RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 NEXMIFQ5QGS0 1516 aa25.55■■□□□ 1.68
CCDC7-203ENST00000362006 ZFYVE9O95405 1425 aa25.55■■□□□ 1.68
CCDC7-203ENST00000362006 NRXN1Q9ULB1 1477 aa25.54■■□□□ 1.68
CCDC7-203ENST00000362006 KIAA1210Q9ULL0 1709 aa25.52■■□□□ 1.68
CCDC7-203ENST00000362006 SETD1BQ9UPS6 1966 aaKnown RBP25.51■■□□□ 1.67
CCDC7-203ENST00000362006 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
CCDC7-203ENST00000362006 UBR1Q8IWV7 1749 aa25.5■■□□□ 1.67
CCDC7-203ENST00000362006 ADGRF5Q8IZF2 1346 aa25.5■■□□□ 1.67
CCDC7-203ENST00000362006 HDGFP51858 240 aaKnown RBP25.5■■□□□ 1.67
CCDC7-203ENST00000362006 PLPPR3Q6T4P5 718 aa25.5■■□□□ 1.67
CCDC7-203ENST00000362006 ROCK2O75116 1388 aaKnown RBP25.5■■□□□ 1.67
CCDC7-203ENST00000362006 GPRASP1Q5JY77 1395 aa25.49■■□□□ 1.67
CCDC7-203ENST00000362006 PTPRMP28827 1452 aa25.49■■□□□ 1.67
CCDC7-203ENST00000362006 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.48■■□□□ 1.67
CCDC7-203ENST00000362006 LAMC1P11047 1609 aa25.48■■□□□ 1.67
CCDC7-203ENST00000362006 CARD11Q9BXL7 1154 aa25.48■■□□□ 1.67
CCDC7-203ENST00000362006 MYO3AQ8NEV4 1616 aa25.47■■□□□ 1.67
CCDC7-203ENST00000362006 PIK3C2GO75747 1445 aa25.46■■□□□ 1.67
CCDC7-203ENST00000362006 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
CCDC7-203ENST00000362006 THEMISQ8N1K5 641 aaPredicted RBP25.43■■□□□ 1.66
CCDC7-203ENST00000362006 NBPF1Q3BBV0 1214 aa25.42■■□□□ 1.66
CCDC7-203ENST00000362006 TMEM2Q9UHN6 1383 aa25.42■■□□□ 1.66
CCDC7-203ENST00000362006 HSPA5P11021 654 aaKnown RBP25.42■■□□□ 1.66
CCDC7-203ENST00000362006 C14orf93Q9H972 538 aaKnown RBP25.42■■□□□ 1.66
CCDC7-203ENST00000362006 CEP170BQ9Y4F5 1589 aaPredicted RBP25.4■■□□□ 1.66
CCDC7-203ENST00000362006 USP47Q96K76 1375 aa25.4■■□□□ 1.66
CCDC7-203ENST00000362006 ZNF142P52746 1687 aaPredicted RBP25.39■■□□□ 1.65
CCDC7-203ENST00000362006 SETBP1Q9Y6X0 1596 aa25.39■■□□□ 1.65
CCDC7-203ENST00000362006 CFAP70Q5T0N1 1121 aa25.39■■□□□ 1.65
CCDC7-203ENST00000362006 NUTM2DQ5VT03 806 aaPredicted RBP25.39■■□□□ 1.65
CCDC7-203ENST00000362006 SLIT1O75093 1534 aa25.37■■□□□ 1.65
CCDC7-203ENST00000362006 ARHGAP23Q9P227 1491 aa25.36■■□□□ 1.65
CCDC7-203ENST00000362006 EID1Q9Y6B2 187 aa25.34■■□□□ 1.65
CCDC7-203ENST00000362006 SCAF11Q99590 1463 aaKnown RBP25.33■■□□□ 1.64
CCDC7-203ENST00000362006 IQGAP1P46940 1657 aa25.32■■□□□ 1.64
CCDC7-203ENST00000362006 KDM4FA0A1W2PPD8 638 aa25.31■■□□□ 1.64
CCDC7-203ENST00000362006 HIRIP3Q9BW71 556 aaPredicted RBP25.31■■□□□ 1.64
CCDC7-203ENST00000362006 TXNDC2Q86VQ3 553 aa25.3■■□□□ 1.64
CCDC7-203ENST00000362006 EIF3AQ14152 1382 aaKnown RBP25.29■■□□□ 1.64
CCDC7-203ENST00000362006 ADGRB1O14514 1584 aa25.29■■□□□ 1.64
CCDC7-203ENST00000362006 ALKQ9UM73 1620 aa25.29■■□□□ 1.64
CCDC7-203ENST00000362006 PLEKHG1Q9ULL1 1385 aa25.28■■□□□ 1.64
CCDC7-203ENST00000362006 ST20-MTHFSA0A0A6YYL1 179 aa25.26■■□□□ 1.63
CCDC7-203ENST00000362006 LTKP29376 864 aa25.25■■□□□ 1.63
CCDC7-203ENST00000362006 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
CCDC7-203ENST00000362006 SLC24A1O60721 1099 aa25.22■■□□□ 1.63
CCDC7-203ENST00000362006 ANKLE2Q86XL3 938 aa25.22■■□□□ 1.63
CCDC7-203ENST00000362006 TMEM132EQ6IEE7 984 aa25.21■■□□□ 1.63
CCDC7-203ENST00000362006 BCANQ96GW7 911 aa25.21■■□□□ 1.63
CCDC7-203ENST00000362006 SETD1AO15047 1707 aaKnown RBP25.21■■□□□ 1.63
CCDC7-203ENST00000362006 POLR1AO95602 1720 aaPredicted RBP25.21■■□□□ 1.63
CCDC7-203ENST00000362006 ASXL1Q8IXJ9 1541 aa25.19■■□□□ 1.62
CCDC7-203ENST00000362006 YTHDC2Q9H6S0 1430 aaKnown RBP25.17■■□□□ 1.62
CCDC7-203ENST00000362006 TRAK1Q9UPV9 953 aa25.16■■□□□ 1.62
CCDC7-203ENST00000362006 ADAMTS13Q76LX8 1427 aa25.16■■□□□ 1.62
CCDC7-203ENST00000362006 DIP2AQ14689 1571 aa25.16■■□□□ 1.62
CCDC7-203ENST00000362006 DIEXFQ68CQ4 756 aaKnown RBP25.15■■□□□ 1.62
CCDC7-203ENST00000362006 TESK2Q96S53 571 aa25.15■■□□□ 1.62
CCDC7-203ENST00000362006 MED14O60244 1454 aa25.15■■□□□ 1.62
CCDC7-203ENST00000362006 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
CCDC7-203ENST00000362006 TBX22Q9Y458 520 aa25.15■■□□□ 1.62
CCDC7-203ENST00000362006 CCDC7Q96M83 1385 aa25.14■■□□□ 1.62
CCDC7-203ENST00000362006 WASHC2AQ641Q2 1341 aa25.14■■□□□ 1.61
CCDC7-203ENST00000362006 LRPPRCP42704 1394 aaKnown RBP25.14■■□□□ 1.61
CCDC7-203ENST00000362006 CENPJQ9HC77 1338 aaPredicted RBP25.13■■□□□ 1.61
CCDC7-203ENST00000362006 TMF1P82094 1093 aa25.12■■□□□ 1.61
CCDC7-203ENST00000362006 SBNO2Q9Y2G9 1366 aa25.12■■□□□ 1.61
CCDC7-203ENST00000362006 ARHGEF28Q8N1W1 1705 aaKnown RBP25.12■■□□□ 1.61
CCDC7-203ENST00000362006 C11orf95C9JLR9 678 aaPredicted RBP25.12■■□□□ 1.61
CCDC7-203ENST00000362006 ABCC11Q96J66 1382 aa25.11■■□□□ 1.61
CCDC7-203ENST00000362006 DLC1Q96QB1 1528 aa25.11■■□□□ 1.61
CCDC7-203ENST00000362006 KIF7Q2M1P5 1343 aa25.1■■□□□ 1.61
CCDC7-203ENST00000362006 METP08581 1390 aa25.1■■□□□ 1.61
CCDC7-203ENST00000362006 STK26Q9P289 416 aa25.09■■□□□ 1.61
CCDC7-203ENST00000362006 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
CCDC7-203ENST00000362006 SIRT1Q96EB6 747 aa25.08■■□□□ 1.61
CCDC7-203ENST00000362006 KNDC1Q76NI1 1749 aa25.07■■□□□ 1.6
CCDC7-203ENST00000362006 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
CCDC7-203ENST00000362006 DDX10Q13206 875 aaKnown RBP25.06■■□□□ 1.6
CCDC7-203ENST00000362006 SLC26A8Q96RN1 970 aa25.06■■□□□ 1.6
CCDC7-203ENST00000362006 QRICH2Q9H0J4 1663 aa25.06■■□□□ 1.6
CCDC7-203ENST00000362006 TECPR2O15040 1411 aa25.05■■□□□ 1.6
CCDC7-203ENST00000362006 NPHP4O75161 1426 aaPredicted RBP25.05■■□□□ 1.6
CCDC7-203ENST00000362006 POGKQ9P215 609 aa25.03■■□□□ 1.6
CCDC7-203ENST00000362006 FAM135BQ49AJ0 1406 aa25.02■■□□□ 1.6
CCDC7-203ENST00000362006 DISP3Q9P2K9 1392 aa25.02■■□□□ 1.6
CCDC7-203ENST00000362006 LMTK3Q96Q04 1460 aa25.01■■□□□ 1.59
CCDC7-203ENST00000362006 CPS1P31327 1500 aa25.01■■□□□ 1.59
CCDC7-203ENST00000362006 PRAM1Q96QH2 718 aa25.01■■□□□ 1.59
CCDC7-203ENST00000362006 NCKAP5LQ9HCH0 1330 aa24.99■■□□□ 1.59
CCDC7-203ENST00000362006 POLR3GLQ9BT43 218 aa24.98■■□□□ 1.59
CCDC7-203ENST00000362006 PUS7Q96PZ0 661 aaKnown RBP24.97■■□□□ 1.59
CCDC7-203ENST00000362006 AMOTL2Q9Y2J4 779 aa24.96■■□□□ 1.59
CCDC7-203ENST00000362006 EVC2Q86UK5 1308 aa24.96■■□□□ 1.59
CCDC7-203ENST00000362006 PTPRUQ92729 1446 aa24.96■■□□□ 1.59
CCDC7-203ENST00000362006 PTCH1Q13635 1447 aa24.94■■□□□ 1.58
CCDC7-203ENST00000362006 CHD2O14647 1828 aaKnown RBP24.93■■□□□ 1.58
CCDC7-203ENST00000362006 XRN1Q8IZH2 1706 aaKnown RBP24.93■■□□□ 1.58
CCDC7-203ENST00000362006 HSPA2P54652 639 aa24.93■■□□□ 1.58
CCDC7-203ENST00000362006 SAFB2Q14151 953 aaKnown RBP eCLIP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 297.7 ms