RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
PTPA-206ENST00000358994 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
PTPA-206ENST00000358994 MCM4P33991 863 aa23.2■■□□□ 1.3
PTPA-206ENST00000358994 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
PTPA-206ENST00000358994 TMF1P82094 1093 aa23.19■■□□□ 1.3
PTPA-206ENST00000358994 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
PTPA-206ENST00000358994 TBC1D32Q96NH3 1257 aa23.19■■□□□ 1.3
PTPA-206ENST00000358994 LAMC1P11047 1609 aa23.18■■□□□ 1.3
PTPA-206ENST00000358994 CDC42BPAQ5VT25 1732 aa23.17■■□□□ 1.3
PTPA-206ENST00000358994 CCDC146Q8IYE0 955 aa23.17■■□□□ 1.3
PTPA-206ENST00000358994 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
PTPA-206ENST00000358994 CGNL1Q0VF96 1302 aa23.17■■□□□ 1.3
PTPA-206ENST00000358994 CLUAP1Q96AJ1 413 aa23.16■■□□□ 1.3
PTPA-206ENST00000358994 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
PTPA-206ENST00000358994 SHANK2Q9UPX8 1470 aa23.15■■□□□ 1.3
PTPA-206ENST00000358994 SPRYD3Q8NCJ5 442 aa23.15■■□□□ 1.3
PTPA-206ENST00000358994 CCDC144AA2RUR9 1427 aa23.14■■□□□ 1.3
PTPA-206ENST00000358994 A2MP01023 1474 aa23.14■■□□□ 1.3
PTPA-206ENST00000358994 PDE3AQ14432 1141 aa23.14■■□□□ 1.29
PTPA-206ENST00000358994 UPF2Q9HAU5 1272 aaKnown RBP23.14■■□□□ 1.29
PTPA-206ENST00000358994 COG6Q9Y2V7 657 aa23.13■■□□□ 1.29
PTPA-206ENST00000358994 KNSTRNQ9Y448 316 aa23.13■■□□□ 1.29
PTPA-206ENST00000358994 AMER1Q5JTC6 1135 aaPredicted RBP23.13■■□□□ 1.29
PTPA-206ENST00000358994 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
PTPA-206ENST00000358994 APAF1O14727 1248 aa23.12■■□□□ 1.29
PTPA-206ENST00000358994 PANK1Q8TE04 598 aa23.12■■□□□ 1.29
PTPA-206ENST00000358994 TRAK2O60296 914 aa23.12■■□□□ 1.29
PTPA-206ENST00000358994 MRE11P49959 708 aa23.12■■□□□ 1.29
PTPA-206ENST00000358994 DMRT2Q9Y5R5 561 aa23.11■■□□□ 1.29
PTPA-206ENST00000358994 FAM135AQ9P2D6 1515 aa23.11■■□□□ 1.29
PTPA-206ENST00000358994 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
PTPA-206ENST00000358994 E9PSI1 815 aa23.1■■□□□ 1.29
PTPA-206ENST00000358994 ERBB4Q15303 1308 aa23.1■■□□□ 1.29
PTPA-206ENST00000358994 ESPNB1AK53 854 aa23.08■■□□□ 1.29
PTPA-206ENST00000358994 TSPY4P0CV99 314 aa23.08■■□□□ 1.29
PTPA-206ENST00000358994 TSPY10P0CW01 314 aa23.08■■□□□ 1.29
PTPA-206ENST00000358994 MYH16Q9H6N6 1097 aa23.07■■□□□ 1.28
PTPA-206ENST00000358994 GRPEL1Q9HAV7 217 aa23.07■■□□□ 1.28
PTPA-206ENST00000358994 PIK3C2GO75747 1445 aa23.07■■□□□ 1.28
PTPA-206ENST00000358994 PLA2R1Q13018 1463 aa23.06■■□□□ 1.28
PTPA-206ENST00000358994 CHMP5Q9NZZ3 219 aa23.05■■□□□ 1.28
PTPA-206ENST00000358994 ABCC2Q92887 1545 aa23.05■■□□□ 1.28
PTPA-206ENST00000358994 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
PTPA-206ENST00000358994 MYO5CQ9NQX4 1742 aa23.05■■□□□ 1.28
PTPA-206ENST00000358994 NINLQ9Y2I6 1382 aa23.04■■□□□ 1.28
PTPA-206ENST00000358994 CANXP27824 592 aaKnown RBP23.04■■□□□ 1.28
PTPA-206ENST00000358994 CENPJQ9HC77 1338 aaPredicted RBP23.04■■□□□ 1.28
PTPA-206ENST00000358994 ZMYM3Q14202 1370 aa23.03■■□□□ 1.28
PTPA-206ENST00000358994 PDZRN3Q9UPQ7 1066 aa23.03■■□□□ 1.28
PTPA-206ENST00000358994 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
PTPA-206ENST00000358994 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
PTPA-206ENST00000358994 PMFBP1Q8TBY8 1022 aa23.02■■□□□ 1.28
PTPA-206ENST00000358994 HNRNPMP52272 730 aaKnown RBP eCLIP23■■□□□ 1.272e-7■■□□□ 14.1
PTPA-206ENST00000358994 CCDC141Q6ZP82 1450 aa23■■□□□ 1.27
PTPA-206ENST00000358994 ASXL1Q8IXJ9 1541 aa23■■□□□ 1.27
PTPA-206ENST00000358994 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
PTPA-206ENST00000358994 PLXNC1O60486 1568 aa22.99■■□□□ 1.27
PTPA-206ENST00000358994 OSCARQ8IYS5 282 aa22.98■■□□□ 1.27
PTPA-206ENST00000358994 NUP160Q12769 1436 aa22.98■■□□□ 1.27
PTPA-206ENST00000358994 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
PTPA-206ENST00000358994 ZNF692Q9BU19 519 aaPredicted RBP22.96■■□□□ 1.27
PTPA-206ENST00000358994 ISY1Q9ULR0 285 aaKnown RBP22.96■■□□□ 1.27
PTPA-206ENST00000358994 RNF17Q9BXT8 1623 aaKnown RBP22.96■■□□□ 1.27
PTPA-206ENST00000358994 DDX11L8A8MPP1 907 aa22.95■■□□□ 1.27
PTPA-206ENST00000358994 RLBP1P12271 317 aa22.95■■□□□ 1.27
PTPA-206ENST00000358994 C22orf23Q9BZE7 217 aa22.95■■□□□ 1.27
PTPA-206ENST00000358994 TNNQ9UQP3 1299 aa22.95■■□□□ 1.27
PTPA-206ENST00000358994 SYNMO15061 1565 aa22.95■■□□□ 1.26
PTPA-206ENST00000358994 TPM2P07951 284 aa22.94■■□□□ 1.26
PTPA-206ENST00000358994 GAS2L3Q86XJ1 694 aa22.94■■□□□ 1.26
PTPA-206ENST00000358994 TRIM44Q96DX7 344 aaPredicted RBP22.94■■□□□ 1.26
PTPA-206ENST00000358994 WWC1Q8IX03 1113 aa22.93■■□□□ 1.26
PTPA-206ENST00000358994 AAMPQ13685 434 aa22.92■■□□□ 1.26
PTPA-206ENST00000358994 NPC1L1Q9UHC9 1359 aa22.92■■□□□ 1.26
PTPA-206ENST00000358994 ARHGEF5Q12774 1597 aa22.92■■□□□ 1.26
PTPA-206ENST00000358994 RARSP54136 660 aaKnown RBP22.91■■□□□ 1.26
PTPA-206ENST00000358994 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
PTPA-206ENST00000358994 NGEFQ8N5V2 710 aa22.91■■□□□ 1.26
PTPA-206ENST00000358994 PDCL3Q9H2J4 239 aa22.91■■□□□ 1.26
PTPA-206ENST00000358994 PLEKHD1A6NEE1 506 aa22.9■■□□□ 1.26
PTPA-206ENST00000358994 RWDD1Q9H446 243 aaPredicted RBP22.89■■□□□ 1.26
PTPA-206ENST00000358994 DDIT3P35638 169 aa22.89■■□□□ 1.25
PTPA-206ENST00000358994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.25
PTPA-206ENST00000358994 MYOM1P52179 1685 aa22.88■■□□□ 1.25
PTPA-206ENST00000358994 IQGAP1P46940 1657 aa22.88■■□□□ 1.25
PTPA-206ENST00000358994 CHD1O14646 1710 aa22.87■■□□□ 1.25
PTPA-206ENST00000358994 NCOA3Q9Y6Q9 1424 aa22.87■■□□□ 1.25
PTPA-206ENST00000358994 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
PTPA-206ENST00000358994 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
PTPA-206ENST00000358994 HSCBQ8IWL3 235 aa22.86■■□□□ 1.25
PTPA-206ENST00000358994 UNC13BO14795 1591 aa22.85■■□□□ 1.25
PTPA-206ENST00000358994 KIAA1211Q6ZU35 1233 aa22.85■■□□□ 1.25
PTPA-206ENST00000358994 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
PTPA-206ENST00000358994 TNPO1Q92973 898 aaKnown RBP22.85■■□□□ 1.25
PTPA-206ENST00000358994 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
PTPA-206ENST00000358994 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
PTPA-206ENST00000358994 ATP10AO60312 1499 aa22.79■■□□□ 1.24
PTPA-206ENST00000358994 IQGAP3Q86VI3 1631 aa22.79■■□□□ 1.24
PTPA-206ENST00000358994 ABCA8O94911 1581 aa22.79■■□□□ 1.24
PTPA-206ENST00000358994 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms