RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
NSMCE1-201ENST00000361439 MED14O60244 1454 aa20.1■□□□□ 0.81
NSMCE1-201ENST00000361439 SCAF11Q99590 1463 aaKnown RBP20.1■□□□□ 0.81
NSMCE1-201ENST00000361439 TXNDC2Q86VQ3 553 aa20.09■□□□□ 0.81
NSMCE1-201ENST00000361439 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
NSMCE1-201ENST00000361439 LTKP29376 864 aa20.07■□□□□ 0.8
NSMCE1-201ENST00000361439 MYO5BQ9ULV0 1848 aa20.06■□□□□ 0.8
NSMCE1-201ENST00000361439 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
NSMCE1-201ENST00000361439 RGL3Q3MIN7 710 aa20.05■□□□□ 0.8
NSMCE1-201ENST00000361439 NEXMIFQ5QGS0 1516 aa20.05■□□□□ 0.8
NSMCE1-201ENST00000361439 NCKAP5LQ9HCH0 1330 aa20.04■□□□□ 0.8
NSMCE1-201ENST00000361439 STRCQ7RTU9 1775 aa20.04■□□□□ 0.8
NSMCE1-201ENST00000361439 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
NSMCE1-201ENST00000361439 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
NSMCE1-201ENST00000361439 POLR1AO95602 1720 aaPredicted RBP20.04■□□□□ 0.8
NSMCE1-201ENST00000361439 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
NSMCE1-201ENST00000361439 SIN3AQ96ST3 1273 aa20.02■□□□□ 0.8
NSMCE1-201ENST00000361439 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
NSMCE1-201ENST00000361439 MYOM2P54296 1465 aa19.99■□□□□ 0.79
NSMCE1-201ENST00000361439 PPLO60437 1756 aa19.99■□□□□ 0.79
NSMCE1-201ENST00000361439 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
NSMCE1-201ENST00000361439 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
NSMCE1-201ENST00000361439 IFT172Q9UG01 1749 aa19.96■□□□□ 0.79
NSMCE1-201ENST00000361439 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
NSMCE1-201ENST00000361439 DCAF11Q8TEB1 546 aa19.96■□□□□ 0.79
NSMCE1-201ENST00000361439 NRXN1Q9ULB1 1477 aa19.96■□□□□ 0.79
NSMCE1-201ENST00000361439 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
NSMCE1-201ENST00000361439 TBX22Q9Y458 520 aa19.95■□□□□ 0.78
NSMCE1-201ENST00000361439 L3MBTL2Q969R5 705 aa19.94■□□□□ 0.78
NSMCE1-201ENST00000361439 DIP2AQ14689 1571 aa19.94■□□□□ 0.78
NSMCE1-201ENST00000361439 TONSLQ96HA7 1378 aa19.94■□□□□ 0.78
NSMCE1-201ENST00000361439 BCANQ96GW7 911 aa19.93■□□□□ 0.78
NSMCE1-201ENST00000361439 ADGRF5Q8IZF2 1346 aa19.93■□□□□ 0.78
NSMCE1-201ENST00000361439 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
NSMCE1-201ENST00000361439 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
NSMCE1-201ENST00000361439 ADAMTS13Q76LX8 1427 aa19.92■□□□□ 0.78
NSMCE1-201ENST00000361439 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
NSMCE1-201ENST00000361439 SLC26A8Q96RN1 970 aa19.88■□□□□ 0.77
NSMCE1-201ENST00000361439 C14orf93Q9H972 538 aaKnown RBP19.88■□□□□ 0.77
NSMCE1-201ENST00000361439 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
NSMCE1-201ENST00000361439 ALKQ9UM73 1620 aa19.86■□□□□ 0.77
NSMCE1-201ENST00000361439 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
NSMCE1-201ENST00000361439 LAMC1P11047 1609 aa19.84■□□□□ 0.77
NSMCE1-201ENST00000361439 KCNA6P17658 529 aa19.83■□□□□ 0.77
NSMCE1-201ENST00000361439 METP08581 1390 aa19.81■□□□□ 0.76
NSMCE1-201ENST00000361439 CFAP70Q5T0N1 1121 aa19.8■□□□□ 0.76
NSMCE1-201ENST00000361439 SETD1AO15047 1707 aaKnown RBP19.79■□□□□ 0.76
NSMCE1-201ENST00000361439 KIAA1210Q9ULL0 1709 aa19.79■□□□□ 0.76
NSMCE1-201ENST00000361439 CPS1P31327 1500 aa19.79■□□□□ 0.76
NSMCE1-201ENST00000361439 NWD1Q149M9 1564 aa19.78■□□□□ 0.76
NSMCE1-201ENST00000361439 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
NSMCE1-201ENST00000361439 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
NSMCE1-201ENST00000361439 NKTRP30414 1462 aaKnown RBP19.78■□□□□ 0.76
NSMCE1-201ENST00000361439 AMOTL2Q9Y2J4 779 aa19.77■□□□□ 0.76
NSMCE1-201ENST00000361439 CHD2O14647 1828 aaKnown RBP19.76■□□□□ 0.75
NSMCE1-201ENST00000361439 LRPPRCP42704 1394 aaKnown RBP19.75■□□□□ 0.75
NSMCE1-201ENST00000361439 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
NSMCE1-201ENST00000361439 LTBP4Q8N2S1 1624 aa19.75■□□□□ 0.75
NSMCE1-201ENST00000361439 TECPR2O15040 1411 aa19.75■□□□□ 0.75
NSMCE1-201ENST00000361439 PTPRUQ92729 1446 aa19.75■□□□□ 0.75
NSMCE1-201ENST00000361439 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
NSMCE1-201ENST00000361439 SIRT1Q96EB6 747 aa19.74■□□□□ 0.75
NSMCE1-201ENST00000361439 PTCH1Q13635 1447 aa19.74■□□□□ 0.75
NSMCE1-201ENST00000361439 YTHDC2Q9H6S0 1430 aaKnown RBP19.74■□□□□ 0.75
NSMCE1-201ENST00000361439 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
NSMCE1-201ENST00000361439 NCOA3Q9Y6Q9 1424 aa19.73■□□□□ 0.75
NSMCE1-201ENST00000361439 ASXL1Q8IXJ9 1541 aa19.72■□□□□ 0.75
NSMCE1-201ENST00000361439 TMEM132EQ6IEE7 984 aa19.72■□□□□ 0.75
NSMCE1-201ENST00000361439 XRN1Q8IZH2 1706 aaKnown RBP19.72■□□□□ 0.75
NSMCE1-201ENST00000361439 GPRASP1Q5JY77 1395 aa19.71■□□□□ 0.75
NSMCE1-201ENST00000361439 TRPM1Q7Z4N2 1603 aa19.71■□□□□ 0.75
NSMCE1-201ENST00000361439 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
NSMCE1-201ENST00000361439 RALGAPBQ86X10 1494 aa19.7■□□□□ 0.74
NSMCE1-201ENST00000361439 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
NSMCE1-201ENST00000361439 NBPF1Q3BBV0 1214 aa19.69■□□□□ 0.74
NSMCE1-201ENST00000361439 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
NSMCE1-201ENST00000361439 STRCP1A6NGW2 1772 aa19.69■□□□□ 0.74
NSMCE1-201ENST00000361439 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
NSMCE1-201ENST00000361439 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
NSMCE1-201ENST00000361439 DLC1Q96QB1 1528 aa19.68■□□□□ 0.74
NSMCE1-201ENST00000361439 KNDC1Q76NI1 1749 aa19.67■□□□□ 0.74
NSMCE1-201ENST00000361439 ROBO2Q9HCK4 1378 aa19.66■□□□□ 0.74
NSMCE1-201ENST00000361439 STK26Q9P289 416 aa19.65■□□□□ 0.74
NSMCE1-201ENST00000361439 TMEM94Q12767 1356 aa19.65■□□□□ 0.74
NSMCE1-201ENST00000361439 CERKQ8TCT0 537 aa19.64■□□□□ 0.73
NSMCE1-201ENST00000361439 CARD11Q9BXL7 1154 aa19.63■□□□□ 0.73
NSMCE1-201ENST00000361439 EIF3AQ14152 1382 aaKnown RBP19.62■□□□□ 0.73
NSMCE1-201ENST00000361439 TRAK1Q9UPV9 953 aa19.62■□□□□ 0.73
NSMCE1-201ENST00000361439 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
NSMCE1-201ENST00000361439 C19orf44Q9H6X5 657 aa19.61■□□□□ 0.73
NSMCE1-201ENST00000361439 POGKQ9P215 609 aa19.6■□□□□ 0.73
NSMCE1-201ENST00000361439 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
NSMCE1-201ENST00000361439 DCCP43146 1447 aa19.59■□□□□ 0.73
NSMCE1-201ENST00000361439 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
NSMCE1-201ENST00000361439 MSH6P52701 1360 aa19.58■□□□□ 0.73
NSMCE1-201ENST00000361439 WAPLQ7Z5K2 1190 aa19.57■□□□□ 0.72
NSMCE1-201ENST00000361439 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
NSMCE1-201ENST00000361439 C14orf37Q86TY3 774 aa19.56■□□□□ 0.72
NSMCE1-201ENST00000361439 CENPJQ9HC77 1338 aaPredicted RBP19.55■□□□□ 0.72
NSMCE1-201ENST00000361439 CADPS2Q86UW7 1296 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms