RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SIGLEC1Q9BZZ2 1709 aa14.59□□□□□ -0.07
TPM3-212ENST00000368533 NOS1P29475 1434 aa14.58□□□□□ -0.07
TPM3-212ENST00000368533 RNF17Q9BXT8 1623 aaKnown RBP14.58□□□□□ -0.08
TPM3-212ENST00000368533 SAFB2Q14151 953 aaKnown RBP eCLIP14.58□□□□□ -0.08
TPM3-212ENST00000368533 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
TPM3-212ENST00000368533 CCER2I3L3R5 266 aa14.57□□□□□ -0.08
TPM3-212ENST00000368533 TRAK1Q9UPV9 953 aa14.57□□□□□ -0.08
TPM3-212ENST00000368533 MROH2AA6NES4 1674 aa14.56□□□□□ -0.08
TPM3-212ENST00000368533 TRPM1Q7Z4N2 1603 aa14.56□□□□□ -0.08
TPM3-212ENST00000368533 CNTLNQ9NXG0 1405 aa14.55□□□□□ -0.08
TPM3-212ENST00000368533 CAMSAP1Q5T5Y3 1602 aa14.55□□□□□ -0.08
TPM3-212ENST00000368533 STK26Q9P289 416 aa14.55□□□□□ -0.08
TPM3-212ENST00000368533 DISP3Q9P2K9 1392 aa14.54□□□□□ -0.08
TPM3-212ENST00000368533 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
TPM3-212ENST00000368533 KIF1BO60333 1816 aa14.53□□□□□ -0.08
TPM3-212ENST00000368533 HNRNPUQ00839 825 aaKnown RBP eCLIP14.52□□□□□ -0.08
TPM3-212ENST00000368533 FAM9BQ8IZU0 186 aa14.52□□□□□ -0.08
TPM3-212ENST00000368533 ZMYM4Q5VZL5 1548 aa14.52□□□□□ -0.08
TPM3-212ENST00000368533 TESK2Q96S53 571 aa14.52□□□□□ -0.08
TPM3-212ENST00000368533 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
TPM3-212ENST00000368533 SYNMO15061 1565 aa14.51□□□□□ -0.09
TPM3-212ENST00000368533 MADDQ8WXG6 1647 aa14.5□□□□□ -0.09
TPM3-212ENST00000368533 PRKRIP1Q9H875 184 aaPredicted RBP14.5□□□□□ -0.09
TPM3-212ENST00000368533 CLTCQ00610 1675 aaKnown RBP14.5□□□□□ -0.09
TPM3-212ENST00000368533 CC2D1BQ5T0F9 858 aaKnown RBP14.49□□□□□ -0.09
TPM3-212ENST00000368533 CCDC136Q96JN2 1154 aa14.49□□□□□ -0.09
TPM3-212ENST00000368533 DEKP35659 375 aaKnown RBP14.49□□□□□ -0.09
TPM3-212ENST00000368533 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
TPM3-212ENST00000368533 MRS2Q9HD23 443 aa14.49□□□□□ -0.09
TPM3-212ENST00000368533 TMF1P82094 1093 aa14.48□□□□□ -0.09
TPM3-212ENST00000368533 GPRASP1Q5JY77 1395 aa14.47□□□□□ -0.09
TPM3-212ENST00000368533 PANK3Q9H999 370 aa14.46□□□□□ -0.09
TPM3-212ENST00000368533 MYO5BQ9ULV0 1848 aa14.46□□□□□ -0.1
TPM3-212ENST00000368533 ZMYM3Q14202 1370 aa14.46□□□□□ -0.1
TPM3-212ENST00000368533 SALL2Q9Y467 1007 aaPredicted RBP14.46□□□□□ -0.1
TPM3-212ENST00000368533 ARHGEF40Q8TER5 1519 aa14.45□□□□□ -0.1
TPM3-212ENST00000368533 SLC52A1Q9NWF4 448 aa14.45□□□□□ -0.1
TPM3-212ENST00000368533 ADGRB3O60242 1522 aa14.45□□□□□ -0.1
TPM3-212ENST00000368533 IRX6P78412 446 aaPredicted RBP14.44□□□□□ -0.1
TPM3-212ENST00000368533 VGFO15240 615 aaPredicted RBP14.44□□□□□ -0.1
TPM3-212ENST00000368533 PREX1Q8TCU6 1659 aa14.43□□□□□ -0.1
TPM3-212ENST00000368533 TMC1Q8TDI8 760 aa14.43□□□□□ -0.1
TPM3-212ENST00000368533 ERVK-7P63135 1459 aa14.42□□□□□ -0.1
TPM3-212ENST00000368533 SCAF11Q99590 1463 aaKnown RBP14.42□□□□□ -0.1
TPM3-212ENST00000368533 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
TPM3-212ENST00000368533 ARHGAP31Q2M1Z3 1444 aa14.41□□□□□ -0.1
TPM3-212ENST00000368533 PIK3C2BO00750 1634 aa14.4□□□□□ -0.1
TPM3-212ENST00000368533 NBR1Q14596 966 aa14.4□□□□□ -0.1
TPM3-212ENST00000368533 PIK3C2GO75747 1445 aa14.39□□□□□ -0.11
TPM3-212ENST00000368533 CENPJQ9HC77 1338 aaPredicted RBP14.39□□□□□ -0.11
TPM3-212ENST00000368533 POLR1AO95602 1720 aaPredicted RBP14.38□□□□□ -0.11
TPM3-212ENST00000368533 ZC3H13Q5T200 1668 aaKnown RBP14.38□□□□□ -0.11
TPM3-212ENST00000368533 MYOM2P54296 1465 aa14.38□□□□□ -0.11
TPM3-212ENST00000368533 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
TPM3-212ENST00000368533 PPLO60437 1756 aa14.38□□□□□ -0.11
TPM3-212ENST00000368533 AGLP35573 1532 aa14.38□□□□□ -0.11
TPM3-212ENST00000368533 NEXMIFQ5QGS0 1516 aa14.37□□□□□ -0.11
TPM3-212ENST00000368533 IFT172Q9UG01 1749 aa14.37□□□□□ -0.11
TPM3-212ENST00000368533 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
TPM3-212ENST00000368533 RPGRIP1LQ68CZ1 1315 aa14.37□□□□□ -0.11
TPM3-212ENST00000368533 EIF3AQ14152 1382 aaKnown RBP14.37□□□□□ -0.11
TPM3-212ENST00000368533 STAC3Q96MF2 364 aa14.36□□□□□ -0.11
TPM3-212ENST00000368533 RTN4Q9NQC3 1192 aaKnown RBP14.36□□□□□ -0.11
TPM3-212ENST00000368533 TNNT2P45379 298 aaPredicted RBP14.36□□□□□ -0.11
TPM3-212ENST00000368533 WAPLQ7Z5K2 1190 aa14.36□□□□□ -0.11
TPM3-212ENST00000368533 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
TPM3-212ENST00000368533 POGKQ9P215 609 aa14.35□□□□□ -0.11
TPM3-212ENST00000368533 IQGAP1P46940 1657 aa14.35□□□□□ -0.11
TPM3-212ENST00000368533 PRAM1Q96QH2 718 aa14.35□□□□□ -0.11
TPM3-212ENST00000368533 TMEM131LA2VDJ0 1609 aa14.34□□□□□ -0.11
TPM3-212ENST00000368533 TNRQ92752 1358 aa14.34□□□□□ -0.11
TPM3-212ENST00000368533 PER1O15534 1290 aaPredicted RBP14.34□□□□□ -0.11
TPM3-212ENST00000368533 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.34□□□□□ -0.11
TPM3-212ENST00000368533 SLC26A8Q96RN1 970 aa14.33□□□□□ -0.11
TPM3-212ENST00000368533 KNSTRNQ9Y448 316 aa14.33□□□□□ -0.11
TPM3-212ENST00000368533 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
TPM3-212ENST00000368533 REREQ9P2R6 1566 aa14.33□□□□□ -0.12
TPM3-212ENST00000368533 SRPK2P78362 688 aaKnown RBP14.32□□□□□ -0.12
TPM3-212ENST00000368533 RIMS2Q9UQ26 1411 aa14.32□□□□□ -0.12
TPM3-212ENST00000368533 NRXN1Q9ULB1 1477 aa14.32□□□□□ -0.12
TPM3-212ENST00000368533 A2ML1A8K2U0 1454 aa14.32□□□□□ -0.12
TPM3-212ENST00000368533 NUTM2FA1L443 756 aa14.32□□□□□ -0.12
TPM3-212ENST00000368533 TXNDC2Q86VQ3 553 aa14.32□□□□□ -0.12
TPM3-212ENST00000368533 LAMC1P11047 1609 aa14.31□□□□□ -0.12
TPM3-212ENST00000368533 KTN1Q86UP2 1357 aaKnown RBP14.3□□□□□ -0.12
TPM3-212ENST00000368533 LTKP29376 864 aa14.3□□□□□ -0.12
TPM3-212ENST00000368533 ADGRB1O14514 1584 aa14.29□□□□□ -0.12
TPM3-212ENST00000368533 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
TPM3-212ENST00000368533 CDCA8Q53HL2 280 aa14.29□□□□□ -0.12
TPM3-212ENST00000368533 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
TPM3-212ENST00000368533 SPATA31D1Q6ZQQ2 1576 aa14.28□□□□□ -0.12
TPM3-212ENST00000368533 PLEKHH1Q9ULM0 1364 aa14.27□□□□□ -0.12
TPM3-212ENST00000368533 NEURL4Q96JN8 1562 aa14.27□□□□□ -0.13
TPM3-212ENST00000368533 IL27Q8NEV9 243 aa14.27□□□□□ -0.13
TPM3-212ENST00000368533 ASXL1Q8IXJ9 1541 aa14.27□□□□□ -0.13
TPM3-212ENST00000368533 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
TPM3-212ENST00000368533 METP08581 1390 aa14.26□□□□□ -0.13
TPM3-212ENST00000368533 RBM33Q96EV2 1170 aaKnown RBP14.26□□□□□ -0.13
TPM3-212ENST00000368533 KIAA1210Q9ULL0 1709 aa14.26□□□□□ -0.13
TPM3-212ENST00000368533 NCKAP5LQ9HCH0 1330 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms