RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
TPM2-202ENST00000360958 FOXD1Q16676 465 aa22.05■■□□□ 1.12
TPM2-202ENST00000360958 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
TPM2-202ENST00000360958 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
TPM2-202ENST00000360958 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
TPM2-202ENST00000360958 CHGAP10645 457 aaKnown RBP22.02■■□□□ 1.12
TPM2-202ENST00000360958 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
TPM2-202ENST00000360958 RPGRIP1LQ68CZ1 1315 aa22.01■■□□□ 1.11
TPM2-202ENST00000360958 NEXMIFQ5QGS0 1516 aa22.01■■□□□ 1.11
TPM2-202ENST00000360958 DIP2AQ14689 1571 aa21.97■■□□□ 1.11
TPM2-202ENST00000360958 IQSEC2Q5JU85 1478 aa21.96■■□□□ 1.11
TPM2-202ENST00000360958 ZNF335Q9H4Z2 1342 aaPredicted RBP21.96■■□□□ 1.11
TPM2-202ENST00000360958 CPS1P31327 1500 aa21.96■■□□□ 1.11
TPM2-202ENST00000360958 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.11
TPM2-202ENST00000360958 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
TPM2-202ENST00000360958 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
TPM2-202ENST00000360958 TBX22Q9Y458 520 aa21.93■■□□□ 1.1
TPM2-202ENST00000360958 PPLO60437 1756 aa21.92■■□□□ 1.1
TPM2-202ENST00000360958 ADAMTS13Q76LX8 1427 aa21.92■■□□□ 1.1
TPM2-202ENST00000360958 VGFO15240 615 aaPredicted RBP21.92■■□□□ 1.1
TPM2-202ENST00000360958 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
TPM2-202ENST00000360958 CERKQ8TCT0 537 aa21.91■■□□□ 1.1
TPM2-202ENST00000360958 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
TPM2-202ENST00000360958 NRXN3Q9Y4C0 1643 aa21.9■■□□□ 1.1
TPM2-202ENST00000360958 NWD1Q149M9 1564 aa21.89■■□□□ 1.09
TPM2-202ENST00000360958 SLC26A8Q96RN1 970 aa21.87■■□□□ 1.09
TPM2-202ENST00000360958 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
TPM2-202ENST00000360958 DHX57Q6P158 1386 aaKnown RBP21.86■■□□□ 1.09
TPM2-202ENST00000360958 NKTRP30414 1462 aaKnown RBP21.85■■□□□ 1.09
TPM2-202ENST00000360958 KCNA6P17658 529 aa21.85■■□□□ 1.09
TPM2-202ENST00000360958 NUTM2DQ5VT03 806 aaPredicted RBP21.85■■□□□ 1.09
TPM2-202ENST00000360958 MYOM2P54296 1465 aa21.84■■□□□ 1.09
TPM2-202ENST00000360958 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
TPM2-202ENST00000360958 CHD2O14647 1828 aaKnown RBP21.83■■□□□ 1.09
TPM2-202ENST00000360958 BCANQ96GW7 911 aa21.83■■□□□ 1.09
TPM2-202ENST00000360958 NRXN1Q9ULB1 1477 aa21.83■■□□□ 1.08
TPM2-202ENST00000360958 RGL3Q3MIN7 710 aa21.82■■□□□ 1.08
TPM2-202ENST00000360958 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
TPM2-202ENST00000360958 SETD1AO15047 1707 aaKnown RBP21.8■■□□□ 1.08
TPM2-202ENST00000360958 PIK3C2GO75747 1445 aa21.8■■□□□ 1.08
TPM2-202ENST00000360958 ALKQ9UM73 1620 aa21.79■■□□□ 1.08
TPM2-202ENST00000360958 PRAG1Q86YV5 1406 aa21.79■■□□□ 1.08
TPM2-202ENST00000360958 NCOA3Q9Y6Q9 1424 aa21.77■■□□□ 1.08
TPM2-202ENST00000360958 ADGRF5Q8IZF2 1346 aa21.77■■□□□ 1.07
TPM2-202ENST00000360958 XRN1Q8IZH2 1706 aaKnown RBP21.76■■□□□ 1.07
TPM2-202ENST00000360958 FBXO41Q8TF61 875 aa21.76■■□□□ 1.07
TPM2-202ENST00000360958 METP08581 1390 aa21.75■■□□□ 1.07
TPM2-202ENST00000360958 PTPRUQ92729 1446 aa21.74■■□□□ 1.07
TPM2-202ENST00000360958 LAMC1P11047 1609 aa21.74■■□□□ 1.07
TPM2-202ENST00000360958 XIRP1Q702N8 1843 aaKnown RBP21.72■■□□□ 1.07
TPM2-202ENST00000360958 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
TPM2-202ENST00000360958 AMOTL2Q9Y2J4 779 aa21.7■■□□□ 1.06
TPM2-202ENST00000360958 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
TPM2-202ENST00000360958 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
TPM2-202ENST00000360958 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
TPM2-202ENST00000360958 PTCH1Q13635 1447 aa21.69■■□□□ 1.06
TPM2-202ENST00000360958 PROSER2Q86WR7 435 aaPredicted RBP21.68■■□□□ 1.06
TPM2-202ENST00000360958 DCAF11Q8TEB1 546 aa21.68■■□□□ 1.06
TPM2-202ENST00000360958 TECPR2O15040 1411 aa21.67■■□□□ 1.06
TPM2-202ENST00000360958 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
TPM2-202ENST00000360958 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
TPM2-202ENST00000360958 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
TPM2-202ENST00000360958 ABCC11Q96J66 1382 aa21.63■■□□□ 1.05
TPM2-202ENST00000360958 TOM1O60784 492 aa21.63■■□□□ 1.05
TPM2-202ENST00000360958 SIN3AQ96ST3 1273 aa21.63■■□□□ 1.05
TPM2-202ENST00000360958 KNDC1Q76NI1 1749 aa21.63■■□□□ 1.05
TPM2-202ENST00000360958 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
TPM2-202ENST00000360958 KIAA1210Q9ULL0 1709 aa21.61■■□□□ 1.05
TPM2-202ENST00000360958 DCCP43146 1447 aa21.61■■□□□ 1.05
TPM2-202ENST00000360958 UBAP1LF5GYI3 381 aa21.6■■□□□ 1.05
TPM2-202ENST00000360958 ILDR1Q86SU0 546 aaPredicted RBP21.6■■□□□ 1.05
TPM2-202ENST00000360958 SIRT1Q96EB6 747 aa21.6■■□□□ 1.05
TPM2-202ENST00000360958 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
TPM2-202ENST00000360958 YTHDC2Q9H6S0 1430 aaKnown RBP21.6■■□□□ 1.05
TPM2-202ENST00000360958 MSH6P52701 1360 aa21.6■■□□□ 1.05
TPM2-202ENST00000360958 CFAP70Q5T0N1 1121 aa21.59■■□□□ 1.05
TPM2-202ENST00000360958 L3MBTL2Q969R5 705 aa21.59■■□□□ 1.05
TPM2-202ENST00000360958 FAM135BQ49AJ0 1406 aa21.58■■□□□ 1.05
TPM2-202ENST00000360958 C19orf44Q9H6X5 657 aa21.58■■□□□ 1.05
TPM2-202ENST00000360958 ROBO2Q9HCK4 1378 aa21.58■■□□□ 1.04
TPM2-202ENST00000360958 ADGRL3Q9HAR2 1447 aa21.56■■□□□ 1.04
TPM2-202ENST00000360958 DLC1Q96QB1 1528 aa21.56■■□□□ 1.04
TPM2-202ENST00000360958 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
TPM2-202ENST00000360958 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.55■■□□□ 1.04
TPM2-202ENST00000360958 TMEM132EQ6IEE7 984 aa21.54■■□□□ 1.04
TPM2-202ENST00000360958 CADPS2Q86UW7 1296 aa21.53■■□□□ 1.04
TPM2-202ENST00000360958 RBM33Q96EV2 1170 aaKnown RBP21.53■■□□□ 1.04
TPM2-202ENST00000360958 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.03
TPM2-202ENST00000360958 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
TPM2-202ENST00000360958 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
TPM2-202ENST00000360958 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
TPM2-202ENST00000360958 ATF3P18847 181 aa21.48■■□□□ 1.03
TPM2-202ENST00000360958 STK26Q9P289 416 aa21.48■■□□□ 1.03
TPM2-202ENST00000360958 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
TPM2-202ENST00000360958 SLAIN2Q9P270 581 aa21.47■■□□□ 1.03
TPM2-202ENST00000360958 TRPM1Q7Z4N2 1603 aa21.47■■□□□ 1.03
TPM2-202ENST00000360958 MST1RQ04912 1400 aa21.44■■□□□ 1.02
TPM2-202ENST00000360958 PIP4K2BP78356 416 aa21.43■■□□□ 1.02
TPM2-202ENST00000360958 WAPLQ7Z5K2 1190 aa21.43■■□□□ 1.02
TPM2-202ENST00000360958 PLEKHH1Q9ULM0 1364 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms