RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 L1TD1Q5T7N2 865 aaKnown RBP23.01■■□□□ 1.27
APH1A-202ENST00000360244 RRAGDQ9NQL2 400 aaPredicted RBP23.01■■□□□ 1.27
APH1A-202ENST00000360244 BCAR3O75815 825 aa23■■□□□ 1.27
APH1A-202ENST00000360244 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
APH1A-202ENST00000360244 SPINK5Q9NQ38 1064 aaPredicted RBP22.99■■□□□ 1.27
APH1A-202ENST00000360244 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
APH1A-202ENST00000360244 MAPK8IP3Q9UPT6 1336 aa22.99■■□□□ 1.27
APH1A-202ENST00000360244 SLKQ9H2G2 1235 aaPredicted RBP22.99■■□□□ 1.27
APH1A-202ENST00000360244 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
APH1A-202ENST00000360244 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
APH1A-202ENST00000360244 RNF17Q9BXT8 1623 aaKnown RBP22.98■■□□□ 1.27
APH1A-202ENST00000360244 PIK3C2GO75747 1445 aa22.97■■□□□ 1.27
APH1A-202ENST00000360244 ABCA8O94911 1581 aa22.96■■□□□ 1.27
APH1A-202ENST00000360244 ANTXR1Q9H6X2 564 aa22.96■■□□□ 1.27
APH1A-202ENST00000360244 UNC13BO14795 1591 aa22.96■■□□□ 1.27
APH1A-202ENST00000360244 CCDC146Q8IYE0 955 aa22.96■■□□□ 1.27
APH1A-202ENST00000360244 CGNL1Q0VF96 1302 aa22.95■■□□□ 1.26
APH1A-202ENST00000360244 ABCC2Q92887 1545 aa22.94■■□□□ 1.26
APH1A-202ENST00000360244 ATP10BO94823 1461 aa22.93■■□□□ 1.26
APH1A-202ENST00000360244 CARMIL2Q6F5E8 1435 aa22.93■■□□□ 1.26
APH1A-202ENST00000360244 E9PSI1 815 aa22.93■■□□□ 1.26
APH1A-202ENST00000360244 ASXL1Q8IXJ9 1541 aa22.93■■□□□ 1.26
APH1A-202ENST00000360244 SYNMO15061 1565 aa22.92■■□□□ 1.26
APH1A-202ENST00000360244 APAF1O14727 1248 aa22.92■■□□□ 1.26
APH1A-202ENST00000360244 PDE3AQ14432 1141 aa22.92■■□□□ 1.26
APH1A-202ENST00000360244 CLUAP1Q96AJ1 413 aa22.92■■□□□ 1.26
APH1A-202ENST00000360244 SAMD9LQ8IVG5 1584 aa22.91■■□□□ 1.26
APH1A-202ENST00000360244 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
APH1A-202ENST00000360244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.25
APH1A-202ENST00000360244 IQGAP3Q86VI3 1631 aa22.88■■□□□ 1.25
APH1A-202ENST00000360244 IQGAP1P46940 1657 aa22.87■■□□□ 1.25
APH1A-202ENST00000360244 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
APH1A-202ENST00000360244 ATP10AO60312 1499 aa22.87■■□□□ 1.25
APH1A-202ENST00000360244 NPC1L1Q9UHC9 1359 aa22.86■■□□□ 1.25
APH1A-202ENST00000360244 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
APH1A-202ENST00000360244 TBC1D32Q96NH3 1257 aa22.86■■□□□ 1.25
APH1A-202ENST00000360244 UPF2Q9HAU5 1272 aaKnown RBP22.86■■□□□ 1.25
APH1A-202ENST00000360244 COG6Q9Y2V7 657 aa22.86■■□□□ 1.25
APH1A-202ENST00000360244 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
APH1A-202ENST00000360244 XRCC6P12956 609 aaKnown RBP eCLIP22.85■■□□□ 1.25
APH1A-202ENST00000360244 CDCA8Q53HL2 280 aa22.85■■□□□ 1.25
APH1A-202ENST00000360244 PANK1Q8TE04 598 aa22.85■■□□□ 1.25
APH1A-202ENST00000360244 TBC1D2Q9BYX2 928 aa22.85■■□□□ 1.25
APH1A-202ENST00000360244 CDC42BPBQ9Y5S2 1711 aa22.85■■□□□ 1.25
APH1A-202ENST00000360244 CENPJQ9HC77 1338 aaPredicted RBP22.84■■□□□ 1.25
APH1A-202ENST00000360244 FSD2A1L4K1 749 aa22.84■■□□□ 1.25
APH1A-202ENST00000360244 GOLGA6L3A6NEY3 463 aa22.84■■□□□ 1.25
APH1A-202ENST00000360244 CANXP27824 592 aaKnown RBP22.84■■□□□ 1.25
APH1A-202ENST00000360244 PREX2Q70Z35 1606 aa22.83■■□□□ 1.25
APH1A-202ENST00000360244 MYOM1P52179 1685 aa22.83■■□□□ 1.24
APH1A-202ENST00000360244 JPH4Q96JJ6 628 aa22.83■■□□□ 1.24
APH1A-202ENST00000360244 ZMYM3Q14202 1370 aa22.82■■□□□ 1.24
APH1A-202ENST00000360244 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
APH1A-202ENST00000360244 MAST1Q9Y2H9 1570 aa22.82■■□□□ 1.24
APH1A-202ENST00000360244 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
APH1A-202ENST00000360244 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
APH1A-202ENST00000360244 ARXQ96QS3 562 aa22.81■■□□□ 1.24
APH1A-202ENST00000360244 PMFBP1Q8TBY8 1022 aa22.79■■□□□ 1.24
APH1A-202ENST00000360244 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
APH1A-202ENST00000360244 MCM4P33991 863 aa22.78■■□□□ 1.24
APH1A-202ENST00000360244 CLCN1P35523 988 aa22.78■■□□□ 1.24
APH1A-202ENST00000360244 PNNQ9H307 717 aaKnown RBP22.78■■□□□ 1.24
APH1A-202ENST00000360244 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
APH1A-202ENST00000360244 PANK2Q9BZ23 570 aa22.77■■□□□ 1.24
APH1A-202ENST00000360244 AAMPQ13685 434 aa22.76■■□□□ 1.23
APH1A-202ENST00000360244 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
APH1A-202ENST00000360244 GLIPR1L2Q4G1C9 344 aa22.75■■□□□ 1.23
APH1A-202ENST00000360244 WWC1Q8IX03 1113 aa22.75■■□□□ 1.23
APH1A-202ENST00000360244 PCDHB15Q9Y5E8 787 aa22.75■■□□□ 1.23
APH1A-202ENST00000360244 GZF1Q9H116 711 aaPredicted RBP22.74■■□□□ 1.23
APH1A-202ENST00000360244 PDZRN3Q9UPQ7 1066 aa22.74■■□□□ 1.23
APH1A-202ENST00000360244 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
APH1A-202ENST00000360244 SPRYD3Q8NCJ5 442 aa22.72■■□□□ 1.23
APH1A-202ENST00000360244 KDM5AP29375 1690 aaKnown RBP22.71■■□□□ 1.23
APH1A-202ENST00000360244 RARSP54136 660 aaKnown RBP22.7■■□□□ 1.22
APH1A-202ENST00000360244 FBLN2P98095 1184 aa22.7■■□□□ 1.22
APH1A-202ENST00000360244 TRAK2O60296 914 aa22.7■■□□□ 1.22
APH1A-202ENST00000360244 CHMP5Q9NZZ3 219 aa22.69■■□□□ 1.22
APH1A-202ENST00000360244 SPHKAPQ2M3C7 1700 aa22.69■■□□□ 1.22
APH1A-202ENST00000360244 DUOX2Q9NRD8 1548 aa22.69■■□□□ 1.22
APH1A-202ENST00000360244 RLBP1P12271 317 aa22.69■■□□□ 1.22
APH1A-202ENST00000360244 MRE11P49959 708 aa22.69■■□□□ 1.22
APH1A-202ENST00000360244 PKNOX2Q96KN3 472 aa22.67■■□□□ 1.22
APH1A-202ENST00000360244 RWDD1Q9H446 243 aaPredicted RBP22.67■■□□□ 1.22
APH1A-202ENST00000360244 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
APH1A-202ENST00000360244 CEP152O94986 1710 aa22.67■■□□□ 1.22
APH1A-202ENST00000360244 RTEL1-TNFRSF6BF6WH68 1400 aa22.67■■□□□ 1.22
APH1A-202ENST00000360244 HSP90AA1P07900 732 aaKnown RBP22.66■■□□□ 1.22
APH1A-202ENST00000360244 TNNQ9UQP3 1299 aa22.66■■□□□ 1.22
APH1A-202ENST00000360244 TTC37Q6PGP7 1564 aa22.66■■□□□ 1.22
APH1A-202ENST00000360244 POLR3AO14802 1390 aaPredicted RBP22.65■■□□□ 1.22
APH1A-202ENST00000360244 RRP9O43818 475 aaKnown RBP22.64■■□□□ 1.22
APH1A-202ENST00000360244 HSP90AA2PQ14568 343 aaPredicted RBP22.64■■□□□ 1.22
APH1A-202ENST00000360244 C22orf23Q9BZE7 217 aa22.64■■□□□ 1.22
APH1A-202ENST00000360244 CARD14Q9BXL6 1004 aa22.63■■□□□ 1.21
APH1A-202ENST00000360244 STAC3Q96MF2 364 aa22.62■■□□□ 1.21
APH1A-202ENST00000360244 GRPEL1Q9HAV7 217 aa22.62■■□□□ 1.21
APH1A-202ENST00000360244 MYH16Q9H6N6 1097 aa22.61■■□□□ 1.21
APH1A-202ENST00000360244 DDX11L8A8MPP1 907 aa22.61■■□□□ 1.21
APH1A-202ENST00000360244 NEUROD2Q15784 382 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms