RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 RIMS2Q9UQ26 1411 aa9.46□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 LTKP29376 864 aa9.45□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 CEP170BQ9Y4F5 1589 aaPredicted RBP9.45□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 ADGRB3O60242 1522 aa9.44□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 PIK3C2BO00750 1634 aa9.44□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 MYO3AQ8NEV4 1616 aa9.43□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 SPATA31E1Q6ZUB1 1445 aa9.43□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 SENP3Q9H4L4 574 aaPredicted RBP9.43□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 KIF1BO60333 1816 aa9.42□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 TMEM131LA2VDJ0 1609 aa9.42□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 LMTK3Q96Q04 1460 aa9.41□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 ADGRF5Q8IZF2 1346 aa9.41□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 TBX22Q9Y458 520 aa9.41□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 NEURL4Q96JN8 1562 aa9.41□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 SCAF11Q99590 1463 aaKnown RBP9.4□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 ZFYVE9O95405 1425 aa9.4□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 KDM5AP29375 1690 aaKnown RBP9.4□□□□□ -0.9
VTRNA3-1P-201ENST00000362552 SLIT1O75093 1534 aa9.4□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 ARHGAP23Q9P227 1491 aa9.4□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 NPHP4O75161 1426 aaPredicted RBP9.39□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 PLEKHG1Q9ULL1 1385 aa9.39□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 C14orf93Q9H972 538 aaKnown RBP9.39□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 NEXMIFQ5QGS0 1516 aa9.36□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 MYOM2P54296 1465 aa9.36□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 TMEM132EQ6IEE7 984 aa9.36□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 STK26Q9P289 416 aa9.36□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 MED14O60244 1454 aa9.35□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 KCNA6P17658 529 aa9.35□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 NBPF8Q3BBV2 869 aa9.35□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 CARD11Q9BXL7 1154 aa9.35□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 AMOTL2Q9Y2J4 779 aa9.35□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 NBPF1Q3BBV0 1214 aa9.34□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 POGKQ9P215 609 aa9.34□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 PIK3R4Q99570 1358 aa9.34□□□□□ -0.91
VTRNA3-1P-201ENST00000362552 PROSER2Q86WR7 435 aaPredicted RBP9.33□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 MYO5BQ9ULV0 1848 aa9.33□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 PIK3C2GO75747 1445 aa9.32□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 SIRT1Q96EB6 747 aa9.32□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 ADAMTS13Q76LX8 1427 aa9.31□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 METP08581 1390 aa9.31□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 NRXN1Q9ULB1 1477 aa9.31□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 PPLO60437 1756 aa9.31□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 LRPPRCP42704 1394 aaKnown RBP9.3□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 EIF4G2P78344 907 aaKnown RBP eCLIP9.3□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 ALKQ9UM73 1620 aa9.3□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 IQGAP1P46940 1657 aa9.29□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 SETBP1Q9Y6X0 1596 aa9.29□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 EIF3AQ14152 1382 aaKnown RBP9.29□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 ABCC11Q96J66 1382 aa9.29□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 YTHDC2Q9H6S0 1430 aaKnown RBP9.29□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 ZNF335Q9H4Z2 1342 aaPredicted RBP9.29□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 DIP2AQ14689 1571 aa9.29□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 POLR1AO95602 1720 aaPredicted RBP9.28□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 PRAM1Q96QH2 718 aa9.28□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 STRCQ7RTU9 1775 aa9.27□□□□□ -0.92
VTRNA3-1P-201ENST00000362552 SAFB2Q14151 953 aaKnown RBP eCLIP9.27□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 WAPLQ7Z5K2 1190 aa9.27□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 IFT172Q9UG01 1749 aa9.27□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 CENPJQ9HC77 1338 aaPredicted RBP9.27□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 RALGAPBQ86X10 1494 aa9.26□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 GPRASP1Q5JY77 1395 aa9.25□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 LAMC1P11047 1609 aa9.25□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 ST20-MTHFSA0A0A6YYL1 179 aa9.25□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 ATF3P18847 181 aa9.25□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 RBM33Q96EV2 1170 aaKnown RBP9.25□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 C19orf44Q9H6X5 657 aa9.25□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 PTPRUQ92729 1446 aa9.24□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 HSPA5P11021 654 aaKnown RBP9.24□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 TMF1P82094 1093 aa9.24□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 KIAA1210Q9ULL0 1709 aa9.24□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 MINK1Q8N4C8 1332 aaPredicted RBP9.24□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 USP47Q96K76 1375 aa9.24□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 FAM135BQ49AJ0 1406 aa9.23□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 CADPS2Q86UW7 1296 aa9.23□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 MSH6P52701 1360 aa9.23□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 TMEM94Q12767 1356 aa9.23□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 ROBO2Q9HCK4 1378 aa9.23□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 NCOA3Q9Y6Q9 1424 aa9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 CPS1P31327 1500 aa9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 CERKQ8TCT0 537 aa9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 HIRIP3Q9BW71 556 aaPredicted RBP9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 TRPM1Q7Z4N2 1603 aa9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 TECPR2O15040 1411 aa9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 NKTRP30414 1462 aaKnown RBP9.21□□□□□ -0.93
VTRNA3-1P-201ENST00000362552 ADGRB1O14514 1584 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms