RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 NEXNQ0ZGT2 675 aa21.3■■□□□ 1
PCGF3-201ENST00000362003 TSHZ2Q9NRE2 1034 aa21.3■■□□□ 1
PCGF3-201ENST00000362003 FAM161AQ3B820 660 aa21.29■■□□□ 1
PCGF3-201ENST00000362003 PLIN1O60240 522 aa21.29■■□□□ 1
PCGF3-201ENST00000362003 RIPK4P57078 832 aa21.29■■□□□ 1
PCGF3-201ENST00000362003 RILPL2Q969X0 211 aa21.29■■□□□ 1
PCGF3-201ENST00000362003 GOLGA6L3A6NEY3 463 aa21.29■■□□□ 1
PCGF3-201ENST00000362003 DDX19BQ9UMR2 479 aa21.29■■□□□ 1
PCGF3-201ENST00000362003 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
PCGF3-201ENST00000362003 TOMM22Q9NS69 142 aa21.28■■□□□ 1
PCGF3-201ENST00000362003 PLEKHH2Q8IVE3 1493 aa21.28■■□□□ 1
PCGF3-201ENST00000362003 EXOC6Q8TAG9 804 aa21.27■■□□□ 1
PCGF3-201ENST00000362003 CHMP4CQ96CF2 233 aa21.27■■□□□ 1
PCGF3-201ENST00000362003 API5Q9BZZ5 524 aaKnown RBP21.27■■□□□ 1
PCGF3-201ENST00000362003 KIF7Q2M1P5 1343 aa21.27■■□□□ 1
PCGF3-201ENST00000362003 PHF14O94880 888 aa21.26■□□□□ 0.99
PCGF3-201ENST00000362003 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
PCGF3-201ENST00000362003 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
PCGF3-201ENST00000362003 COG6Q9Y2V7 657 aa21.24■□□□□ 0.99
PCGF3-201ENST00000362003 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
PCGF3-201ENST00000362003 LRRFIP1Q32MZ4 808 aaKnown RBP21.24■□□□□ 0.99
PCGF3-201ENST00000362003 RASSF8Q8NHQ8 419 aa21.24■□□□□ 0.99
PCGF3-201ENST00000362003 C9orf78Q9NZ63 289 aaPredicted RBP21.23■□□□□ 0.99
PCGF3-201ENST00000362003 NESP48681 1621 aa21.23■□□□□ 0.99
PCGF3-201ENST00000362003 DDX58O95786 925 aaKnown RBP21.23■□□□□ 0.99
PCGF3-201ENST00000362003 DDX11L8A8MPP1 907 aa21.23■□□□□ 0.99
PCGF3-201ENST00000362003 DZIP1LQ8IYY4 767 aaKnown RBP21.22■□□□□ 0.99
PCGF3-201ENST00000362003 GNAI1P63096 354 aa21.21■□□□□ 0.99
PCGF3-201ENST00000362003 DIAPH3Q9NSV4 1193 aa21.21■□□□□ 0.99
PCGF3-201ENST00000362003 DNMBPQ6XZF7 1577 aa21.21■□□□□ 0.99
PCGF3-201ENST00000362003 PDE4AP27815 886 aa21.2■□□□□ 0.98
PCGF3-201ENST00000362003 RUFY2Q8WXA3 655 aa21.2■□□□□ 0.98
PCGF3-201ENST00000362003 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
PCGF3-201ENST00000362003 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
PCGF3-201ENST00000362003 H3BQV1 296 aa21.2■□□□□ 0.98
PCGF3-201ENST00000362003 IFFO2Q5TF58 517 aa21.2■□□□□ 0.98
PCGF3-201ENST00000362003 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
PCGF3-201ENST00000362003 ATF3P18847 181 aa21.19■□□□□ 0.98
PCGF3-201ENST00000362003 CABP2Q9NPB3 220 aa21.18■□□□□ 0.98
PCGF3-201ENST00000362003 HFM1A2PYH4 1435 aa21.18■□□□□ 0.98
PCGF3-201ENST00000362003 SF3A1Q15459 793 aaKnown RBP21.17■□□□□ 0.98
PCGF3-201ENST00000362003 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
PCGF3-201ENST00000362003 BRD4O60885 1362 aaPredicted RBP21.16■□□□□ 0.98
PCGF3-201ENST00000362003 FAM184AQ8NB25 1140 aa21.16■□□□□ 0.98
PCGF3-201ENST00000362003 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
PCGF3-201ENST00000362003 POLA1P09884 1462 aaPredicted RBP21.16■□□□□ 0.98
PCGF3-201ENST00000362003 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
PCGF3-201ENST00000362003 ATP6V1DQ9Y5K8 247 aa21.15■□□□□ 0.98
PCGF3-201ENST00000362003 SCAPERQ9BY12 1400 aa21.15■□□□□ 0.98
PCGF3-201ENST00000362003 REC8O95072 547 aa21.15■□□□□ 0.98
PCGF3-201ENST00000362003 NECTIN2Q92692 538 aa21.15■□□□□ 0.98
PCGF3-201ENST00000362003 NOL10Q9BSC4 688 aaKnown RBP21.14■□□□□ 0.98
PCGF3-201ENST00000362003 MEX3CQ5U5Q3 659 aaKnown RBP21.14■□□□□ 0.97
PCGF3-201ENST00000362003 FKBP5Q13451 457 aaPredicted RBP21.14■□□□□ 0.97
PCGF3-201ENST00000362003 AMOTL1Q8IY63 956 aa21.14■□□□□ 0.97
PCGF3-201ENST00000362003 MARCH6O60337 910 aa21.14■□□□□ 0.97
PCGF3-201ENST00000362003 FOXD4L5Q5VV16 416 aaPredicted RBP21.13■□□□□ 0.97
PCGF3-201ENST00000362003 FOXD4L4Q8WXT5 416 aaPredicted RBP21.13■□□□□ 0.97
PCGF3-201ENST00000362003 SYNE3Q6ZMZ3 975 aa21.13■□□□□ 0.97
PCGF3-201ENST00000362003 AKAP17AQ02040 695 aaKnown RBP21.13■□□□□ 0.97
PCGF3-201ENST00000362003 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
PCGF3-201ENST00000362003 AFAP1Q8N556 730 aa21.13■□□□□ 0.97
PCGF3-201ENST00000362003 RAPGEF4Q8WZA2 1011 aa21.13■□□□□ 0.97
PCGF3-201ENST00000362003 GGNBP2Q9H3C7 697 aa21.13■□□□□ 0.97
PCGF3-201ENST00000362003 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
PCGF3-201ENST00000362003 KIAA1107Q9UPP5 1409 aa21.13■□□□□ 0.97
PCGF3-201ENST00000362003 HMOX1P09601 288 aa21.12■□□□□ 0.97
PCGF3-201ENST00000362003 AAMPQ13685 434 aa21.12■□□□□ 0.97
PCGF3-201ENST00000362003 TMEM132EQ6IEE7 984 aa21.12■□□□□ 0.97
PCGF3-201ENST00000362003 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
PCGF3-201ENST00000362003 SKOR2Q2VWA4 1001 aaPredicted RBP21.1■□□□□ 0.97
PCGF3-201ENST00000362003 HSP90AB4PQ58FF6 505 aa21.1■□□□□ 0.97
PCGF3-201ENST00000362003 VPS53Q5VIR6 699 aa21.1■□□□□ 0.97
PCGF3-201ENST00000362003 ZKSCAN1P17029 563 aaPredicted RBP21.1■□□□□ 0.97
PCGF3-201ENST00000362003 MSH5O43196 834 aa21.09■□□□□ 0.97
PCGF3-201ENST00000362003 ANO2Q9NQ90 1003 aa21.09■□□□□ 0.97
PCGF3-201ENST00000362003 NOC3LQ8WTT2 800 aaKnown RBP21.09■□□□□ 0.97
PCGF3-201ENST00000362003 SYTL4Q96C24 671 aaPredicted RBP21.09■□□□□ 0.97
PCGF3-201ENST00000362003 GPRASP1Q5JY77 1395 aa21.09■□□□□ 0.97
PCGF3-201ENST00000362003 CREBRFQ8IUR6 639 aa21.07■□□□□ 0.96
PCGF3-201ENST00000362003 USP35Q9P2H5 1018 aa21.07■□□□□ 0.96
PCGF3-201ENST00000362003 DAPK1P53355 1430 aa21.06■□□□□ 0.96
PCGF3-201ENST00000362003 WASHC2AQ641Q2 1341 aa21.06■□□□□ 0.96
PCGF3-201ENST00000362003 CFAP70Q5T0N1 1121 aa21.06■□□□□ 0.96
PCGF3-201ENST00000362003 CPLX2Q6PUV4 134 aaKnown RBP21.05■□□□□ 0.96
PCGF3-201ENST00000362003 TRIM34Q9BYJ4 488 aa21.05■□□□□ 0.96
PCGF3-201ENST00000362003 RNF20Q5VTR2 975 aa21.05■□□□□ 0.96
PCGF3-201ENST00000362003 SMG6Q86US8 1419 aaKnown RBP21.05■□□□□ 0.96
PCGF3-201ENST00000362003 INTS3Q68E01 1043 aaKnown RBP21.05■□□□□ 0.96
PCGF3-201ENST00000362003 TRIM29Q14134 588 aa21.04■□□□□ 0.96
PCGF3-201ENST00000362003 ERC2O15083 957 aa21.04■□□□□ 0.96
PCGF3-201ENST00000362003 VPS37DQ86XT2 251 aa21.04■□□□□ 0.96
PCGF3-201ENST00000362003 NLRP6P59044 892 aa21.04■□□□□ 0.96
PCGF3-201ENST00000362003 RIC3Q7Z5B4 369 aa21.03■□□□□ 0.96
PCGF3-201ENST00000362003 NLRP2Q9NX02 1062 aa21.03■□□□□ 0.96
PCGF3-201ENST00000362003 CUL7Q14999 1698 aa21.03■□□□□ 0.96
PCGF3-201ENST00000362003 TPD52L1Q16890 204 aaPredicted RBP21.03■□□□□ 0.96
PCGF3-201ENST00000362003 NUTM2GQ5VZR2 741 aa21.02■□□□□ 0.96
PCGF3-201ENST00000362003 GAS2L2Q8NHY3 880 aa21.02■□□□□ 0.96
PCGF3-201ENST00000362003 PPP2R1AP30153 589 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms