RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 IDI1Q13907 227 aa28.97■■■□□ 2.23
FAM3A-202ENST00000359889 KIAA1210Q9ULL0 1709 aa28.97■■■□□ 2.23
FAM3A-202ENST00000359889 EIF3AQ14152 1382 aaKnown RBP28.96■■■□□ 2.23
FAM3A-202ENST00000359889 SCAF11Q99590 1463 aaKnown RBP28.96■■■□□ 2.23
FAM3A-202ENST00000359889 NRXN1Q9ULB1 1477 aa28.96■■■□□ 2.23
FAM3A-202ENST00000359889 ERVK-7P63135 1459 aa28.94■■■□□ 2.22
FAM3A-202ENST00000359889 VGFO15240 615 aaPredicted RBP28.94■■■□□ 2.22
FAM3A-202ENST00000359889 TMF1P82094 1093 aa28.94■■■□□ 2.22
FAM3A-202ENST00000359889 PREX1Q8TCU6 1659 aa28.94■■■□□ 2.22
FAM3A-202ENST00000359889 IFT172Q9UG01 1749 aa28.93■■■□□ 2.22
FAM3A-202ENST00000359889 CFAP65Q6ZU64 1925 aaKnown RBP28.93■■■□□ 2.22
FAM3A-202ENST00000359889 CFAP70Q5T0N1 1121 aa28.92■■■□□ 2.22
FAM3A-202ENST00000359889 SLC24A1O60721 1099 aa28.91■■■□□ 2.22
FAM3A-202ENST00000359889 FBXO31Q5XUX0 539 aaPredicted RBP28.91■■■□□ 2.22
FAM3A-202ENST00000359889 TESK2Q96S53 571 aa28.9■■■□□ 2.22
FAM3A-202ENST00000359889 DNAJC5Q9H3Z4 198 aa28.89■■■□□ 2.22
FAM3A-202ENST00000359889 CLTCQ00610 1675 aaKnown RBP28.89■■■□□ 2.22
FAM3A-202ENST00000359889 PIK3C2GO75747 1445 aa28.87■■■□□ 2.21
FAM3A-202ENST00000359889 CDCA8Q53HL2 280 aa28.86■■■□□ 2.21
FAM3A-202ENST00000359889 STAG3Q9UJ98 1225 aa28.86■■■□□ 2.21
FAM3A-202ENST00000359889 IQGAP1P46940 1657 aa28.86■■■□□ 2.21
FAM3A-202ENST00000359889 C14orf93Q9H972 538 aaKnown RBP28.86■■■□□ 2.21
FAM3A-202ENST00000359889 PPLO60437 1756 aa28.85■■■□□ 2.21
FAM3A-202ENST00000359889 PRKRIP1Q9H875 184 aaPredicted RBP28.84■■■□□ 2.21
FAM3A-202ENST00000359889 ZFYVE9O95405 1425 aa28.83■■■□□ 2.21
FAM3A-202ENST00000359889 ZMYM3Q14202 1370 aa28.83■■■□□ 2.21
FAM3A-202ENST00000359889 SPATA31D1Q6ZQQ2 1576 aa28.82■■■□□ 2.2
FAM3A-202ENST00000359889 SETBP1Q9Y6X0 1596 aa28.82■■■□□ 2.2
FAM3A-202ENST00000359889 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
FAM3A-202ENST00000359889 DISP3Q9P2K9 1392 aa28.79■■■□□ 2.2
FAM3A-202ENST00000359889 TMEM131LA2VDJ0 1609 aa28.78■■■□□ 2.2
FAM3A-202ENST00000359889 NUTM2DQ5VT03 806 aaPredicted RBP28.73■■■□□ 2.19
FAM3A-202ENST00000359889 KTN1Q86UP2 1357 aaKnown RBP28.7■■■□□ 2.18
FAM3A-202ENST00000359889 TNRQ92752 1358 aa28.69■■■□□ 2.18
FAM3A-202ENST00000359889 CENPJQ9HC77 1338 aaPredicted RBP28.68■■■□□ 2.18
FAM3A-202ENST00000359889 SBNO2Q9Y2G9 1366 aa28.68■■■□□ 2.18
FAM3A-202ENST00000359889 ADGRB1O14514 1584 aa28.67■■■□□ 2.18
FAM3A-202ENST00000359889 A2ML1A8K2U0 1454 aa28.67■■■□□ 2.18
FAM3A-202ENST00000359889 TRAK1Q9UPV9 953 aa28.66■■■□□ 2.18
FAM3A-202ENST00000359889 HDGFP51858 240 aaKnown RBP28.66■■■□□ 2.18
FAM3A-202ENST00000359889 TMEM132EQ6IEE7 984 aa28.66■■■□□ 2.18
FAM3A-202ENST00000359889 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.65■■■□□ 2.18
FAM3A-202ENST00000359889 RALBP1Q15311 655 aa28.64■■■□□ 2.18
FAM3A-202ENST00000359889 MRS2Q9HD23 443 aa28.64■■■□□ 2.18
FAM3A-202ENST00000359889 MYO3AQ8NEV4 1616 aa28.62■■■□□ 2.17
FAM3A-202ENST00000359889 PANK3Q9H999 370 aa28.62■■■□□ 2.17
FAM3A-202ENST00000359889 RIMS2Q9UQ26 1411 aa28.62■■■□□ 2.17
FAM3A-202ENST00000359889 MYO5BQ9ULV0 1848 aa28.59■■■□□ 2.17
FAM3A-202ENST00000359889 CNGB1Q14028 1251 aaPredicted RBP28.58■■■□□ 2.17
FAM3A-202ENST00000359889 PER1O15534 1290 aaPredicted RBP28.57■■■□□ 2.16
FAM3A-202ENST00000359889 MYBBP1AQ9BQG0 1328 aaKnown RBP28.53■■■□□ 2.16
FAM3A-202ENST00000359889 NLRP1Q9C000 1473 aa28.53■■■□□ 2.16
FAM3A-202ENST00000359889 KNSTRNQ9Y448 316 aa28.53■■■□□ 2.16
FAM3A-202ENST00000359889 KDM5AP29375 1690 aaKnown RBP28.52■■■□□ 2.16
FAM3A-202ENST00000359889 CCDC184Q52MB2 194 aa28.51■■■□□ 2.15
FAM3A-202ENST00000359889 STK26Q9P289 416 aa28.49■■■□□ 2.15
FAM3A-202ENST00000359889 ALKQ9UM73 1620 aa28.49■■■□□ 2.15
FAM3A-202ENST00000359889 TMC1Q8TDI8 760 aa28.49■■■□□ 2.15
FAM3A-202ENST00000359889 PUS7Q96PZ0 661 aaKnown RBP28.49■■■□□ 2.15
FAM3A-202ENST00000359889 EVC2Q86UK5 1308 aa28.49■■■□□ 2.15
FAM3A-202ENST00000359889 PARD3Q8TEW0 1356 aa28.48■■■□□ 2.15
FAM3A-202ENST00000359889 YTHDC2Q9H6S0 1430 aaKnown RBP28.48■■■□□ 2.15
FAM3A-202ENST00000359889 CEBPAP49715 358 aaPredicted RBP28.47■■■□□ 2.15
FAM3A-202ENST00000359889 FAM9BQ8IZU0 186 aa28.46■■■□□ 2.15
FAM3A-202ENST00000359889 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
FAM3A-202ENST00000359889 TMEM2Q9UHN6 1383 aa28.46■■■□□ 2.15
FAM3A-202ENST00000359889 QRICH2Q9H0J4 1663 aa28.46■■■□□ 2.15
FAM3A-202ENST00000359889 ASXL1Q8IXJ9 1541 aa28.46■■■□□ 2.15
FAM3A-202ENST00000359889 BRD4O60885 1362 aaPredicted RBP28.46■■■□□ 2.15
FAM3A-202ENST00000359889 HNRNPUQ00839 825 aaKnown RBP eCLIP28.44■■■□□ 2.14
FAM3A-202ENST00000359889 POGKQ9P215 609 aa28.44■■■□□ 2.14
FAM3A-202ENST00000359889 FER1L4A9Z1Z3 1794 aa28.44■■■□□ 2.14
FAM3A-202ENST00000359889 CC2D1BQ5T0F9 858 aaKnown RBP28.43■■■□□ 2.14
FAM3A-202ENST00000359889 NLRP13Q86W25 1043 aa28.43■■■□□ 2.14
FAM3A-202ENST00000359889 SCAF1Q9H7N4 1312 aaKnown RBP28.43■■■□□ 2.14
FAM3A-202ENST00000359889 ARHGEF28Q8N1W1 1705 aaKnown RBP28.42■■■□□ 2.14
FAM3A-202ENST00000359889 BCANQ96GW7 911 aa28.4■■■□□ 2.14
FAM3A-202ENST00000359889 GTF3C3Q9Y5Q9 886 aa28.4■■■□□ 2.14
FAM3A-202ENST00000359889 C3P01024 1663 aa28.4■■■□□ 2.14
FAM3A-202ENST00000359889 LRPPRCP42704 1394 aaKnown RBP28.4■■■□□ 2.14
FAM3A-202ENST00000359889 PRAM1Q96QH2 718 aa28.39■■■□□ 2.14
FAM3A-202ENST00000359889 PLPPR3Q6T4P5 718 aa28.38■■■□□ 2.13
FAM3A-202ENST00000359889 EID1Q9Y6B2 187 aa28.38■■■□□ 2.13
FAM3A-202ENST00000359889 NPC1L1Q9UHC9 1359 aa28.38■■■□□ 2.13
FAM3A-202ENST00000359889 UBR1Q8IWV7 1749 aa28.38■■■□□ 2.13
FAM3A-202ENST00000359889 PTPRMP28827 1452 aa28.37■■■□□ 2.13
FAM3A-202ENST00000359889 MYOM1P52179 1685 aa28.37■■■□□ 2.13
FAM3A-202ENST00000359889 SAFB2Q14151 953 aaKnown RBP eCLIP28.35■■■□□ 2.13
FAM3A-202ENST00000359889 AMER1Q5JTC6 1135 aaPredicted RBP28.35■■■□□ 2.13
FAM3A-202ENST00000359889 ABCC11Q96J66 1382 aa28.35■■■□□ 2.13
FAM3A-202ENST00000359889 DLC1Q96QB1 1528 aa28.35■■■□□ 2.13
FAM3A-202ENST00000359889 THEMISQ8N1K5 641 aaPredicted RBP28.35■■■□□ 2.13
FAM3A-202ENST00000359889 PNISRQ8TF01 805 aaKnown RBP28.33■■■□□ 2.13
FAM3A-202ENST00000359889 TXNDC2Q86VQ3 553 aa28.32■■■□□ 2.12
FAM3A-202ENST00000359889 PLEKHG1Q9ULL1 1385 aa28.31■■■□□ 2.12
FAM3A-202ENST00000359889 NINLQ9Y2I6 1382 aa28.31■■■□□ 2.12
FAM3A-202ENST00000359889 TULP4Q9NRJ4 1543 aa28.3■■■□□ 2.12
FAM3A-202ENST00000359889 SRPK2P78362 688 aaKnown RBP28.3■■■□□ 2.12
FAM3A-202ENST00000359889 MINK1Q8N4C8 1332 aaPredicted RBP28.29■■■□□ 2.12
FAM3A-202ENST00000359889 SIRT1Q96EB6 747 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms