RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
PTPN7-202ENST00000367279 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
PTPN7-202ENST00000367279 DAXXQ9UER7 740 aaPredicted RBP16.13■□□□□ 0.17
PTPN7-202ENST00000367279 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
PTPN7-202ENST00000367279 WDR7Q9Y4E6 1490 aa16.12■□□□□ 0.17
PTPN7-202ENST00000367279 ZMYM4Q5VZL5 1548 aa16.12■□□□□ 0.17
PTPN7-202ENST00000367279 SLC4A3P48751 1232 aa16.11■□□□□ 0.17
PTPN7-202ENST00000367279 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
PTPN7-202ENST00000367279 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
PTPN7-202ENST00000367279 EIF3AQ14152 1382 aaKnown RBP16.09■□□□□ 0.17
PTPN7-202ENST00000367279 LAMC1P11047 1609 aa16.09■□□□□ 0.17
PTPN7-202ENST00000367279 SCAPERQ9BY12 1400 aa16.08■□□□□ 0.17
PTPN7-202ENST00000367279 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.16
PTPN7-202ENST00000367279 ATP10AO60312 1499 aa16.08■□□□□ 0.16
PTPN7-202ENST00000367279 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.16
PTPN7-202ENST00000367279 BCAR3O75815 825 aa16.08■□□□□ 0.16
PTPN7-202ENST00000367279 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-202ENST00000367279 ABCC1P33527 1531 aa16.07■□□□□ 0.16
PTPN7-202ENST00000367279 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
PTPN7-202ENST00000367279 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
PTPN7-202ENST00000367279 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-202ENST00000367279 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
PTPN7-202ENST00000367279 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
PTPN7-202ENST00000367279 RRP7AQ9Y3A4 280 aaKnown RBP16.05■□□□□ 0.16
PTPN7-202ENST00000367279 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-202ENST00000367279 NUTM2DQ5VT03 806 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-202ENST00000367279 DDRGK1Q96HY6 314 aa16.04■□□□□ 0.16
PTPN7-202ENST00000367279 SHROOM2Q13796 1616 aa16.04■□□□□ 0.16
PTPN7-202ENST00000367279 GGT6Q6P531 493 aa16.04■□□□□ 0.16
PTPN7-202ENST00000367279 CLTCL1P53675 1640 aa16.03■□□□□ 0.16
PTPN7-202ENST00000367279 RNF17Q9BXT8 1623 aaKnown RBP16.03■□□□□ 0.16
PTPN7-202ENST00000367279 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
PTPN7-202ENST00000367279 CARD14Q9BXL6 1004 aa16.03■□□□□ 0.16
PTPN7-202ENST00000367279 MORC1Q86VD1 984 aa16.02■□□□□ 0.16
PTPN7-202ENST00000367279 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
PTPN7-202ENST00000367279 INSRP06213 1382 aa16.01■□□□□ 0.15
PTPN7-202ENST00000367279 TMEM132EQ6IEE7 984 aa16.01■□□□□ 0.15
PTPN7-202ENST00000367279 TRPM2O94759 1503 aa16.01■□□□□ 0.15
PTPN7-202ENST00000367279 FANCAO15360 1455 aa16.01■□□□□ 0.15
PTPN7-202ENST00000367279 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
PTPN7-202ENST00000367279 STAC3Q96MF2 364 aa16■□□□□ 0.15
PTPN7-202ENST00000367279 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
PTPN7-202ENST00000367279 IQGAP1P46940 1657 aa16■□□□□ 0.15
PTPN7-202ENST00000367279 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
PTPN7-202ENST00000367279 ZNF521Q96K83 1311 aa16■□□□□ 0.15
PTPN7-202ENST00000367279 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
PTPN7-202ENST00000367279 E9PSI1 815 aa15.99■□□□□ 0.15
PTPN7-202ENST00000367279 SLC12A5Q9H2X9 1139 aa15.99■□□□□ 0.15
PTPN7-202ENST00000367279 ZFYVE16Q7Z3T8 1539 aa15.99■□□□□ 0.15
PTPN7-202ENST00000367279 SYNMO15061 1565 aa15.99■□□□□ 0.15
PTPN7-202ENST00000367279 SAFB2Q14151 953 aaKnown RBP eCLIP15.99■□□□□ 0.15
PTPN7-202ENST00000367279 COG6Q9Y2V7 657 aa15.99■□□□□ 0.15
PTPN7-202ENST00000367279 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
PTPN7-202ENST00000367279 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
PTPN7-202ENST00000367279 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
PTPN7-202ENST00000367279 ADGRL1O94910 1474 aa15.97■□□□□ 0.15
PTPN7-202ENST00000367279 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
PTPN7-202ENST00000367279 RTEL1-TNFRSF6BF6WH68 1400 aa15.97■□□□□ 0.15
PTPN7-202ENST00000367279 PTPRTO14522 1441 aa15.97■□□□□ 0.15
PTPN7-202ENST00000367279 CENPJQ9HC77 1338 aaPredicted RBP15.97■□□□□ 0.15
PTPN7-202ENST00000367279 ATP7AQ04656 1500 aa15.97■□□□□ 0.15
PTPN7-202ENST00000367279 CEP152O94986 1710 aa15.96■□□□□ 0.15
PTPN7-202ENST00000367279 KDM5AP29375 1690 aaKnown RBP15.96■□□□□ 0.14
PTPN7-202ENST00000367279 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
PTPN7-202ENST00000367279 RTN4Q9NQC3 1192 aaKnown RBP15.95■□□□□ 0.14
PTPN7-202ENST00000367279 SLC24A1O60721 1099 aa15.94■□□□□ 0.14
PTPN7-202ENST00000367279 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
PTPN7-202ENST00000367279 NOS1P29475 1434 aa15.94■□□□□ 0.14
PTPN7-202ENST00000367279 IGHDP01880 384 aa15.93■□□□□ 0.14
PTPN7-202ENST00000367279 C8orf34Q49A92 452 aa15.93■□□□□ 0.14
PTPN7-202ENST00000367279 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
PTPN7-202ENST00000367279 CLUAP1Q96AJ1 413 aa15.93■□□□□ 0.14
PTPN7-202ENST00000367279 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
PTPN7-202ENST00000367279 TET3O43151 1660 aa15.93■□□□□ 0.14
PTPN7-202ENST00000367279 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
PTPN7-202ENST00000367279 UHRF1BP1LA0JNW5 1464 aa15.92■□□□□ 0.14
PTPN7-202ENST00000367279 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
PTPN7-202ENST00000367279 MYOM1P52179 1685 aa15.91■□□□□ 0.14
PTPN7-202ENST00000367279 MTHFSP49914 203 aa15.91■□□□□ 0.14
PTPN7-202ENST00000367279 TRMT2AQ8IZ69 625 aaKnown RBP15.91■□□□□ 0.14
PTPN7-202ENST00000367279 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
PTPN7-202ENST00000367279 NFKBIBQ15653 356 aa15.9■□□□□ 0.14
PTPN7-202ENST00000367279 STK26Q9P289 416 aa15.9■□□□□ 0.14
PTPN7-202ENST00000367279 USP35Q9P2H5 1018 aa15.9■□□□□ 0.14
PTPN7-202ENST00000367279 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-202ENST00000367279 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTPN7-202ENST00000367279 ABCA6Q8N139 1617 aa15.89■□□□□ 0.13
PTPN7-202ENST00000367279 CFAP53Q96M91 514 aa15.89■□□□□ 0.13
PTPN7-202ENST00000367279 TNNQ9UQP3 1299 aa15.89■□□□□ 0.13
PTPN7-202ENST00000367279 IL27Q8NEV9 243 aa15.88■□□□□ 0.13
PTPN7-202ENST00000367279 RUNDC1Q96C34 613 aa15.88■□□□□ 0.13
PTPN7-202ENST00000367279 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
PTPN7-202ENST00000367279 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
PTPN7-202ENST00000367279 KIF1BO60333 1816 aa15.87■□□□□ 0.13
PTPN7-202ENST00000367279 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
PTPN7-202ENST00000367279 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
PTPN7-202ENST00000367279 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
PTPN7-202ENST00000367279 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
PTPN7-202ENST00000367279 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
PTPN7-202ENST00000367279 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms