RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 TROQ12816 1431 aaPredicted RBP20.5■□□□□ 0.87
SCAF8-201ENST00000367178 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
SCAF8-201ENST00000367178 NEXNQ0ZGT2 675 aa20.5■□□□□ 0.87
SCAF8-201ENST00000367178 MSNP26038 577 aaKnown RBP20.49■□□□□ 0.87
SCAF8-201ENST00000367178 API5Q9BZZ5 524 aaKnown RBP20.49■□□□□ 0.87
SCAF8-201ENST00000367178 DDX19BQ9UMR2 479 aa20.49■□□□□ 0.87
SCAF8-201ENST00000367178 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
SCAF8-201ENST00000367178 ST18O60284 1047 aa20.48■□□□□ 0.87
SCAF8-201ENST00000367178 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
SCAF8-201ENST00000367178 WASHC2AQ641Q2 1341 aa20.48■□□□□ 0.87
SCAF8-201ENST00000367178 RILPL2Q969X0 211 aa20.47■□□□□ 0.87
SCAF8-201ENST00000367178 SYAP1Q96A49 352 aaPredicted RBP20.47■□□□□ 0.87
SCAF8-201ENST00000367178 HFM1A2PYH4 1435 aa20.47■□□□□ 0.87
SCAF8-201ENST00000367178 DZIP1LQ8IYY4 767 aaKnown RBP20.47■□□□□ 0.87
SCAF8-201ENST00000367178 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
SCAF8-201ENST00000367178 HMOX1P09601 288 aa20.47■□□□□ 0.87
SCAF8-201ENST00000367178 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
SCAF8-201ENST00000367178 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
SCAF8-201ENST00000367178 CHAF1AQ13111 956 aaPredicted RBP20.46■□□□□ 0.87
SCAF8-201ENST00000367178 C9orf78Q9NZ63 289 aaPredicted RBP20.46■□□□□ 0.87
SCAF8-201ENST00000367178 G3V3G9 751 aa20.46■□□□□ 0.87
SCAF8-201ENST00000367178 DCAF8Q5TAQ9 597 aa20.46■□□□□ 0.87
SCAF8-201ENST00000367178 NECTIN2Q92692 538 aa20.45■□□□□ 0.86
SCAF8-201ENST00000367178 PDE4AP27815 886 aa20.45■□□□□ 0.86
SCAF8-201ENST00000367178 TOMM22Q9NS69 142 aa20.45■□□□□ 0.86
SCAF8-201ENST00000367178 ATF3P18847 181 aa20.45■□□□□ 0.86
SCAF8-201ENST00000367178 SCAPERQ9BY12 1400 aa20.44■□□□□ 0.86
SCAF8-201ENST00000367178 PLEKHH2Q8IVE3 1493 aa20.44■□□□□ 0.86
SCAF8-201ENST00000367178 GNAI1P63096 354 aa20.44■□□□□ 0.86
SCAF8-201ENST00000367178 NBPF1Q3BBV0 1214 aa20.43■□□□□ 0.86
SCAF8-201ENST00000367178 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
SCAF8-201ENST00000367178 MTHFSP49914 203 aa20.42■□□□□ 0.86
SCAF8-201ENST00000367178 NLRP6P59044 892 aa20.42■□□□□ 0.86
SCAF8-201ENST00000367178 KIF16BQ96L93 1317 aa20.42■□□□□ 0.86
SCAF8-201ENST00000367178 TXNDC2Q86VQ3 553 aa20.42■□□□□ 0.86
SCAF8-201ENST00000367178 KIAA1107Q9UPP5 1409 aa20.42■□□□□ 0.86
SCAF8-201ENST00000367178 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
SCAF8-201ENST00000367178 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
SCAF8-201ENST00000367178 CLSTN1O94985 981 aa20.41■□□□□ 0.86
SCAF8-201ENST00000367178 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
SCAF8-201ENST00000367178 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
SCAF8-201ENST00000367178 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
SCAF8-201ENST00000367178 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
SCAF8-201ENST00000367178 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.86
SCAF8-201ENST00000367178 KIF3AQ9Y496 699 aa20.39■□□□□ 0.86
SCAF8-201ENST00000367178 CCDC34Q96HJ3 373 aa20.39■□□□□ 0.85
SCAF8-201ENST00000367178 CSPP1Q1MSJ5 1256 aa20.38■□□□□ 0.85
SCAF8-201ENST00000367178 SYTL4Q96C24 671 aaPredicted RBP20.38■□□□□ 0.85
SCAF8-201ENST00000367178 PRAM1Q96QH2 718 aa20.37■□□□□ 0.85
SCAF8-201ENST00000367178 DIAPH3Q9NSV4 1193 aa20.37■□□□□ 0.85
SCAF8-201ENST00000367178 NLRP2Q9NX02 1062 aa20.37■□□□□ 0.85
SCAF8-201ENST00000367178 ROCK1Q13464 1354 aa20.37■□□□□ 0.85
SCAF8-201ENST00000367178 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
SCAF8-201ENST00000367178 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
SCAF8-201ENST00000367178 SLC52A1Q9NWF4 448 aa20.36■□□□□ 0.85
SCAF8-201ENST00000367178 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
SCAF8-201ENST00000367178 RAPGEF3O95398 923 aa20.35■□□□□ 0.85
SCAF8-201ENST00000367178 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
SCAF8-201ENST00000367178 KIAA2012Q0VF49 1180 aa20.34■□□□□ 0.85
SCAF8-201ENST00000367178 TCP11L2Q8N4U5 519 aa20.34■□□□□ 0.85
SCAF8-201ENST00000367178 PPP2R1AP30153 589 aa20.34■□□□□ 0.85
SCAF8-201ENST00000367178 GOLGA6L3A6NEY3 463 aa20.33■□□□□ 0.85
SCAF8-201ENST00000367178 IFIT2P09913 472 aaKnown RBP20.33■□□□□ 0.84
SCAF8-201ENST00000367178 LRRFIP1Q32MZ4 808 aaKnown RBP20.32■□□□□ 0.84
SCAF8-201ENST00000367178 FOXD4L5Q5VV16 416 aaPredicted RBP20.32■□□□□ 0.84
SCAF8-201ENST00000367178 FOXD4L4Q8WXT5 416 aaPredicted RBP20.32■□□□□ 0.84
SCAF8-201ENST00000367178 DAPK1P53355 1430 aa20.32■□□□□ 0.84
SCAF8-201ENST00000367178 REC8O95072 547 aa20.32■□□□□ 0.84
SCAF8-201ENST00000367178 RUFY2Q8WXA3 655 aa20.32■□□□□ 0.84
SCAF8-201ENST00000367178 SLC12A5Q9H2X9 1139 aa20.32■□□□□ 0.84
SCAF8-201ENST00000367178 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
SCAF8-201ENST00000367178 RASSF8Q8NHQ8 419 aa20.31■□□□□ 0.84
SCAF8-201ENST00000367178 GPRASP1Q5JY77 1395 aa20.31■□□□□ 0.84
SCAF8-201ENST00000367178 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
SCAF8-201ENST00000367178 TPM4P67936 248 aa20.3■□□□□ 0.84
SCAF8-201ENST00000367178 THEMISQ8N1K5 641 aaPredicted RBP20.3■□□□□ 0.84
SCAF8-201ENST00000367178 G3BP1Q13283 466 aaKnown RBP eCLIP20.3■□□□□ 0.84
SCAF8-201ENST00000367178 SF3A1Q15459 793 aaKnown RBP20.3■□□□□ 0.84
SCAF8-201ENST00000367178 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
SCAF8-201ENST00000367178 MSH5O43196 834 aa20.29■□□□□ 0.84
SCAF8-201ENST00000367178 ESCO1Q5FWF5 840 aa20.29■□□□□ 0.84
SCAF8-201ENST00000367178 PANK1Q8TE04 598 aa20.29■□□□□ 0.84
SCAF8-201ENST00000367178 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
SCAF8-201ENST00000367178 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
SCAF8-201ENST00000367178 PRKAR2BP31323 418 aa20.28■□□□□ 0.84
SCAF8-201ENST00000367178 CHMP4CQ96CF2 233 aa20.28■□□□□ 0.84
SCAF8-201ENST00000367178 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
SCAF8-201ENST00000367178 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.84
SCAF8-201ENST00000367178 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
SCAF8-201ENST00000367178 H3BQV1 296 aa20.27■□□□□ 0.83
SCAF8-201ENST00000367178 IFFO2Q5TF58 517 aa20.27■□□□□ 0.83
SCAF8-201ENST00000367178 LNPKQ9C0E8 428 aa20.27■□□□□ 0.83
SCAF8-201ENST00000367178 AAMPQ13685 434 aa20.26■□□□□ 0.83
SCAF8-201ENST00000367178 HSP90AB4PQ58FF6 505 aa20.26■□□□□ 0.83
SCAF8-201ENST00000367178 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
SCAF8-201ENST00000367178 CDCA7LQ96GN5 454 aa20.26■□□□□ 0.83
SCAF8-201ENST00000367178 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
SCAF8-201ENST00000367178 CDK19Q9BWU1 502 aa20.25■□□□□ 0.83
SCAF8-201ENST00000367178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.25■□□□□ 0.833e-7■□□□□ 9.3
SCAF8-201ENST00000367178 RIC3Q7Z5B4 369 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms