RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 RNF17Q9BXT8 1623 aaKnown RBP11.78□□□□□ -0.52
SMYD3-201ENST00000366516 PLB1Q6P1J6 1458 aa11.77□□□□□ -0.52
SMYD3-201ENST00000366516 ZMYM3Q14202 1370 aa11.77□□□□□ -0.52
SMYD3-201ENST00000366516 FBLN2P98095 1184 aa11.77□□□□□ -0.53
SMYD3-201ENST00000366516 GOLGA2Q08379 1002 aa11.77□□□□□ -0.53
SMYD3-201ENST00000366516 C8orf34Q49A92 452 aa11.77□□□□□ -0.53
SMYD3-201ENST00000366516 MAPK8IP3Q9UPT6 1336 aa11.77□□□□□ -0.53
SMYD3-201ENST00000366516 PLIN1O60240 522 aa11.76□□□□□ -0.53
SMYD3-201ENST00000366516 BRPF3Q9ULD4 1205 aa11.76□□□□□ -0.53
SMYD3-201ENST00000366516 MAST1Q9Y2H9 1570 aa11.76□□□□□ -0.53
SMYD3-201ENST00000366516 ATP10AO60312 1499 aa11.76□□□□□ -0.53
SMYD3-201ENST00000366516 PIK3C2GO75747 1445 aa11.76□□□□□ -0.53
SMYD3-201ENST00000366516 SYNMO15061 1565 aa11.76□□□□□ -0.53
SMYD3-201ENST00000366516 AAMPQ13685 434 aa11.76□□□□□ -0.53
SMYD3-201ENST00000366516 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
SMYD3-201ENST00000366516 ABCA8O94911 1581 aa11.75□□□□□ -0.53
SMYD3-201ENST00000366516 ABCC2Q92887 1545 aa11.75□□□□□ -0.53
SMYD3-201ENST00000366516 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
SMYD3-201ENST00000366516 A2MP01023 1474 aa11.75□□□□□ -0.53
SMYD3-201ENST00000366516 NPC1L1Q9UHC9 1359 aa11.75□□□□□ -0.53
SMYD3-201ENST00000366516 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
SMYD3-201ENST00000366516 DUSP27Q5VZP5 1158 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 TESK2Q96S53 571 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 PANK3Q9H999 370 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 IQGAP3Q86VI3 1631 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 MYO5CQ9NQX4 1742 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 DISP3Q9P2K9 1392 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
SMYD3-201ENST00000366516 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
SMYD3-201ENST00000366516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.539e-7■□□□□ 8.5
SMYD3-201ENST00000366516 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
SMYD3-201ENST00000366516 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
SMYD3-201ENST00000366516 KNSTRNQ9Y448 316 aa11.73□□□□□ -0.53
SMYD3-201ENST00000366516 PREX2Q70Z35 1606 aa11.73□□□□□ -0.53
SMYD3-201ENST00000366516 CGNL1Q0VF96 1302 aa11.73□□□□□ -0.53
SMYD3-201ENST00000366516 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
SMYD3-201ENST00000366516 ASXL1Q8IXJ9 1541 aa11.71□□□□□ -0.53
SMYD3-201ENST00000366516 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
SMYD3-201ENST00000366516 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
SMYD3-201ENST00000366516 PLEKHH1Q9ULM0 1364 aa11.7□□□□□ -0.54
SMYD3-201ENST00000366516 E9PSI1 815 aa11.7□□□□□ -0.54
SMYD3-201ENST00000366516 FRAT2O75474 233 aaPredicted RBP11.7□□□□□ -0.54
SMYD3-201ENST00000366516 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
SMYD3-201ENST00000366516 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
SMYD3-201ENST00000366516 C20orf194Q5TEA3 1177 aa11.7□□□□□ -0.54
SMYD3-201ENST00000366516 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
SMYD3-201ENST00000366516 WDR7Q9Y4E6 1490 aa11.69□□□□□ -0.54
SMYD3-201ENST00000366516 PPP2R1AP30153 589 aa11.69□□□□□ -0.54
SMYD3-201ENST00000366516 IQGAP1P46940 1657 aa11.69□□□□□ -0.54
SMYD3-201ENST00000366516 SAMD9LQ8IVG5 1584 aa11.69□□□□□ -0.54
SMYD3-201ENST00000366516 ATP10BO94823 1461 aa11.69□□□□□ -0.54
SMYD3-201ENST00000366516 MAGI2Q86UL8 1455 aa11.69□□□□□ -0.54
SMYD3-201ENST00000366516 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
SMYD3-201ENST00000366516 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
SMYD3-201ENST00000366516 DUOX2Q9NRD8 1548 aa11.67□□□□□ -0.54
SMYD3-201ENST00000366516 EIF5BO60841 1220 aaKnown RBP11.67□□□□□ -0.54
SMYD3-201ENST00000366516 RGS3P49796 1198 aa11.67□□□□□ -0.54
SMYD3-201ENST00000366516 NBPF1Q3BBV0 1214 aa11.67□□□□□ -0.54
SMYD3-201ENST00000366516 GLIPR1L2Q4G1C9 344 aa11.67□□□□□ -0.54
SMYD3-201ENST00000366516 PLA2R1Q13018 1463 aa11.67□□□□□ -0.54
SMYD3-201ENST00000366516 SCAF11Q99590 1463 aaKnown RBP11.65□□□□□ -0.54
SMYD3-201ENST00000366516 PMFBP1Q8TBY8 1022 aa11.65□□□□□ -0.54
SMYD3-201ENST00000366516 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
SMYD3-201ENST00000366516 CDC42BPBQ9Y5S2 1711 aa11.65□□□□□ -0.55
SMYD3-201ENST00000366516 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
SMYD3-201ENST00000366516 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
SMYD3-201ENST00000366516 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
SMYD3-201ENST00000366516 KDM5AP29375 1690 aaKnown RBP11.64□□□□□ -0.55
SMYD3-201ENST00000366516 HNRNPMP52272 730 aaKnown RBP eCLIP11.63□□□□□ -0.551e-6■■■■□ 20.1
SMYD3-201ENST00000366516 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
SMYD3-201ENST00000366516 ISY1Q9ULR0 285 aaKnown RBP11.63□□□□□ -0.55
SMYD3-201ENST00000366516 TTC37Q6PGP7 1564 aa11.63□□□□□ -0.55
SMYD3-201ENST00000366516 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
SMYD3-201ENST00000366516 JPH4Q96JJ6 628 aa11.63□□□□□ -0.55
SMYD3-201ENST00000366516 SYCP2Q9BX26 1530 aa11.63□□□□□ -0.55
SMYD3-201ENST00000366516 KIAA1210Q9ULL0 1709 aa11.63□□□□□ -0.55
SMYD3-201ENST00000366516 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
SMYD3-201ENST00000366516 SPHKAPQ2M3C7 1700 aa11.62□□□□□ -0.55
SMYD3-201ENST00000366516 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
SMYD3-201ENST00000366516 CENPJQ9HC77 1338 aaPredicted RBP11.61□□□□□ -0.55
SMYD3-201ENST00000366516 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
SMYD3-201ENST00000366516 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
SMYD3-201ENST00000366516 MYOM1P52179 1685 aa11.6□□□□□ -0.55
SMYD3-201ENST00000366516 TRPM2O94759 1503 aa11.6□□□□□ -0.55
SMYD3-201ENST00000366516 NLRP1Q9C000 1473 aa11.6□□□□□ -0.55
SMYD3-201ENST00000366516 USP19O94966 1318 aa11.59□□□□□ -0.55
SMYD3-201ENST00000366516 CEP152O94986 1710 aa11.59□□□□□ -0.55
SMYD3-201ENST00000366516 GOLGA6L3A6NEY3 463 aa11.59□□□□□ -0.55
SMYD3-201ENST00000366516 TBC1D32Q96NH3 1257 aa11.58□□□□□ -0.56
SMYD3-201ENST00000366516 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
SMYD3-201ENST00000366516 PTMSP20962 102 aa11.57□□□□□ -0.56
SMYD3-201ENST00000366516 ANTXR1Q9H6X2 564 aa11.57□□□□□ -0.56
SMYD3-201ENST00000366516 POGKQ9P215 609 aa11.57□□□□□ -0.56
SMYD3-201ENST00000366516 SHROOM2Q13796 1616 aa11.56□□□□□ -0.56
SMYD3-201ENST00000366516 APAF1O14727 1248 aa11.56□□□□□ -0.56
SMYD3-201ENST00000366516 RWDD1Q9H446 243 aaPredicted RBP11.56□□□□□ -0.56
SMYD3-201ENST00000366516 DDX11L8A8MPP1 907 aa11.55□□□□□ -0.56
SMYD3-201ENST00000366516 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
SMYD3-201ENST00000366516 BCAR3O75815 825 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms