RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 DISP3Q9P2K9 1392 aa24.96■■□□□ 1.59
PDLIM7-203ENST00000359895 FAM9BQ8IZU0 186 aa24.96■■□□□ 1.59
PDLIM7-203ENST00000359895 PPLO60437 1756 aa24.95■■□□□ 1.58
PDLIM7-203ENST00000359895 EIF3AQ14152 1382 aaKnown RBP24.95■■□□□ 1.58
PDLIM7-203ENST00000359895 WASHC2CQ9Y4E1 1318 aa24.94■■□□□ 1.58
PDLIM7-203ENST00000359895 NRXN1Q9ULB1 1477 aa24.94■■□□□ 1.58
PDLIM7-203ENST00000359895 NEFLP07196 543 aa24.92■■□□□ 1.58
PDLIM7-203ENST00000359895 PIK3C2BO00750 1634 aa24.9■■□□□ 1.58
PDLIM7-203ENST00000359895 ZBED9Q6R2W3 1325 aa24.9■■□□□ 1.58
PDLIM7-203ENST00000359895 MYBBP1AQ9BQG0 1328 aaKnown RBP24.9■■□□□ 1.58
PDLIM7-203ENST00000359895 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
PDLIM7-203ENST00000359895 ARHGAP31Q2M1Z3 1444 aa24.9■■□□□ 1.58
PDLIM7-203ENST00000359895 CDCA8Q53HL2 280 aa24.9■■□□□ 1.58
PDLIM7-203ENST00000359895 BRD4O60885 1362 aaPredicted RBP24.9■■□□□ 1.58
PDLIM7-203ENST00000359895 NOS1P29475 1434 aa24.89■■□□□ 1.58
PDLIM7-203ENST00000359895 SLC24A1O60721 1099 aa24.89■■□□□ 1.58
PDLIM7-203ENST00000359895 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
PDLIM7-203ENST00000359895 YEATS2Q9ULM3 1422 aa24.87■■□□□ 1.57
PDLIM7-203ENST00000359895 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
PDLIM7-203ENST00000359895 PARD3Q8TEW0 1356 aa24.86■■□□□ 1.57
PDLIM7-203ENST00000359895 SYNMO15061 1565 aa24.86■■□□□ 1.57
PDLIM7-203ENST00000359895 MYO3AQ8NEV4 1616 aa24.85■■□□□ 1.57
PDLIM7-203ENST00000359895 PER1O15534 1290 aaPredicted RBP24.85■■□□□ 1.57
PDLIM7-203ENST00000359895 TMC1Q8TDI8 760 aa24.85■■□□□ 1.57
PDLIM7-203ENST00000359895 KDM5AP29375 1690 aaKnown RBP24.85■■□□□ 1.57
PDLIM7-203ENST00000359895 PELP1Q8IZL8 1130 aaKnown RBP24.84■■□□□ 1.57
PDLIM7-203ENST00000359895 REREQ9P2R6 1566 aa24.84■■□□□ 1.57
PDLIM7-203ENST00000359895 ADGRF5Q8IZF2 1346 aa24.84■■□□□ 1.57
PDLIM7-203ENST00000359895 CNGB1Q14028 1251 aaPredicted RBP24.82■■□□□ 1.56
PDLIM7-203ENST00000359895 FKBP8Q14318 412 aa24.82■■□□□ 1.56
PDLIM7-203ENST00000359895 CFAP70Q5T0N1 1121 aa24.8■■□□□ 1.56
PDLIM7-203ENST00000359895 PNISRQ8TF01 805 aaKnown RBP24.8■■□□□ 1.56
PDLIM7-203ENST00000359895 PREX1Q8TCU6 1659 aa24.8■■□□□ 1.56
PDLIM7-203ENST00000359895 CHGAP10645 457 aaKnown RBP24.8■■□□□ 1.56
PDLIM7-203ENST00000359895 PANK3Q9H999 370 aa24.8■■□□□ 1.56
PDLIM7-203ENST00000359895 MYOM1P52179 1685 aa24.79■■□□□ 1.56
PDLIM7-203ENST00000359895 NLRP13Q86W25 1043 aa24.79■■□□□ 1.56
PDLIM7-203ENST00000359895 PIK3C2GO75747 1445 aa24.79■■□□□ 1.56
PDLIM7-203ENST00000359895 AGLP35573 1532 aa24.77■■□□□ 1.56
PDLIM7-203ENST00000359895 LRPPRCP42704 1394 aaKnown RBP24.77■■□□□ 1.56
PDLIM7-203ENST00000359895 SBNO2Q9Y2G9 1366 aa24.75■■□□□ 1.55
PDLIM7-203ENST00000359895 NEXMIFQ5QGS0 1516 aa24.74■■□□□ 1.55
PDLIM7-203ENST00000359895 ARHGEF40Q8TER5 1519 aa24.72■■□□□ 1.55
PDLIM7-203ENST00000359895 C14orf93Q9H972 538 aaKnown RBP24.72■■□□□ 1.55
PDLIM7-203ENST00000359895 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
PDLIM7-203ENST00000359895 PPP6R1Q9UPN7 881 aa24.71■■□□□ 1.55
PDLIM7-203ENST00000359895 AEBP2Q6ZN18 517 aaPredicted RBP24.71■■□□□ 1.55
PDLIM7-203ENST00000359895 ERVK-7P63135 1459 aa24.7■■□□□ 1.54
PDLIM7-203ENST00000359895 ADGRB1O14514 1584 aa24.7■■□□□ 1.54
PDLIM7-203ENST00000359895 MYO5BQ9ULV0 1848 aa24.7■■□□□ 1.54
PDLIM7-203ENST00000359895 QRICH2Q9H0J4 1663 aa24.69■■□□□ 1.54
PDLIM7-203ENST00000359895 VGFO15240 615 aaPredicted RBP24.68■■□□□ 1.54
PDLIM7-203ENST00000359895 KNSTRNQ9Y448 316 aa24.68■■□□□ 1.54
PDLIM7-203ENST00000359895 ZFYVE9O95405 1425 aa24.68■■□□□ 1.54
PDLIM7-203ENST00000359895 INSRP06213 1382 aa24.67■■□□□ 1.54
PDLIM7-203ENST00000359895 SMG6Q86US8 1419 aaKnown RBP24.67■■□□□ 1.54
PDLIM7-203ENST00000359895 ASXL1Q8IXJ9 1541 aa24.67■■□□□ 1.54
PDLIM7-203ENST00000359895 TMEM131LA2VDJ0 1609 aa24.67■■□□□ 1.54
PDLIM7-203ENST00000359895 NPC1L1Q9UHC9 1359 aa24.66■■□□□ 1.54
PDLIM7-203ENST00000359895 CC2D1BQ5T0F9 858 aaKnown RBP24.66■■□□□ 1.54
PDLIM7-203ENST00000359895 CENPJQ9HC77 1338 aaPredicted RBP24.65■■□□□ 1.54
PDLIM7-203ENST00000359895 ERICH6BQ5W0A0 696 aa24.64■■□□□ 1.54
PDLIM7-203ENST00000359895 IDI1Q13907 227 aa24.63■■□□□ 1.53
PDLIM7-203ENST00000359895 CLTCQ00610 1675 aaKnown RBP24.63■■□□□ 1.53
PDLIM7-203ENST00000359895 ARHGEF28Q8N1W1 1705 aaKnown RBP24.62■■□□□ 1.53
PDLIM7-203ENST00000359895 BCANQ96GW7 911 aa24.6■■□□□ 1.53
PDLIM7-203ENST00000359895 AMER1Q5JTC6 1135 aaPredicted RBP24.59■■□□□ 1.53
PDLIM7-203ENST00000359895 NUDCQ9Y266 331 aa24.58■■□□□ 1.52
PDLIM7-203ENST00000359895 TRAK1Q9UPV9 953 aa24.55■■□□□ 1.52
PDLIM7-203ENST00000359895 SPATA31D1Q6ZQQ2 1576 aa24.55■■□□□ 1.52
PDLIM7-203ENST00000359895 BLMP54132 1417 aaPredicted RBP24.53■■□□□ 1.52
PDLIM7-203ENST00000359895 PUS7Q96PZ0 661 aaKnown RBP24.53■■□□□ 1.52
PDLIM7-203ENST00000359895 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
PDLIM7-203ENST00000359895 PPP2R1AP30153 589 aa24.51■■□□□ 1.51
PDLIM7-203ENST00000359895 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
PDLIM7-203ENST00000359895 PDE3BQ13370 1112 aa24.49■■□□□ 1.51
PDLIM7-203ENST00000359895 FBXO31Q5XUX0 539 aaPredicted RBP24.48■■□□□ 1.51
PDLIM7-203ENST00000359895 USP32Q8NFA0 1604 aa24.48■■□□□ 1.51
PDLIM7-203ENST00000359895 NUTM2DQ5VT03 806 aaPredicted RBP24.46■■□□□ 1.51
PDLIM7-203ENST00000359895 EVC2Q86UK5 1308 aa24.45■■□□□ 1.5
PDLIM7-203ENST00000359895 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
PDLIM7-203ENST00000359895 RNF123Q5XPI4 1314 aa24.43■■□□□ 1.5
PDLIM7-203ENST00000359895 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
PDLIM7-203ENST00000359895 IRX6P78412 446 aaPredicted RBP24.42■■□□□ 1.5
PDLIM7-203ENST00000359895 PPP4R2Q9NY27 417 aa24.42■■□□□ 1.5
PDLIM7-203ENST00000359895 ALKQ9UM73 1620 aa24.42■■□□□ 1.5
PDLIM7-203ENST00000359895 CARD14Q9BXL6 1004 aa24.42■■□□□ 1.5
PDLIM7-203ENST00000359895 A2ML1A8K2U0 1454 aa24.41■■□□□ 1.5
PDLIM7-203ENST00000359895 WDR43Q15061 677 aaKnown RBP eCLIP24.41■■□□□ 1.5
PDLIM7-203ENST00000359895 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
PDLIM7-203ENST00000359895 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
PDLIM7-203ENST00000359895 PTPRMP28827 1452 aa24.38■■□□□ 1.49
PDLIM7-203ENST00000359895 NINLQ9Y2I6 1382 aa24.37■■□□□ 1.49
PDLIM7-203ENST00000359895 NSD3Q9BZ95 1437 aa24.37■■□□□ 1.49
PDLIM7-203ENST00000359895 MLECQ14165 292 aa24.37■■□□□ 1.49
PDLIM7-203ENST00000359895 ADAMTSL3P82987 1691 aa24.36■■□□□ 1.49
PDLIM7-203ENST00000359895 RIMS2Q9UQ26 1411 aa24.35■■□□□ 1.49
PDLIM7-203ENST00000359895 ADAMTS8Q9UP79 889 aa24.35■■□□□ 1.49
PDLIM7-203ENST00000359895 FER1L4A9Z1Z3 1794 aa24.35■■□□□ 1.49
PDLIM7-203ENST00000359895 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms