RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
EBF3-202ENST00000368648 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
EBF3-202ENST00000368648 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
EBF3-202ENST00000368648 TRAK2O60296 914 aa13.5□□□□□ -0.25
EBF3-202ENST00000368648 CCDC9Q9Y3X0 531 aaKnown RBP13.5□□□□□ -0.25
EBF3-202ENST00000368648 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 CNTLNQ9NXG0 1405 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 ADAMTS8Q9UP79 889 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 ZMYND15Q9H091 742 aa13.49□□□□□ -0.25
EBF3-202ENST00000368648 CUL7Q14999 1698 aa13.48□□□□□ -0.25
EBF3-202ENST00000368648 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
EBF3-202ENST00000368648 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
EBF3-202ENST00000368648 PODXL2Q9NZ53 605 aa13.48□□□□□ -0.25
EBF3-202ENST00000368648 NPHP1O15259 732 aa13.48□□□□□ -0.25
EBF3-202ENST00000368648 TARBP1Q13395 1621 aaKnown RBP13.47□□□□□ -0.25
EBF3-202ENST00000368648 BCAR3O75815 825 aa13.47□□□□□ -0.25
EBF3-202ENST00000368648 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
EBF3-202ENST00000368648 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.25
EBF3-202ENST00000368648 EIF3AQ14152 1382 aaKnown RBP13.46□□□□□ -0.25
EBF3-202ENST00000368648 DDX11L8A8MPP1 907 aa13.46□□□□□ -0.25
EBF3-202ENST00000368648 NAP1L2Q9ULW6 460 aaPredicted RBP13.46□□□□□ -0.26
EBF3-202ENST00000368648 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.26
EBF3-202ENST00000368648 TMEM132EQ6IEE7 984 aa13.46□□□□□ -0.26
EBF3-202ENST00000368648 ADAMTS12P58397 1594 aa13.45□□□□□ -0.26
EBF3-202ENST00000368648 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
EBF3-202ENST00000368648 LNPKQ9C0E8 428 aa13.45□□□□□ -0.26
EBF3-202ENST00000368648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
EBF3-202ENST00000368648 KCNJ4P48050 445 aa13.44□□□□□ -0.26
EBF3-202ENST00000368648 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
EBF3-202ENST00000368648 C22orf23Q9BZE7 217 aa13.44□□□□□ -0.26
EBF3-202ENST00000368648 FYCO1Q9BQS8 1478 aa13.44□□□□□ -0.26
EBF3-202ENST00000368648 ZRSR1Q15695 479 aaKnown RBP13.43□□□□□ -0.26
EBF3-202ENST00000368648 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
EBF3-202ENST00000368648 TROQ12816 1431 aaPredicted RBP13.43□□□□□ -0.26
EBF3-202ENST00000368648 NUP160Q12769 1436 aa13.43□□□□□ -0.26
EBF3-202ENST00000368648 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
EBF3-202ENST00000368648 AMPHP49418 695 aa13.42□□□□□ -0.26
EBF3-202ENST00000368648 CHMP3Q9Y3E7 222 aa13.42□□□□□ -0.26
EBF3-202ENST00000368648 CD109Q6YHK3 1445 aa13.42□□□□□ -0.26
EBF3-202ENST00000368648 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
EBF3-202ENST00000368648 MRE11P49959 708 aa13.42□□□□□ -0.26
EBF3-202ENST00000368648 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
EBF3-202ENST00000368648 ESPNB1AK53 854 aa13.41□□□□□ -0.26
EBF3-202ENST00000368648 NASPP49321 788 aaPredicted RBP13.41□□□□□ -0.26
EBF3-202ENST00000368648 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
EBF3-202ENST00000368648 PANK2Q9BZ23 570 aa13.4□□□□□ -0.26
EBF3-202ENST00000368648 FGD1P98174 961 aa13.39□□□□□ -0.27
EBF3-202ENST00000368648 CAVIN1Q6NZI2 390 aaKnown RBP13.39□□□□□ -0.27
EBF3-202ENST00000368648 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
EBF3-202ENST00000368648 CFAP70Q5T0N1 1121 aa13.38□□□□□ -0.27
EBF3-202ENST00000368648 OS9Q13438 667 aaPredicted RBP13.38□□□□□ -0.27
EBF3-202ENST00000368648 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
EBF3-202ENST00000368648 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
EBF3-202ENST00000368648 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
EBF3-202ENST00000368648 TNNT3P45378 269 aaPredicted RBP13.37□□□□□ -0.27
EBF3-202ENST00000368648 ZNF771Q7L3S4 317 aaPredicted RBP13.37□□□□□ -0.27
EBF3-202ENST00000368648 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
EBF3-202ENST00000368648 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
EBF3-202ENST00000368648 ZNF592Q92610 1267 aa13.37□□□□□ -0.27
EBF3-202ENST00000368648 EVC2Q86UK5 1308 aa13.37□□□□□ -0.27
EBF3-202ENST00000368648 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
EBF3-202ENST00000368648 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
EBF3-202ENST00000368648 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
EBF3-202ENST00000368648 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
EBF3-202ENST00000368648 GRPEL1Q9HAV7 217 aa13.36□□□□□ -0.27
EBF3-202ENST00000368648 MCM4P33991 863 aa13.36□□□□□ -0.27
EBF3-202ENST00000368648 PBRM1Q86U86 1689 aa13.36□□□□□ -0.27
EBF3-202ENST00000368648 C9orf84Q5VXU9 1444 aa13.36□□□□□ -0.27
EBF3-202ENST00000368648 E9PSI1 815 aa13.35□□□□□ -0.27
EBF3-202ENST00000368648 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
EBF3-202ENST00000368648 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
EBF3-202ENST00000368648 CEP170Q5SW79 1584 aa13.34□□□□□ -0.27
EBF3-202ENST00000368648 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
EBF3-202ENST00000368648 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
EBF3-202ENST00000368648 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
EBF3-202ENST00000368648 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
EBF3-202ENST00000368648 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
EBF3-202ENST00000368648 RRBP1Q9P2E9 1410 aaKnown RBP13.33□□□□□ -0.28
EBF3-202ENST00000368648 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.33□□□□□ -0.28
EBF3-202ENST00000368648 PSME1Q06323 249 aa13.32□□□□□ -0.28
EBF3-202ENST00000368648 COG3Q96JB2 828 aa13.32□□□□□ -0.28
EBF3-202ENST00000368648 ZHX1Q9UKY1 873 aaPredicted RBP13.32□□□□□ -0.28
EBF3-202ENST00000368648 RRP9O43818 475 aaKnown RBP13.32□□□□□ -0.28
EBF3-202ENST00000368648 SKOR2Q2VWA4 1001 aaPredicted RBP13.32□□□□□ -0.28
EBF3-202ENST00000368648 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
EBF3-202ENST00000368648 CHD1O14646 1710 aa13.31□□□□□ -0.28
EBF3-202ENST00000368648 MCCP23508 829 aa13.31□□□□□ -0.28
EBF3-202ENST00000368648 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
EBF3-202ENST00000368648 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
EBF3-202ENST00000368648 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
EBF3-202ENST00000368648 SYAP1Q96A49 352 aaPredicted RBP13.3□□□□□ -0.28
EBF3-202ENST00000368648 ATP10BO94823 1461 aa13.3□□□□□ -0.28
EBF3-202ENST00000368648 ST18O60284 1047 aa13.3□□□□□ -0.28
EBF3-202ENST00000368648 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
EBF3-202ENST00000368648 PTMSP20962 102 aa13.29□□□□□ -0.28
EBF3-202ENST00000368648 ATF3P18847 181 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms