RNA–Protein interactions for RNA: ENST00000367563.7

LINC00272-201, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best) BASIC

Gene LINC00272, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-201ENST00000367563 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
LINC00272-201ENST00000367563 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
LINC00272-201ENST00000367563 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
LINC00272-201ENST00000367563 IDI1Q13907 227 aa13.63□□□□□ -0.23
LINC00272-201ENST00000367563 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
LINC00272-201ENST00000367563 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
LINC00272-201ENST00000367563 ABCC5O15440 1437 aa13.63□□□□□ -0.23
LINC00272-201ENST00000367563 PIK3C2BO00750 1634 aa13.62□□□□□ -0.23
LINC00272-201ENST00000367563 KCNA6P17658 529 aa13.62□□□□□ -0.23
LINC00272-201ENST00000367563 PROSER2Q86WR7 435 aaPredicted RBP13.62□□□□□ -0.23
LINC00272-201ENST00000367563 ERBINQ96RT1 1412 aa13.6□□□□□ -0.23
LINC00272-201ENST00000367563 CFAP65Q6ZU64 1925 aaKnown RBP13.6□□□□□ -0.23
LINC00272-201ENST00000367563 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
LINC00272-201ENST00000367563 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
LINC00272-201ENST00000367563 PTPN23Q9H3S7 1636 aa13.58□□□□□ -0.24
LINC00272-201ENST00000367563 POLA2Q14181 598 aa13.58□□□□□ -0.24
LINC00272-201ENST00000367563 CHIC2Q9UKJ5 165 aa13.58□□□□□ -0.24
LINC00272-201ENST00000367563 TET3O43151 1660 aa13.58□□□□□ -0.24
LINC00272-201ENST00000367563 ROBO1Q9Y6N7 1651 aa13.58□□□□□ -0.24
LINC00272-201ENST00000367563 KANK1Q14678 1352 aa13.57□□□□□ -0.24
LINC00272-201ENST00000367563 DAPK1P53355 1430 aa13.56□□□□□ -0.24
LINC00272-201ENST00000367563 BCANQ96GW7 911 aa13.55□□□□□ -0.24
LINC00272-201ENST00000367563 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
LINC00272-201ENST00000367563 CROCC2H7BZ55 1655 aa13.54□□□□□ -0.24
LINC00272-201ENST00000367563 DSG3P32926 999 aa13.54□□□□□ -0.24
LINC00272-201ENST00000367563 NOS1P29475 1434 aa13.54□□□□□ -0.24
LINC00272-201ENST00000367563 LMTK2Q8IWU2 1503 aa13.54□□□□□ -0.24
LINC00272-201ENST00000367563 MSH6P52701 1360 aa13.53□□□□□ -0.24
LINC00272-201ENST00000367563 ABCB7O75027 752 aa13.52□□□□□ -0.25
LINC00272-201ENST00000367563 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.25
LINC00272-201ENST00000367563 ADGRB3O60242 1522 aa13.52□□□□□ -0.25
LINC00272-201ENST00000367563 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
LINC00272-201ENST00000367563 SETD1AO15047 1707 aaKnown RBP13.52□□□□□ -0.25
LINC00272-201ENST00000367563 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
LINC00272-201ENST00000367563 JCADQ9P266 1359 aa13.51□□□□□ -0.25
LINC00272-201ENST00000367563 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
LINC00272-201ENST00000367563 LRP6O75581 1613 aa13.5□□□□□ -0.25
LINC00272-201ENST00000367563 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
LINC00272-201ENST00000367563 SLC52A1Q9NWF4 448 aa13.49□□□□□ -0.25
LINC00272-201ENST00000367563 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
LINC00272-201ENST00000367563 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
LINC00272-201ENST00000367563 PHLPP1O60346 1717 aa13.47□□□□□ -0.25
LINC00272-201ENST00000367563 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
LINC00272-201ENST00000367563 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
LINC00272-201ENST00000367563 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
LINC00272-201ENST00000367563 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.25
LINC00272-201ENST00000367563 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
LINC00272-201ENST00000367563 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
LINC00272-201ENST00000367563 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
LINC00272-201ENST00000367563 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00272-201ENST00000367563 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
LINC00272-201ENST00000367563 FAM50AQ14320 339 aaKnown RBP13.44□□□□□ -0.26
LINC00272-201ENST00000367563 TBX22Q9Y458 520 aa13.44□□□□□ -0.26
LINC00272-201ENST00000367563 SPATA31A6Q5VVP1 1343 aa13.43□□□□□ -0.26
LINC00272-201ENST00000367563 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
LINC00272-201ENST00000367563 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
LINC00272-201ENST00000367563 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
LINC00272-201ENST00000367563 ANKRD50Q9ULJ7 1429 aa13.41□□□□□ -0.26
LINC00272-201ENST00000367563 NUTM2BA6NNL0 878 aaPredicted RBP13.41□□□□□ -0.26
LINC00272-201ENST00000367563 NUTM2EB1AL46 878 aaPredicted RBP13.41□□□□□ -0.26
LINC00272-201ENST00000367563 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
LINC00272-201ENST00000367563 NUTM2AQ8IVF1 878 aaPredicted RBP13.41□□□□□ -0.26
LINC00272-201ENST00000367563 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
LINC00272-201ENST00000367563 ATF3P18847 181 aa13.4□□□□□ -0.26
LINC00272-201ENST00000367563 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
LINC00272-201ENST00000367563 BRINP3Q76B58 766 aa13.4□□□□□ -0.26
LINC00272-201ENST00000367563 CADPS2Q86UW7 1296 aa13.4□□□□□ -0.26
LINC00272-201ENST00000367563 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
LINC00272-201ENST00000367563 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.26
LINC00272-201ENST00000367563 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
LINC00272-201ENST00000367563 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
LINC00272-201ENST00000367563 PPARGC1BQ86YN6 1023 aaKnown RBP13.39□□□□□ -0.27
LINC00272-201ENST00000367563 GCC2Q8IWJ2 1684 aa13.39□□□□□ -0.27
LINC00272-201ENST00000367563 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
LINC00272-201ENST00000367563 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
LINC00272-201ENST00000367563 RXRBP28702 533 aa13.38□□□□□ -0.27
LINC00272-201ENST00000367563 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC00272-201ENST00000367563 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
LINC00272-201ENST00000367563 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
LINC00272-201ENST00000367563 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.37□□□□□ -0.27
LINC00272-201ENST00000367563 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
LINC00272-201ENST00000367563 AFF2P51816 1311 aa13.36□□□□□ -0.27
LINC00272-201ENST00000367563 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
LINC00272-201ENST00000367563 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
LINC00272-201ENST00000367563 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
LINC00272-201ENST00000367563 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
LINC00272-201ENST00000367563 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
LINC00272-201ENST00000367563 ASXL1Q8IXJ9 1541 aa13.33□□□□□ -0.28
LINC00272-201ENST00000367563 TRPM2O94759 1503 aa13.32□□□□□ -0.28
LINC00272-201ENST00000367563 UNC13BO14795 1591 aa13.32□□□□□ -0.28
LINC00272-201ENST00000367563 MST1RQ04912 1400 aa13.31□□□□□ -0.28
LINC00272-201ENST00000367563 E9PCH4 1651 aa13.31□□□□□ -0.28
LINC00272-201ENST00000367563 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
LINC00272-201ENST00000367563 RGS12O14924 1447 aa13.3□□□□□ -0.28
LINC00272-201ENST00000367563 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
LINC00272-201ENST00000367563 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
LINC00272-201ENST00000367563 METP08581 1390 aa13.3□□□□□ -0.28
LINC00272-201ENST00000367563 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
LINC00272-201ENST00000367563 NUP155O75694 1391 aa13.29□□□□□ -0.28
LINC00272-201ENST00000367563 DCCP43146 1447 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms