RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 LETM1O95202 739 aaPredicted RBP10.67□□□□□ -0.7
COL6A6-201ENST00000358511 HDGFL2Q7Z4V5 671 aaPredicted RBP10.67□□□□□ -0.7
COL6A6-201ENST00000358511 ESPNB1AK53 854 aa10.67□□□□□ -0.7
COL6A6-201ENST00000358511 IPO7O95373 1038 aaKnown RBP10.67□□□□□ -0.7
COL6A6-201ENST00000358511 TPD52L1Q16890 204 aaPredicted RBP10.67□□□□□ -0.7
COL6A6-201ENST00000358511 LEKR1Q6ZMV7 388 aa10.66□□□□□ -0.7
COL6A6-201ENST00000358511 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
COL6A6-201ENST00000358511 NAT10Q9H0A0 1025 aaKnown RBP10.66□□□□□ -0.7
COL6A6-201ENST00000358511 CREBRFQ8IUR6 639 aa10.66□□□□□ -0.7
COL6A6-201ENST00000358511 GRPEL1Q9HAV7 217 aa10.66□□□□□ -0.7
COL6A6-201ENST00000358511 AKNAQ7Z591 1439 aa10.66□□□□□ -0.7
COL6A6-201ENST00000358511 H0YHG0 523 aa10.66□□□□□ -0.7
COL6A6-201ENST00000358511 CAVIN1Q6NZI2 390 aaKnown RBP10.66□□□□□ -0.7
COL6A6-201ENST00000358511 SASS6Q6UVJ0 657 aa10.65□□□□□ -0.7
COL6A6-201ENST00000358511 FAM184AQ8NB25 1140 aa10.65□□□□□ -0.7
COL6A6-201ENST00000358511 RASSF8Q8NHQ8 419 aa10.65□□□□□ -0.7
COL6A6-201ENST00000358511 BACH2Q9BYV9 841 aa10.65□□□□□ -0.7
COL6A6-201ENST00000358511 HOOK1Q9UJC3 728 aaKnown RBP10.65□□□□□ -0.7
COL6A6-201ENST00000358511 WWC1Q8IX03 1113 aa10.65□□□□□ -0.71
COL6A6-201ENST00000358511 CCDC7Q96M83 1385 aa10.64□□□□□ -0.71
COL6A6-201ENST00000358511 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
COL6A6-201ENST00000358511 INTS3Q68E01 1043 aaKnown RBP10.64□□□□□ -0.71
COL6A6-201ENST00000358511 PES1O00541 588 aaKnown RBP10.64□□□□□ -0.71
COL6A6-201ENST00000358511 CCP110O43303 1012 aa10.64□□□□□ -0.71
COL6A6-201ENST00000358511 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
COL6A6-201ENST00000358511 TSPY26PQ9H489 355 aa10.64□□□□□ -0.71
COL6A6-201ENST00000358511 PATL2C9JE40 543 aaKnown RBP10.63□□□□□ -0.71
COL6A6-201ENST00000358511 ANKRD20A12PQ8NF67 263 aa10.63□□□□□ -0.71
COL6A6-201ENST00000358511 PDCL3Q9H2J4 239 aa10.63□□□□□ -0.71
COL6A6-201ENST00000358511 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
COL6A6-201ENST00000358511 RILPL2Q969X0 211 aa10.63□□□□□ -0.71
COL6A6-201ENST00000358511 CDR1P51861 262 aa10.63□□□□□ -0.71
COL6A6-201ENST00000358511 TSPYL1Q9H0U9 437 aa10.63□□□□□ -0.71
COL6A6-201ENST00000358511 ERCC4Q92889 916 aaPredicted RBP10.62□□□□□ -0.71
COL6A6-201ENST00000358511 BCL2L13Q9BXK5 485 aa10.62□□□□□ -0.71
COL6A6-201ENST00000358511 SMG6Q86US8 1419 aaKnown RBP10.62□□□□□ -0.71
COL6A6-201ENST00000358511 ZKSCAN1P17029 563 aaPredicted RBP10.62□□□□□ -0.71
COL6A6-201ENST00000358511 DCTN1Q14203 1278 aa10.62□□□□□ -0.71
COL6A6-201ENST00000358511 CCDC191Q8NCU4 936 aa10.62□□□□□ -0.71
COL6A6-201ENST00000358511 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
COL6A6-201ENST00000358511 DZIP1LQ8IYY4 767 aaKnown RBP10.62□□□□□ -0.71
COL6A6-201ENST00000358511 SLC4A10Q6U841 1118 aa10.62□□□□□ -0.71
COL6A6-201ENST00000358511 NINLQ9Y2I6 1382 aa10.62□□□□□ -0.71
COL6A6-201ENST00000358511 RRP12Q5JTH9 1297 aaKnown RBP10.61□□□□□ -0.71
COL6A6-201ENST00000358511 RUFY2Q8WXA3 655 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 CEP89Q96ST8 783 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 TERF2IPQ9NYB0 399 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 PANK3Q9H999 370 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 UACAQ9BZF9 1416 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 RNF214Q8ND24 703 aa10.61□□□□□ -0.71
COL6A6-201ENST00000358511 CHMP3Q9Y3E7 222 aa10.6□□□□□ -0.71
COL6A6-201ENST00000358511 ZSCAN30Q86W11 494 aa10.6□□□□□ -0.71
COL6A6-201ENST00000358511 DHX8Q14562 1220 aaKnown RBP10.6□□□□□ -0.71
COL6A6-201ENST00000358511 MSH5O43196 834 aa10.6□□□□□ -0.71
COL6A6-201ENST00000358511 RRP7AQ9Y3A4 280 aaKnown RBP10.59□□□□□ -0.71
COL6A6-201ENST00000358511 TRIM5Q9C035 493 aa10.59□□□□□ -0.71
COL6A6-201ENST00000358511 DEF6Q9H4E7 631 aa10.59□□□□□ -0.71
COL6A6-201ENST00000358511 SMARCA4P51532 1647 aa10.59□□□□□ -0.71
COL6A6-201ENST00000358511 SMC3Q9UQE7 1217 aa10.59□□□□□ -0.71
COL6A6-201ENST00000358511 USP8P40818 1118 aa10.59□□□□□ -0.71
COL6A6-201ENST00000358511 KIF7Q2M1P5 1343 aa10.59□□□□□ -0.71
COL6A6-201ENST00000358511 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
COL6A6-201ENST00000358511 CCDC73Q6ZRK6 1079 aa10.58□□□□□ -0.71
COL6A6-201ENST00000358511 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.58□□□□□ -0.72
COL6A6-201ENST00000358511 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL6A6-201ENST00000358511 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
COL6A6-201ENST00000358511 SUPT6HQ7KZ85 1726 aaKnown RBP10.58□□□□□ -0.72
COL6A6-201ENST00000358511 VPS37CA5D8V6 355 aaPredicted RBP10.58□□□□□ -0.72
COL6A6-201ENST00000358511 CCDC112Q8NEF3 446 aa10.58□□□□□ -0.72
COL6A6-201ENST00000358511 CDC45O75419 566 aa10.57□□□□□ -0.72
COL6A6-201ENST00000358511 MCM2P49736 904 aa10.57□□□□□ -0.72
COL6A6-201ENST00000358511 TMX4Q9H1E5 349 aaPredicted RBP10.57□□□□□ -0.72
COL6A6-201ENST00000358511 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
COL6A6-201ENST00000358511 RABEP1Q15276 862 aa10.57□□□□□ -0.72
COL6A6-201ENST00000358511 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
COL6A6-201ENST00000358511 FHOD3Q2V2M9 1422 aa10.57□□□□□ -0.72
COL6A6-201ENST00000358511 ANO2Q9NQ90 1003 aa10.56□□□□□ -0.72
COL6A6-201ENST00000358511 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
COL6A6-201ENST00000358511 MIA2Q96PC5 1412 aa10.55□□□□□ -0.72
COL6A6-201ENST00000358511 WASHC2AQ641Q2 1341 aa10.55□□□□□ -0.72
COL6A6-201ENST00000358511 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
COL6A6-201ENST00000358511 SOX12O15370 315 aa10.55□□□□□ -0.72
COL6A6-201ENST00000358511 KIAA0754O94854 1291 aa10.55□□□□□ -0.72
COL6A6-201ENST00000358511 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
COL6A6-201ENST00000358511 EIF3JO75822 258 aaKnown RBP10.55□□□□□ -0.72
COL6A6-201ENST00000358511 CCDC192P0DO97 292 aa10.55□□□□□ -0.72
COL6A6-201ENST00000358511 MCM4P33991 863 aa10.54□□□□□ -0.72
COL6A6-201ENST00000358511 PDCP20941 246 aa10.54□□□□□ -0.72
COL6A6-201ENST00000358511 PRPF40AO75400 957 aaKnown RBP10.54□□□□□ -0.72
COL6A6-201ENST00000358511 APAF1O14727 1248 aa10.54□□□□□ -0.72
COL6A6-201ENST00000358511 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
COL6A6-201ENST00000358511 CAGE1Q8TC20 777 aa10.54□□□□□ -0.72
COL6A6-201ENST00000358511 PLEKHH2Q8IVE3 1493 aa10.53□□□□□ -0.72
COL6A6-201ENST00000358511 PANK1Q8TE04 598 aa10.53□□□□□ -0.72
COL6A6-201ENST00000358511 CALCOCO1Q9P1Z2 691 aa10.53□□□□□ -0.72
COL6A6-201ENST00000358511 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
COL6A6-201ENST00000358511 KINO60870 393 aaKnown RBP10.53□□□□□ -0.72
COL6A6-201ENST00000358511 TRIM29Q14134 588 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms