RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	NLRP1	Q9C000	1473 aa		29.89	■■■□□ 2.38
CD55-205	ENST00000367067	NRXN1	Q9ULB1	1477 aa		29.89	■■■□□ 2.38
CD55-205	ENST00000367067	ROCK2	O75116	1388 aa	Known RBP	29.88	■■■□□ 2.37
CD55-205	ENST00000367067	ADGRF5	Q8IZF2	1346 aa		29.88	■■■□□ 2.37
CD55-205	ENST00000367067	KIAA1210	Q9ULL0	1709 aa		29.88	■■■□□ 2.37
CD55-205	ENST00000367067	EIF4G2	P78344	907 aa	Known RBP eCLIP	29.87	■■■□□ 2.37
CD55-205	ENST00000367067	UBR1	Q8IWV7	1749 aa		29.87	■■■□□ 2.37
CD55-205	ENST00000367067	VGF	O15240	615 aa	Predicted RBP	29.85	■■■□□ 2.37
CD55-205	ENST00000367067	CARD11	Q9BXL7	1154 aa		29.85	■■■□□ 2.37
CD55-205	ENST00000367067	PTPRM	P28827	1452 aa		29.84	■■■□□ 2.37
CD55-205	ENST00000367067	LAMC1	P11047	1609 aa		29.84	■■■□□ 2.37
CD55-205	ENST00000367067	GPRASP1	Q5JY77	1395 aa		29.83	■■■□□ 2.37
CD55-205	ENST00000367067	ZFYVE9	O95405	1425 aa		29.83	■■■□□ 2.37
CD55-205	ENST00000367067	HSPA5	P11021	654 aa	Known RBP	29.82	■■■□□ 2.36
CD55-205	ENST00000367067	NBPF1	Q3BBV0	1214 aa		29.82	■■■□□ 2.36
CD55-205	ENST00000367067	MYO3A	Q8NEV4	1616 aa		29.82	■■■□□ 2.36
CD55-205	ENST00000367067	HIRIP3	Q9BW71	556 aa	Predicted RBP	29.82	■■■□□ 2.36
CD55-205	ENST00000367067	PIK3C2G	O75747	1445 aa		29.81	■■■□□ 2.36
CD55-205	ENST00000367067	SETD1B	Q9UPS6	1966 aa	Known RBP	29.79	■■■□□ 2.36
CD55-205	ENST00000367067	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.79	■■■□□ 2.36
CD55-205	ENST00000367067	USP47	Q96K76	1375 aa		29.79	■■■□□ 2.36
CD55-205	ENST00000367067	KDM4F	A0A1W2PPD8	638 aa		29.78	■■■□□ 2.36
CD55-205	ENST00000367067	RIMS2	Q9UQ26	1411 aa		29.77	■■■□□ 2.36
CD55-205	ENST00000367067	CFAP70	Q5T0N1	1121 aa		29.75	■■■□□ 2.35
CD55-205	ENST00000367067	TMEM2	Q9UHN6	1383 aa		29.71	■■■□□ 2.35
CD55-205	ENST00000367067	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.71	■■■□□ 2.35
CD55-205	ENST00000367067	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.71	■■■□□ 2.35
CD55-205	ENST00000367067	C14orf93	Q9H972	538 aa	Known RBP	29.71	■■■□□ 2.35
CD55-205	ENST00000367067	SETBP1	Q9Y6X0	1596 aa		29.7	■■■□□ 2.35
CD55-205	ENST00000367067	IQGAP1	P46940	1657 aa		29.7	■■■□□ 2.35
CD55-205	ENST00000367067	HDGF	P51858	240 aa	Known RBP	29.68	■■■□□ 2.34
CD55-205	ENST00000367067	ZNF142	P52746	1687 aa	Predicted RBP	29.68	■■■□□ 2.34
CD55-205	ENST00000367067	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.65	■■■□□ 2.34
CD55-205	ENST00000367067	SCAF11	Q99590	1463 aa	Known RBP	29.65	■■■□□ 2.34
CD55-205	ENST00000367067	SLIT1	O75093	1534 aa		29.64	■■■□□ 2.34
CD55-205	ENST00000367067	ADGRB1	O14514	1584 aa		29.64	■■■□□ 2.33
CD55-205	ENST00000367067	ST20-MTHFS	A0A0A6YYL1	179 aa		29.62	■■■□□ 2.33
CD55-205	ENST00000367067	ARHGAP23	Q9P227	1491 aa		29.62	■■■□□ 2.33
CD55-205	ENST00000367067	POLR1A	O95602	1720 aa	Predicted RBP	29.62	■■■□□ 2.33
CD55-205	ENST00000367067	ALK	Q9UM73	1620 aa		29.61	■■■□□ 2.33
CD55-205	ENST00000367067	SENP3	Q9H4L4	574 aa	Predicted RBP	29.59	■■■□□ 2.33
CD55-205	ENST00000367067	DIEXF	Q68CQ4	756 aa	Known RBP	29.58	■■■□□ 2.33
CD55-205	ENST00000367067	NRXN3	Q9Y4C0	1643 aa		29.58	■■■□□ 2.33
CD55-205	ENST00000367067	EID1	Q9Y6B2	187 aa		29.57	■■■□□ 2.32
CD55-205	ENST00000367067	EIF3A	Q14152	1382 aa	Known RBP	29.56	■■■□□ 2.32
CD55-205	ENST00000367067	TMEM132E	Q6IEE7	984 aa		29.56	■■■□□ 2.32
CD55-205	ENST00000367067	SETD1A	O15047	1707 aa	Known RBP	29.56	■■■□□ 2.32
CD55-205	ENST00000367067	LTK	P29376	864 aa		29.55	■■■□□ 2.32
CD55-205	ENST00000367067	TXNDC2	Q86VQ3	553 aa		29.55	■■■□□ 2.32
CD55-205	ENST00000367067	ASXL1	Q8IXJ9	1541 aa		29.54	■■■□□ 2.32
CD55-205	ENST00000367067	WASHC2A	Q641Q2	1341 aa		29.53	■■■□□ 2.32
CD55-205	ENST00000367067	C11orf95	C9JLR9	678 aa	Predicted RBP	29.52	■■■□□ 2.32
CD55-205	ENST00000367067	PLEKHG1	Q9ULL1	1385 aa		29.52	■■■□□ 2.32
CD55-205	ENST00000367067	CCDC7	Q96M83	1385 aa		29.5	■■■□□ 2.31
CD55-205	ENST00000367067	BCAN	Q96GW7	911 aa		29.48	■■■□□ 2.31
CD55-205	ENST00000367067	TESK2	Q96S53	571 aa		29.48	■■■□□ 2.31
CD55-205	ENST00000367067	TRAK1	Q9UPV9	953 aa		29.48	■■■□□ 2.31
CD55-205	ENST00000367067	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29.47	■■■□□ 2.31
CD55-205	ENST00000367067	KIF7	Q2M1P5	1343 aa		29.47	■■■□□ 2.31
CD55-205	ENST00000367067	DDX10	Q13206	875 aa	Known RBP	29.45	■■■□□ 2.31
CD55-205	ENST00000367067	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.45	■■■□□ 2.3
CD55-205	ENST00000367067	ADAMTS13	Q76LX8	1427 aa		29.44	■■■□□ 2.3
CD55-205	ENST00000367067	ANKLE2	Q86XL3	938 aa		29.41	■■■□□ 2.3
CD55-205	ENST00000367067	QRICH2	Q9H0J4	1663 aa		29.41	■■■□□ 2.3
CD55-205	ENST00000367067	STK26	Q9P289	416 aa		29.41	■■■□□ 2.3
CD55-205	ENST00000367067	CENPJ	Q9HC77	1338 aa	Predicted RBP	29.4	■■■□□ 2.3
CD55-205	ENST00000367067	MET	P08581	1390 aa		29.4	■■■□□ 2.3
CD55-205	ENST00000367067	MED14	O60244	1454 aa		29.4	■■■□□ 2.3
CD55-205	ENST00000367067	TMF1	P82094	1093 aa		29.39	■■■□□ 2.3
CD55-205	ENST00000367067	LRPPRC	P42704	1394 aa	Known RBP	29.38	■■■□□ 2.29
CD55-205	ENST00000367067	DIP2A	Q14689	1571 aa		29.38	■■■□□ 2.29
CD55-205	ENST00000367067	DISP3	Q9P2K9	1392 aa		29.37	■■■□□ 2.29
CD55-205	ENST00000367067	SBNO2	Q9Y2G9	1366 aa		29.37	■■■□□ 2.29
CD55-205	ENST00000367067	SLC24A1	O60721	1099 aa		29.37	■■■□□ 2.29
CD55-205	ENST00000367067	LMTK3	Q96Q04	1460 aa		29.36	■■■□□ 2.29
CD55-205	ENST00000367067	SLC26A8	Q96RN1	970 aa		29.35	■■■□□ 2.29
CD55-205	ENST00000367067	DLC1	Q96QB1	1528 aa		29.35	■■■□□ 2.29
CD55-205	ENST00000367067	POLR3GL	Q9BT43	218 aa		29.34	■■■□□ 2.29
CD55-205	ENST00000367067	KNDC1	Q76NI1	1749 aa		29.34	■■■□□ 2.29
CD55-205	ENST00000367067	ABCC11	Q96J66	1382 aa		29.34	■■■□□ 2.29
CD55-205	ENST00000367067	TBX22	Q9Y458	520 aa		29.34	■■■□□ 2.29
CD55-205	ENST00000367067	HSPA2	P54652	639 aa		29.29	■■■□□ 2.28
CD55-205	ENST00000367067	CDCA8	Q53HL2	280 aa		29.29	■■■□□ 2.28
CD55-205	ENST00000367067	TECPR2	O15040	1411 aa		29.29	■■■□□ 2.28
CD55-205	ENST00000367067	PRAM1	Q96QH2	718 aa		29.28	■■■□□ 2.28
CD55-205	ENST00000367067	POGK	Q9P215	609 aa		29.27	■■■□□ 2.28
CD55-205	ENST00000367067	CPS1	P31327	1500 aa		29.27	■■■□□ 2.28
CD55-205	ENST00000367067	NCKAP5L	Q9HCH0	1330 aa		29.26	■■■□□ 2.28
CD55-205	ENST00000367067	NPHP4	O75161	1426 aa	Predicted RBP	29.25	■■■□□ 2.27
CD55-205	ENST00000367067	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.24	■■■□□ 2.27
CD55-205	ENST00000367067	PTPRU	Q92729	1446 aa		29.23	■■■□□ 2.27
CD55-205	ENST00000367067	SIRT1	Q96EB6	747 aa		29.22	■■■□□ 2.27
CD55-205	ENST00000367067	FAM135B	Q49AJ0	1406 aa		29.22	■■■□□ 2.27
CD55-205	ENST00000367067	PIK3R4	Q99570	1358 aa		29.22	■■■□□ 2.27
CD55-205	ENST00000367067	WAPL	Q7Z5K2	1190 aa		29.2	■■■□□ 2.26
CD55-205	ENST00000367067	TULP4	Q9NRJ4	1543 aa		29.19	■■■□□ 2.26
CD55-205	ENST00000367067	XRN1	Q8IZH2	1706 aa	Known RBP	29.19	■■■□□ 2.26
CD55-205	ENST00000367067	PLEKHH1	Q9ULM0	1364 aa		29.18	■■■□□ 2.26
CD55-205	ENST00000367067	EVC2	Q86UK5	1308 aa		29.18	■■■□□ 2.26
CD55-205	ENST00000367067	CHD2	O14647	1828 aa	Known RBP	29.18	■■■□□ 2.26

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