000368902 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
SCNM1-201ENST00000368902 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
SCNM1-201ENST00000368902 SHPRHQ149N8 1683 aa13.15□□□□□ -0.3
SCNM1-201ENST00000368902 NAIPQ13075 1403 aa13.15□□□□□ -0.3
SCNM1-201ENST00000368902 NCOA3Q9Y6Q9 1424 aa13.15□□□□□ -0.3
SCNM1-201ENST00000368902 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCNM1-201ENST00000368902 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
SCNM1-201ENST00000368902 TRPM2O94759 1503 aa13.13□□□□□ -0.31
SCNM1-201ENST00000368902 E9PCH4 1651 aa13.13□□□□□ -0.31
SCNM1-201ENST00000368902 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
SCNM1-201ENST00000368902 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
SCNM1-201ENST00000368902 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
SCNM1-201ENST00000368902 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
SCNM1-201ENST00000368902 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
SCNM1-201ENST00000368902 IQGAP3Q86VI3 1631 aa13.12□□□□□ -0.31
SCNM1-201ENST00000368902 HFM1A2PYH4 1435 aa13.12□□□□□ -0.31
SCNM1-201ENST00000368902 PIK3R4Q99570 1358 aa13.11□□□□□ -0.31
SCNM1-201ENST00000368902 MEX3CQ5U5Q3 659 aaKnown RBP13.11□□□□□ -0.31
SCNM1-201ENST00000368902 XRN1Q8IZH2 1706 aaKnown RBP13.1□□□□□ -0.31
SCNM1-201ENST00000368902 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
SCNM1-201ENST00000368902 DCCP43146 1447 aa13.09□□□□□ -0.31
SCNM1-201ENST00000368902 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
SCNM1-201ENST00000368902 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
SCNM1-201ENST00000368902 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
SCNM1-201ENST00000368902 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
SCNM1-201ENST00000368902 ATF3P18847 181 aa13.07□□□□□ -0.32
SCNM1-201ENST00000368902 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
SCNM1-201ENST00000368902 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
SCNM1-201ENST00000368902 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
SCNM1-201ENST00000368902 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
SCNM1-201ENST00000368902 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
SCNM1-201ENST00000368902 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
SCNM1-201ENST00000368902 ACIN1Q9UKV3 1341 aaKnown RBP13.05□□□□□ -0.32
SCNM1-201ENST00000368902 BRINP3Q76B58 766 aa13.04□□□□□ -0.32
SCNM1-201ENST00000368902 MPHOSPH9Q99550 1183 aa13.04□□□□□ -0.32
SCNM1-201ENST00000368902 MST1RQ04912 1400 aa13.04□□□□□ -0.32
SCNM1-201ENST00000368902 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
SCNM1-201ENST00000368902 SPHKAPQ2M3C7 1700 aa13.03□□□□□ -0.32
SCNM1-201ENST00000368902 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCNM1-201ENST00000368902 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
SCNM1-201ENST00000368902 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
SCNM1-201ENST00000368902 NALCNQ8IZF0 1738 aa13.02□□□□□ -0.33
SCNM1-201ENST00000368902 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
SCNM1-201ENST00000368902 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
SCNM1-201ENST00000368902 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
SCNM1-201ENST00000368902 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
SCNM1-201ENST00000368902 RGS12O14924 1447 aa13.01□□□□□ -0.33
SCNM1-201ENST00000368902 AFF2P51816 1311 aa13□□□□□ -0.33
SCNM1-201ENST00000368902 RXRBP28702 533 aa13□□□□□ -0.33
SCNM1-201ENST00000368902 PNPLA6Q8IY17 1366 aa12.98□□□□□ -0.33
SCNM1-201ENST00000368902 HRCP23327 699 aa12.98□□□□□ -0.33
SCNM1-201ENST00000368902 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
SCNM1-201ENST00000368902 METP08581 1390 aa12.97□□□□□ -0.33
SCNM1-201ENST00000368902 RAB3GAP2Q9H2M9 1393 aa12.97□□□□□ -0.33
SCNM1-201ENST00000368902 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
SCNM1-201ENST00000368902 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
SCNM1-201ENST00000368902 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
SCNM1-201ENST00000368902 PTCH1Q13635 1447 aa12.96□□□□□ -0.34
SCNM1-201ENST00000368902 C8orf37Q96NL8 207 aa12.95□□□□□ -0.34
SCNM1-201ENST00000368902 LAMC1P11047 1609 aa12.95□□□□□ -0.34
SCNM1-201ENST00000368902 KIF1BO60333 1816 aa12.94□□□□□ -0.34
SCNM1-201ENST00000368902 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
SCNM1-201ENST00000368902 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
SCNM1-201ENST00000368902 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
SCNM1-201ENST00000368902 LRRC59Q96AG4 307 aaKnown RBP12.93□□□□□ -0.34
SCNM1-201ENST00000368902 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
SCNM1-201ENST00000368902 DDX17Q92841 729 aaKnown RBP12.92□□□□□ -0.34
SCNM1-201ENST00000368902 RBM6P78332 1123 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms