RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ADGRF5Q8IZF2 1346 aa27.28■■□□□ 1.96
CHTOP-204ENST00000368694 KIAA1210Q9ULL0 1709 aa27.27■■□□□ 1.96
CHTOP-204ENST00000368694 NEXMIFQ5QGS0 1516 aa27.26■■□□□ 1.95
CHTOP-204ENST00000368694 STAG3Q9UJ98 1225 aa27.26■■□□□ 1.95
CHTOP-204ENST00000368694 NRXN1Q9ULB1 1477 aa27.25■■□□□ 1.95
CHTOP-204ENST00000368694 POLR1AO95602 1720 aaPredicted RBP27.25■■□□□ 1.95
CHTOP-204ENST00000368694 DDX10Q13206 875 aaKnown RBP27.25■■□□□ 1.95
CHTOP-204ENST00000368694 C3P01024 1663 aa27.24■■□□□ 1.95
CHTOP-204ENST00000368694 TNRQ92752 1358 aa27.22■■□□□ 1.95
CHTOP-204ENST00000368694 WASHC2AQ641Q2 1341 aa27.2■■□□□ 1.94
CHTOP-204ENST00000368694 NUTM2DQ5VT03 806 aaPredicted RBP27.2■■□□□ 1.94
CHTOP-204ENST00000368694 ST20-MTHFSA0A0A6YYL1 179 aa27.19■■□□□ 1.94
CHTOP-204ENST00000368694 VGFO15240 615 aaPredicted RBP27.19■■□□□ 1.94
CHTOP-204ENST00000368694 PIK3C2GO75747 1445 aa27.19■■□□□ 1.94
CHTOP-204ENST00000368694 CEBPAP49715 358 aaPredicted RBP27.18■■□□□ 1.94
CHTOP-204ENST00000368694 CFAP70Q5T0N1 1121 aa27.18■■□□□ 1.94
CHTOP-204ENST00000368694 IQGAP1P46940 1657 aa27.17■■□□□ 1.94
CHTOP-204ENST00000368694 PLPPR3Q6T4P5 718 aa27.17■■□□□ 1.94
CHTOP-204ENST00000368694 A2ML1A8K2U0 1454 aa27.16■■□□□ 1.94
CHTOP-204ENST00000368694 C11orf95C9JLR9 678 aaPredicted RBP27.16■■□□□ 1.94
CHTOP-204ENST00000368694 RIMS1Q86UR5 1692 aaKnown RBP27.15■■□□□ 1.94
CHTOP-204ENST00000368694 CCDC7Q96M83 1385 aa27.14■■□□□ 1.94
CHTOP-204ENST00000368694 KIF7Q2M1P5 1343 aa27.12■■□□□ 1.93
CHTOP-204ENST00000368694 ZFYVE9O95405 1425 aa27.12■■□□□ 1.93
CHTOP-204ENST00000368694 SCAF11Q99590 1463 aaKnown RBP27.11■■□□□ 1.93
CHTOP-204ENST00000368694 PELP1Q8IZL8 1130 aaKnown RBP27.11■■□□□ 1.93
CHTOP-204ENST00000368694 MIER1Q8N108 512 aa27.11■■□□□ 1.93
CHTOP-204ENST00000368694 KDM5AP29375 1690 aaKnown RBP27.1■■□□□ 1.93
CHTOP-204ENST00000368694 SETBP1Q9Y6X0 1596 aa27.1■■□□□ 1.93
CHTOP-204ENST00000368694 UBR1Q8IWV7 1749 aa27.1■■□□□ 1.93
CHTOP-204ENST00000368694 ADAMTSL3P82987 1691 aa27.1■■□□□ 1.93
CHTOP-204ENST00000368694 C14orf93Q9H972 538 aaKnown RBP27.09■■□□□ 1.93
CHTOP-204ENST00000368694 NLRP1Q9C000 1473 aa27.08■■□□□ 1.93
CHTOP-204ENST00000368694 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
CHTOP-204ENST00000368694 POLR3GLQ9BT43 218 aa27.07■■□□□ 1.92
CHTOP-204ENST00000368694 EIF3AQ14152 1382 aaKnown RBP27.06■■□□□ 1.92
CHTOP-204ENST00000368694 SENP3Q9H4L4 574 aaPredicted RBP27.05■■□□□ 1.92
CHTOP-204ENST00000368694 ADGRB1O14514 1584 aa27.03■■□□□ 1.92
CHTOP-204ENST00000368694 MYO3AQ8NEV4 1616 aa27.01■■□□□ 1.91
CHTOP-204ENST00000368694 TMEM132EQ6IEE7 984 aa27.01■■□□□ 1.91
CHTOP-204ENST00000368694 TESK2Q96S53 571 aa27■■□□□ 1.91
CHTOP-204ENST00000368694 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.98■■□□□ 1.91
CHTOP-204ENST00000368694 HDGFP51858 240 aaKnown RBP26.96■■□□□ 1.91
CHTOP-204ENST00000368694 TMEM2Q9UHN6 1383 aa26.96■■□□□ 1.91
CHTOP-204ENST00000368694 ALKQ9UM73 1620 aa26.96■■□□□ 1.91
CHTOP-204ENST00000368694 TMF1P82094 1093 aa26.96■■□□□ 1.91
CHTOP-204ENST00000368694 TRAK1Q9UPV9 953 aa26.96■■□□□ 1.91
CHTOP-204ENST00000368694 DISP3Q9P2K9 1392 aa26.94■■□□□ 1.9
CHTOP-204ENST00000368694 ASXL1Q8IXJ9 1541 aa26.93■■□□□ 1.9
CHTOP-204ENST00000368694 ARHGEF28Q8N1W1 1705 aaKnown RBP26.91■■□□□ 1.9
CHTOP-204ENST00000368694 ANP32CO43423 234 aa26.91■■□□□ 1.9
CHTOP-204ENST00000368694 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
CHTOP-204ENST00000368694 CEP170BQ9Y4F5 1589 aaPredicted RBP26.9■■□□□ 1.9
CHTOP-204ENST00000368694 QRICH2Q9H0J4 1663 aa26.89■■□□□ 1.9
CHTOP-204ENST00000368694 NRXN3Q9Y4C0 1643 aa26.89■■□□□ 1.9
CHTOP-204ENST00000368694 SETD1AO15047 1707 aaKnown RBP26.89■■□□□ 1.89
CHTOP-204ENST00000368694 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.89
CHTOP-204ENST00000368694 THEMISQ8N1K5 641 aaPredicted RBP26.86■■□□□ 1.89
CHTOP-204ENST00000368694 BCANQ96GW7 911 aa26.86■■□□□ 1.89
CHTOP-204ENST00000368694 STK26Q9P289 416 aa26.86■■□□□ 1.89
CHTOP-204ENST00000368694 SLIT1O75093 1534 aa26.86■■□□□ 1.89
CHTOP-204ENST00000368694 PTPRMP28827 1452 aa26.85■■□□□ 1.89
CHTOP-204ENST00000368694 YTHDC2Q9H6S0 1430 aaKnown RBP26.85■■□□□ 1.89
CHTOP-204ENST00000368694 EID1Q9Y6B2 187 aa26.85■■□□□ 1.89
CHTOP-204ENST00000368694 SLC24A1O60721 1099 aa26.84■■□□□ 1.89
CHTOP-204ENST00000368694 ZNF142P52746 1687 aaPredicted RBP26.84■■□□□ 1.89
CHTOP-204ENST00000368694 SETD1BQ9UPS6 1966 aaKnown RBP26.84■■□□□ 1.89
CHTOP-204ENST00000368694 ARHGAP23Q9P227 1491 aa26.83■■□□□ 1.89
CHTOP-204ENST00000368694 CDCA8Q53HL2 280 aa26.83■■□□□ 1.89
CHTOP-204ENST00000368694 TXNDC2Q86VQ3 553 aa26.83■■□□□ 1.89
CHTOP-204ENST00000368694 SBNO2Q9Y2G9 1366 aa26.82■■□□□ 1.88
CHTOP-204ENST00000368694 LTKP29376 864 aa26.82■■□□□ 1.88
CHTOP-204ENST00000368694 PLEKHG1Q9ULL1 1385 aa26.8■■□□□ 1.88
CHTOP-204ENST00000368694 METP08581 1390 aa26.75■■□□□ 1.87
CHTOP-204ENST00000368694 SAFB2Q14151 953 aaKnown RBP eCLIP26.75■■□□□ 1.87
CHTOP-204ENST00000368694 LRPPRCP42704 1394 aaKnown RBP26.74■■□□□ 1.87
CHTOP-204ENST00000368694 ADAMTS13Q76LX8 1427 aa26.73■■□□□ 1.87
CHTOP-204ENST00000368694 POGKQ9P215 609 aa26.73■■□□□ 1.87
CHTOP-204ENST00000368694 MYOM1P52179 1685 aa26.73■■□□□ 1.87
CHTOP-204ENST00000368694 PRAM1Q96QH2 718 aa26.72■■□□□ 1.87
CHTOP-204ENST00000368694 DLC1Q96QB1 1528 aa26.71■■□□□ 1.87
CHTOP-204ENST00000368694 KNDC1Q76NI1 1749 aa26.7■■□□□ 1.86
CHTOP-204ENST00000368694 ABCC11Q96J66 1382 aa26.68■■□□□ 1.86
CHTOP-204ENST00000368694 CNGB1Q14028 1251 aaPredicted RBP26.68■■□□□ 1.86
CHTOP-204ENST00000368694 SLC26A8Q96RN1 970 aa26.68■■□□□ 1.86
CHTOP-204ENST00000368694 PRKRIP1Q9H875 184 aaPredicted RBP26.68■■□□□ 1.86
CHTOP-204ENST00000368694 EVC2Q86UK5 1308 aa26.67■■□□□ 1.86
CHTOP-204ENST00000368694 TULP4Q9NRJ4 1543 aa26.67■■□□□ 1.86
CHTOP-204ENST00000368694 PANK3Q9H999 370 aa26.67■■□□□ 1.86
CHTOP-204ENST00000368694 CCER2I3L3R5 266 aa26.66■■□□□ 1.86
CHTOP-204ENST00000368694 MED14O60244 1454 aa26.65■■□□□ 1.86
CHTOP-204ENST00000368694 DIP2AQ14689 1571 aa26.65■■□□□ 1.86
CHTOP-204ENST00000368694 YTHDC1Q96MU7 727 aaKnown RBP26.65■■□□□ 1.86
CHTOP-204ENST00000368694 MINK1Q8N4C8 1332 aaPredicted RBP26.65■■□□□ 1.86
CHTOP-204ENST00000368694 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.85
CHTOP-204ENST00000368694 CPS1P31327 1500 aa26.63■■□□□ 1.85
CHTOP-204ENST00000368694 WAPLQ7Z5K2 1190 aa26.62■■□□□ 1.85
CHTOP-204ENST00000368694 TECPR2O15040 1411 aa26.61■■□□□ 1.85
CHTOP-204ENST00000368694 PLEKHH1Q9ULM0 1364 aa26.6■■□□□ 1.85
CHTOP-204ENST00000368694 TBX22Q9Y458 520 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms