RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 E9PSI1 815 aa13.23□□□□□ -0.29
LDLRAD4-202ENST00000361303 CLUAP1Q96AJ1 413 aa13.23□□□□□ -0.29
LDLRAD4-202ENST00000361303 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
LDLRAD4-202ENST00000361303 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
LDLRAD4-202ENST00000361303 PES1O00541 588 aaKnown RBP13.23□□□□□ -0.29
LDLRAD4-202ENST00000361303 TRDNQ13061 729 aa13.22□□□□□ -0.29
LDLRAD4-202ENST00000361303 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-202ENST00000361303 PANK3Q9H999 370 aa13.22□□□□□ -0.29
LDLRAD4-202ENST00000361303 ERICH2A1L162 156 aa13.22□□□□□ -0.29
LDLRAD4-202ENST00000361303 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
LDLRAD4-202ENST00000361303 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
LDLRAD4-202ENST00000361303 DIAPH1O60610 1272 aaKnown RBP13.21□□□□□ -0.29
LDLRAD4-202ENST00000361303 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.3
LDLRAD4-202ENST00000361303 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.3
LDLRAD4-202ENST00000361303 MYOM3Q5VTT5 1437 aa13.21□□□□□ -0.3
LDLRAD4-202ENST00000361303 PDE4CQ08493 712 aa13.21□□□□□ -0.3
LDLRAD4-202ENST00000361303 APPP05067 770 aa13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 SF3B2Q13435 895 aaKnown RBP13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 NOL8Q76FK4 1167 aaKnown RBP13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
LDLRAD4-202ENST00000361303 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
LDLRAD4-202ENST00000361303 RNF20Q5VTR2 975 aa13.19□□□□□ -0.3
LDLRAD4-202ENST00000361303 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
LDLRAD4-202ENST00000361303 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
LDLRAD4-202ENST00000361303 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
LDLRAD4-202ENST00000361303 HSP90AB4PQ58FF6 505 aa13.18□□□□□ -0.3
LDLRAD4-202ENST00000361303 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
LDLRAD4-202ENST00000361303 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
LDLRAD4-202ENST00000361303 API5Q9BZZ5 524 aaKnown RBP13.18□□□□□ -0.3
LDLRAD4-202ENST00000361303 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
LDLRAD4-202ENST00000361303 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
LDLRAD4-202ENST00000361303 REC8O95072 547 aa13.17□□□□□ -0.3
LDLRAD4-202ENST00000361303 RRP7AQ9Y3A4 280 aaKnown RBP13.17□□□□□ -0.3
LDLRAD4-202ENST00000361303 ARHGAP5Q13017 1502 aa13.17□□□□□ -0.3
LDLRAD4-202ENST00000361303 CPLX1O14810 134 aa13.17□□□□□ -0.3
LDLRAD4-202ENST00000361303 USP47Q96K76 1375 aa13.16□□□□□ -0.3
LDLRAD4-202ENST00000361303 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
LDLRAD4-202ENST00000361303 GZF1Q9H116 711 aaPredicted RBP13.16□□□□□ -0.3
LDLRAD4-202ENST00000361303 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
LDLRAD4-202ENST00000361303 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
LDLRAD4-202ENST00000361303 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
LDLRAD4-202ENST00000361303 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
LDLRAD4-202ENST00000361303 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
LDLRAD4-202ENST00000361303 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
LDLRAD4-202ENST00000361303 IPO7O95373 1038 aaKnown RBP13.14□□□□□ -0.31
LDLRAD4-202ENST00000361303 NFXL1Q6ZNB6 911 aa13.14□□□□□ -0.31
LDLRAD4-202ENST00000361303 ERC2O15083 957 aa13.14□□□□□ -0.31
LDLRAD4-202ENST00000361303 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD4-202ENST00000361303 BECN2A8MW95 431 aa13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 GNAI1P63096 354 aa13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 R3HCC1Q9Y3T6 440 aaKnown RBP13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 TSPYL4Q9UJ04 414 aa13.13□□□□□ -0.31
LDLRAD4-202ENST00000361303 RIPK4P57078 832 aa13.12□□□□□ -0.31
LDLRAD4-202ENST00000361303 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
LDLRAD4-202ENST00000361303 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
LDLRAD4-202ENST00000361303 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
LDLRAD4-202ENST00000361303 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
LDLRAD4-202ENST00000361303 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
LDLRAD4-202ENST00000361303 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
LDLRAD4-202ENST00000361303 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
LDLRAD4-202ENST00000361303 CCAR1Q8IX12 1150 aaKnown RBP13.1□□□□□ -0.31
LDLRAD4-202ENST00000361303 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
LDLRAD4-202ENST00000361303 XBP1P17861 261 aa13.1□□□□□ -0.31
LDLRAD4-202ENST00000361303 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
LDLRAD4-202ENST00000361303 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
LDLRAD4-202ENST00000361303 RALYLQ86SE5 291 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-202ENST00000361303 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-202ENST00000361303 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
LDLRAD4-202ENST00000361303 SLC3A2P08195 630 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-202ENST00000361303 NINLQ9Y2I6 1382 aa13.09□□□□□ -0.31
LDLRAD4-202ENST00000361303 NECTIN2Q92692 538 aa13.08□□□□□ -0.32
LDLRAD4-202ENST00000361303 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
LDLRAD4-202ENST00000361303 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD4-202ENST00000361303 GRIN2BQ13224 1484 aa13.08□□□□□ -0.32
LDLRAD4-202ENST00000361303 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD4-202ENST00000361303 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
LDLRAD4-202ENST00000361303 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD4-202ENST00000361303 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
LDLRAD4-202ENST00000361303 NLRP6P59044 892 aa13.07□□□□□ -0.32
LDLRAD4-202ENST00000361303 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
LDLRAD4-202ENST00000361303 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
LDLRAD4-202ENST00000361303 BCL2L13Q9BXK5 485 aa13.06□□□□□ -0.32
LDLRAD4-202ENST00000361303 AAMPQ13685 434 aa13.06□□□□□ -0.32
LDLRAD4-202ENST00000361303 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
LDLRAD4-202ENST00000361303 GPS2Q13227 327 aa13.06□□□□□ -0.32
LDLRAD4-202ENST00000361303 SART3Q15020 963 aaKnown RBP13.06□□□□□ -0.32
LDLRAD4-202ENST00000361303 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
LDLRAD4-202ENST00000361303 ESCO1Q5FWF5 840 aa13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 ODF2Q5BJF6 829 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms