RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 IRF6O14896 467 aa10.03□□□□□ -0.8
RNU6-553P-201ENST00000364047 PPP4CP60510 307 aa10.03□□□□□ -0.8
RNU6-553P-201ENST00000364047 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
RNU6-553P-201ENST00000364047 ZMYND10O75800 440 aa10.02□□□□□ -0.81
RNU6-553P-201ENST00000364047 BARGINQ6ZT62 677 aa10.01□□□□□ -0.81
RNU6-553P-201ENST00000364047 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
RNU6-553P-201ENST00000364047 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
RNU6-553P-201ENST00000364047 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
RNU6-553P-201ENST00000364047 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
RNU6-553P-201ENST00000364047 PHOX2BQ99453 314 aa10□□□□□ -0.81
RNU6-553P-201ENST00000364047 NECTIN2Q92692 538 aa9.99□□□□□ -0.81
RNU6-553P-201ENST00000364047 DAXXQ9UER7 740 aaPredicted RBP9.96□□□□□ -0.82
RNU6-553P-201ENST00000364047 APLP1P51693 650 aa9.94□□□□□ -0.82
RNU6-553P-201ENST00000364047 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
RNU6-553P-201ENST00000364047 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
RNU6-553P-201ENST00000364047 DDX11L8A8MPP1 907 aa9.92□□□□□ -0.82
RNU6-553P-201ENST00000364047 SLC10A3P09131 477 aa9.92□□□□□ -0.82
RNU6-553P-201ENST00000364047 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
RNU6-553P-201ENST00000364047 CFHP08603 1231 aa9.91□□□□□ -0.82
RNU6-553P-201ENST00000364047 RDH13Q8NBN7 331 aa9.91□□□□□ -0.82
RNU6-553P-201ENST00000364047 PRR14Q9BWN1 585 aa9.91□□□□□ -0.82
RNU6-553P-201ENST00000364047 KMT5BQ4FZB7 885 aa9.9□□□□□ -0.82
RNU6-553P-201ENST00000364047 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
RNU6-553P-201ENST00000364047 AK7Q96M32 723 aa9.89□□□□□ -0.83
RNU6-553P-201ENST00000364047 CLCN1P35523 988 aa9.88□□□□□ -0.83
RNU6-553P-201ENST00000364047 ITGBL1O95965 494 aaPredicted RBP9.87□□□□□ -0.83
RNU6-553P-201ENST00000364047 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
RNU6-553P-201ENST00000364047 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
RNU6-553P-201ENST00000364047 TTLL12Q14166 644 aaPredicted RBP9.86□□□□□ -0.83
RNU6-553P-201ENST00000364047 MTRQ99707 1265 aa9.86□□□□□ -0.83
RNU6-553P-201ENST00000364047 PCDHB3Q9Y5E6 796 aa9.86□□□□□ -0.83
RNU6-553P-201ENST00000364047 TRIM66O15016 1216 aa9.85□□□□□ -0.83
RNU6-553P-201ENST00000364047 ACTN4O43707 911 aaKnown RBP9.85□□□□□ -0.83
RNU6-553P-201ENST00000364047 KCNC4Q03721 635 aa9.85□□□□□ -0.83
RNU6-553P-201ENST00000364047 AMHR2Q16671 573 aa9.85□□□□□ -0.83
RNU6-553P-201ENST00000364047 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
RNU6-553P-201ENST00000364047 COPS2P61201 443 aa9.84□□□□□ -0.83
RNU6-553P-201ENST00000364047 IL21Q9HBE4 155 aa9.84□□□□□ -0.83
RNU6-553P-201ENST00000364047 IFFO2Q5TF58 517 aa9.83□□□□□ -0.84
RNU6-553P-201ENST00000364047 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
RNU6-553P-201ENST00000364047 CD46P15529 392 aa9.82□□□□□ -0.84
RNU6-553P-201ENST00000364047 GCGRP47871 477 aa9.82□□□□□ -0.84
RNU6-553P-201ENST00000364047 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
RNU6-553P-201ENST00000364047 REPIN1Q9BWE0 567 aaKnown RBP9.82□□□□□ -0.84
RNU6-553P-201ENST00000364047 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
RNU6-553P-201ENST00000364047 ZNF516Q92618 1163 aa9.81□□□□□ -0.84
RNU6-553P-201ENST00000364047 GIGYF2Q6Y7W6 1299 aaKnown RBP9.8□□□□□ -0.84
RNU6-553P-201ENST00000364047 FUT2Q10981 343 aa9.79□□□□□ -0.84
RNU6-553P-201ENST00000364047 PARP9Q8IXQ6 854 aa9.79□□□□□ -0.84
RNU6-553P-201ENST00000364047 PUS10Q3MIT2 529 aaKnown RBP9.78□□□□□ -0.84
RNU6-553P-201ENST00000364047 ZPR1O75312 459 aa9.77□□□□□ -0.85
RNU6-553P-201ENST00000364047 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
RNU6-553P-201ENST00000364047 PDE4DQ08499 809 aa9.77□□□□□ -0.85
RNU6-553P-201ENST00000364047 NR1I2O75469 434 aa9.76□□□□□ -0.85
RNU6-553P-201ENST00000364047 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
RNU6-553P-201ENST00000364047 A0A0G2JS52 829 aa9.75□□□□□ -0.85
RNU6-553P-201ENST00000364047 KDM4AO75164 1064 aa9.75□□□□□ -0.85
RNU6-553P-201ENST00000364047 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
RNU6-553P-201ENST00000364047 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
RNU6-553P-201ENST00000364047 TLL1O43897 1013 aa9.73□□□□□ -0.85
RNU6-553P-201ENST00000364047 GRIPAP1Q4V328 841 aa9.73□□□□□ -0.85
RNU6-553P-201ENST00000364047 MORN1Q5T089 497 aa9.73□□□□□ -0.85
RNU6-553P-201ENST00000364047 SCUBE3Q8IX30 993 aa9.73□□□□□ -0.85
RNU6-553P-201ENST00000364047 USP46P62068 366 aa9.72□□□□□ -0.85
RNU6-553P-201ENST00000364047 NUTM1Q86Y26 1132 aa9.72□□□□□ -0.85
RNU6-553P-201ENST00000364047 MS4A1P11836 297 aa9.71□□□□□ -0.86
RNU6-553P-201ENST00000364047 BEGAINQ9BUH8 593 aa9.71□□□□□ -0.86
RNU6-553P-201ENST00000364047 SLC27A5Q9Y2P5 690 aa9.7□□□□□ -0.86
RNU6-553P-201ENST00000364047 HOXA2O43364 376 aa9.69□□□□□ -0.86
RNU6-553P-201ENST00000364047 ADH1BP00325 375 aa9.68□□□□□ -0.86
RNU6-553P-201ENST00000364047 HLA-CQ95604 372 aa9.68□□□□□ -0.86
RNU6-553P-201ENST00000364047 PPP1R18Q6NYC8 613 aa9.67□□□□□ -0.86
RNU6-553P-201ENST00000364047 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
RNU6-553P-201ENST00000364047 FMNL1O95466 1100 aaPredicted RBP9.66□□□□□ -0.86
RNU6-553P-201ENST00000364047 GGCXP38435 758 aa9.66□□□□□ -0.86
RNU6-553P-201ENST00000364047 SPSB2Q99619 263 aa9.66□□□□□ -0.86
RNU6-553P-201ENST00000364047 GUCA2AQ02747 115 aa9.65□□□□□ -0.86
RNU6-553P-201ENST00000364047 Q3C1V9 767 aa9.65□□□□□ -0.86
RNU6-553P-201ENST00000364047 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
RNU6-553P-201ENST00000364047 GPBP1L1Q9HC44 474 aaPredicted RBP9.65□□□□□ -0.86
RNU6-553P-201ENST00000364047 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
RNU6-553P-201ENST00000364047 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
RNU6-553P-201ENST00000364047 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
RNU6-553P-201ENST00000364047 SALL2Q9Y467 1007 aaPredicted RBP9.64□□□□□ -0.87
RNU6-553P-201ENST00000364047 S1PR4O95977 384 aa9.63□□□□□ -0.87
RNU6-553P-201ENST00000364047 DIXDC1Q155Q3 683 aa9.63□□□□□ -0.87
RNU6-553P-201ENST00000364047 BRICD5Q6PL45 260 aa9.63□□□□□ -0.87
RNU6-553P-201ENST00000364047 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
RNU6-553P-201ENST00000364047 KDM4CQ9H3R0 1056 aa9.63□□□□□ -0.87
RNU6-553P-201ENST00000364047 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
RNU6-553P-201ENST00000364047 FDX1P10109 184 aa9.62□□□□□ -0.87
RNU6-553P-201ENST00000364047 RGS20O76081 388 aa9.61□□□□□ -0.87
RNU6-553P-201ENST00000364047 NDUFV2P19404 249 aa9.61□□□□□ -0.87
RNU6-553P-201ENST00000364047 RNF223E7ERA6 249 aa9.6□□□□□ -0.87
RNU6-553P-201ENST00000364047 PRKCSHP14314 528 aaPredicted RBP9.59□□□□□ -0.87
RNU6-553P-201ENST00000364047 NEUROD2Q15784 382 aa9.59□□□□□ -0.87
RNU6-553P-201ENST00000364047 FAM160A2Q8N612 972 aaPredicted RBP9.59□□□□□ -0.87
RNU6-553P-201ENST00000364047 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
RNU6-553P-201ENST00000364047 PPEF1O14829 653 aaPredicted RBP9.58□□□□□ -0.88
RNU6-553P-201ENST00000364047 USB1Q9BQ65 265 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms