RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 INSRP06213 1382 aa27.09■■□□□ 1.93
TRIM3-202ENST00000359518 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
TRIM3-202ENST00000359518 SLFN5Q08AF3 891 aa27.08■■□□□ 1.93
TRIM3-202ENST00000359518 CDCA8Q53HL2 280 aa27.08■■□□□ 1.93
TRIM3-202ENST00000359518 ZNF521Q96K83 1311 aa27.08■■□□□ 1.93
TRIM3-202ENST00000359518 PPM1GO15355 546 aaPredicted RBP27.08■■□□□ 1.93
TRIM3-202ENST00000359518 DAXXQ9UER7 740 aaPredicted RBP27.08■■□□□ 1.93
TRIM3-202ENST00000359518 DDRGK1Q96HY6 314 aa27.07■■□□□ 1.92
TRIM3-202ENST00000359518 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.07■■□□□ 1.92
TRIM3-202ENST00000359518 ATP10AO60312 1499 aa27.06■■□□□ 1.92
TRIM3-202ENST00000359518 PLXNC1O60486 1568 aa27.06■■□□□ 1.92
TRIM3-202ENST00000359518 CFAP70Q5T0N1 1121 aa27.06■■□□□ 1.92
TRIM3-202ENST00000359518 DMRT2Q9Y5R5 561 aa27.06■■□□□ 1.92
TRIM3-202ENST00000359518 PLCH2O75038 1416 aa27.02■■□□□ 1.92
TRIM3-202ENST00000359518 FAM161AQ3B820 660 aa27.02■■□□□ 1.92
TRIM3-202ENST00000359518 C8orf34Q49A92 452 aa27.02■■□□□ 1.92
TRIM3-202ENST00000359518 TNNT2P45379 298 aaPredicted RBP27.01■■□□□ 1.91
TRIM3-202ENST00000359518 USP35Q9P2H5 1018 aa27.01■■□□□ 1.91
TRIM3-202ENST00000359518 NEUROD2Q15784 382 aa27■■□□□ 1.91
TRIM3-202ENST00000359518 SCAF11Q99590 1463 aaKnown RBP27■■□□□ 1.91
TRIM3-202ENST00000359518 KIF3BO15066 747 aa27■■□□□ 1.91
TRIM3-202ENST00000359518 ASXL1Q8IXJ9 1541 aa26.99■■□□□ 1.91
TRIM3-202ENST00000359518 MADDQ8WXG6 1647 aa26.98■■□□□ 1.91
TRIM3-202ENST00000359518 RNF17Q9BXT8 1623 aaKnown RBP26.98■■□□□ 1.91
TRIM3-202ENST00000359518 ABCC2Q92887 1545 aa26.98■■□□□ 1.91
TRIM3-202ENST00000359518 NFKBIBQ15653 356 aa26.98■■□□□ 1.91
TRIM3-202ENST00000359518 CHD1O14646 1710 aa26.97■■□□□ 1.91
TRIM3-202ENST00000359518 CARD14Q9BXL6 1004 aa26.97■■□□□ 1.91
TRIM3-202ENST00000359518 ADGRF5Q8IZF2 1346 aa26.95■■□□□ 1.9
TRIM3-202ENST00000359518 RRP7AQ9Y3A4 280 aaKnown RBP26.93■■□□□ 1.9
TRIM3-202ENST00000359518 IGHDP01880 384 aa26.93■■□□□ 1.9
TRIM3-202ENST00000359518 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
TRIM3-202ENST00000359518 CANXP27824 592 aaKnown RBP26.93■■□□□ 1.9
TRIM3-202ENST00000359518 TRMT2AQ8IZ69 625 aaKnown RBP26.92■■□□□ 1.9
TRIM3-202ENST00000359518 PIK3C2GO75747 1445 aa26.92■■□□□ 1.9
TRIM3-202ENST00000359518 PANK1Q8TE04 598 aa26.92■■□□□ 1.9
TRIM3-202ENST00000359518 IQGAP1P46940 1657 aa26.91■■□□□ 1.9
TRIM3-202ENST00000359518 FRAT1Q92837 279 aaPredicted RBP26.91■■□□□ 1.9
TRIM3-202ENST00000359518 COG6Q9Y2V7 657 aa26.9■■□□□ 1.9
TRIM3-202ENST00000359518 EIF3AQ14152 1382 aaKnown RBP26.9■■□□□ 1.9
TRIM3-202ENST00000359518 E9PSI1 815 aa26.89■■□□□ 1.9
TRIM3-202ENST00000359518 SYNMO15061 1565 aa26.89■■□□□ 1.9
TRIM3-202ENST00000359518 CLTCL1P53675 1640 aa26.89■■□□□ 1.89
TRIM3-202ENST00000359518 NKTRP30414 1462 aaKnown RBP26.88■■□□□ 1.89
TRIM3-202ENST00000359518 ABCC1P33527 1531 aa26.88■■□□□ 1.89
TRIM3-202ENST00000359518 UGGT1Q9NYU2 1555 aa26.86■■□□□ 1.89
TRIM3-202ENST00000359518 TRPM2O94759 1503 aa26.86■■□□□ 1.89
TRIM3-202ENST00000359518 SCAPERQ9BY12 1400 aa26.85■■□□□ 1.89
TRIM3-202ENST00000359518 GSE1Q14687 1217 aa26.84■■□□□ 1.89
TRIM3-202ENST00000359518 KANK1Q14678 1352 aa26.84■■□□□ 1.89
TRIM3-202ENST00000359518 BRPF3Q9ULD4 1205 aa26.84■■□□□ 1.89
TRIM3-202ENST00000359518 TRAK1Q9UPV9 953 aa26.84■■□□□ 1.89
TRIM3-202ENST00000359518 PTPRTO14522 1441 aa26.83■■□□□ 1.89
TRIM3-202ENST00000359518 BCL2L13Q9BXK5 485 aa26.83■■□□□ 1.89
TRIM3-202ENST00000359518 CENPJQ9HC77 1338 aaPredicted RBP26.83■■□□□ 1.89
TRIM3-202ENST00000359518 FRAT2O75474 233 aaPredicted RBP26.83■■□□□ 1.89
TRIM3-202ENST00000359518 WWC1Q8IX03 1113 aa26.83■■□□□ 1.89
TRIM3-202ENST00000359518 SPHKAPQ2M3C7 1700 aa26.82■■□□□ 1.88
TRIM3-202ENST00000359518 SENP3Q9H4L4 574 aaPredicted RBP26.82■■□□□ 1.88
TRIM3-202ENST00000359518 MYOM1P52179 1685 aa26.81■■□□□ 1.88
TRIM3-202ENST00000359518 SLC12A5Q9H2X9 1139 aa26.81■■□□□ 1.88
TRIM3-202ENST00000359518 ZCCHC11Q5TAX3 1644 aaKnown RBP26.81■■□□□ 1.88
TRIM3-202ENST00000359518 STAC3Q96MF2 364 aa26.81■■□□□ 1.88
TRIM3-202ENST00000359518 ANO8Q9HCE9 1232 aaPredicted RBP26.81■■□□□ 1.88
TRIM3-202ENST00000359518 NPC1L1Q9UHC9 1359 aa26.8■■□□□ 1.88
TRIM3-202ENST00000359518 ERVK-7P63135 1459 aa26.8■■□□□ 1.88
TRIM3-202ENST00000359518 SEC24BO95487 1268 aa26.8■■□□□ 1.88
TRIM3-202ENST00000359518 MORC1Q86VD1 984 aa26.8■■□□□ 1.88
TRIM3-202ENST00000359518 TNNQ9UQP3 1299 aa26.8■■□□□ 1.88
TRIM3-202ENST00000359518 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
TRIM3-202ENST00000359518 TMEM132EQ6IEE7 984 aa26.77■■□□□ 1.88
TRIM3-202ENST00000359518 CLUAP1Q96AJ1 413 aa26.77■■□□□ 1.88
TRIM3-202ENST00000359518 CEP152O94986 1710 aa26.77■■□□□ 1.88
TRIM3-202ENST00000359518 ZFYVE16Q7Z3T8 1539 aa26.76■■□□□ 1.88
TRIM3-202ENST00000359518 KDM5AP29375 1690 aaKnown RBP26.76■■□□□ 1.87
TRIM3-202ENST00000359518 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
TRIM3-202ENST00000359518 CGNL1Q0VF96 1302 aa26.74■■□□□ 1.87
TRIM3-202ENST00000359518 NUTM2DQ5VT03 806 aaPredicted RBP26.74■■□□□ 1.87
TRIM3-202ENST00000359518 TCP11L2Q8N4U5 519 aa26.74■■□□□ 1.87
TRIM3-202ENST00000359518 RTEL1-TNFRSF6BF6WH68 1400 aa26.72■■□□□ 1.87
TRIM3-202ENST00000359518 PDE3AQ14432 1141 aa26.72■■□□□ 1.87
TRIM3-202ENST00000359518 NSD3Q9BZ95 1437 aa26.71■■□□□ 1.87
TRIM3-202ENST00000359518 RLBP1P12271 317 aa26.71■■□□□ 1.87
TRIM3-202ENST00000359518 USP19O94966 1318 aa26.69■■□□□ 1.86
TRIM3-202ENST00000359518 MTHFSP49914 203 aa26.69■■□□□ 1.86
TRIM3-202ENST00000359518 SLKQ9H2G2 1235 aaPredicted RBP26.69■■□□□ 1.86
TRIM3-202ENST00000359518 FANCAO15360 1455 aa26.68■■□□□ 1.86
TRIM3-202ENST00000359518 RARSP54136 660 aaKnown RBP26.68■■□□□ 1.86
TRIM3-202ENST00000359518 PCDHB15Q9Y5E8 787 aa26.68■■□□□ 1.86
TRIM3-202ENST00000359518 TET3O43151 1660 aa26.67■■□□□ 1.86
TRIM3-202ENST00000359518 NOS1P29475 1434 aa26.67■■□□□ 1.86
TRIM3-202ENST00000359518 RUNDC1Q96C34 613 aa26.66■■□□□ 1.86
TRIM3-202ENST00000359518 ATP7AQ04656 1500 aa26.66■■□□□ 1.86
TRIM3-202ENST00000359518 ABCA6Q8N139 1617 aa26.66■■□□□ 1.86
TRIM3-202ENST00000359518 CFAP65Q6ZU64 1925 aaKnown RBP26.66■■□□□ 1.86
TRIM3-202ENST00000359518 GGT6Q6P531 493 aa26.66■■□□□ 1.86
TRIM3-202ENST00000359518 SLC24A1O60721 1099 aa26.65■■□□□ 1.86
TRIM3-202ENST00000359518 POLR3AO14802 1390 aaPredicted RBP26.65■■□□□ 1.86
TRIM3-202ENST00000359518 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
TRIM3-202ENST00000359518 MAP3K4Q9Y6R4 1608 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms