RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 PIP4K2AP48426 406 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 JAKMIP3Q5VZ66 844 aa5.66□□□□□ -1.5
SYNE2-203ENST00000357395 CGNQ9P2M7 1197 aaKnown RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 MEX3CQ5U5Q3 659 aaKnown RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 MPHOSPH10O00566 681 aaKnown RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 H0YHG0 523 aa5.66□□□□□ -1.5
SYNE2-203ENST00000357395 NOL10Q9BSC4 688 aaKnown RBP5.65□□□□□ -1.5
SYNE2-203ENST00000357395 RCAN3Q9UKA8 241 aa5.65□□□□□ -1.5
SYNE2-203ENST00000357395 ZNF622Q969S3 477 aaKnown RBP eCLIP5.65□□□□□ -1.5
SYNE2-203ENST00000357395 E9PSI1 815 aa5.65□□□□□ -1.5
SYNE2-203ENST00000357395 PLCB2Q00722 1185 aa5.65□□□□□ -1.5
SYNE2-203ENST00000357395 GIMAP7Q8NHV1 300 aa5.65□□□□□ -1.51
SYNE2-203ENST00000357395 PDCP20941 246 aa5.65□□□□□ -1.51
SYNE2-203ENST00000357395 DDX12PQ92771 950 aa5.65□□□□□ -1.51
SYNE2-203ENST00000357395 NLRP13Q86W25 1043 aa5.65□□□□□ -1.51
SYNE2-203ENST00000357395 PLEKHH1Q9ULM0 1364 aa5.65□□□□□ -1.51
SYNE2-203ENST00000357395 SMAP1Q8IYB5 467 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-203ENST00000357395 CPSF2Q9P2I0 782 aaKnown RBP5.64□□□□□ -1.51
SYNE2-203ENST00000357395 ITGB1BP2Q9UKP3 347 aa5.64□□□□□ -1.51
SYNE2-203ENST00000357395 ERLIN2O94905 339 aa5.64□□□□□ -1.51
SYNE2-203ENST00000357395 GZF1Q9H116 711 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-203ENST00000357395 BAZ1AQ9NRL2 1556 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-203ENST00000357395 KIF3CO14782 793 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 ZNHIT6Q9NWK9 470 aaKnown RBP5.63□□□□□ -1.51
SYNE2-203ENST00000357395 TUBB2AQ13885 445 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 TUBB2BQ9BVA1 445 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 FGD1P98174 961 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 CCDC7Q96M83 1385 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 PAXBP1Q9Y5B6 917 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 ZSCAN30Q86W11 494 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 NBPF1Q3BBV0 1214 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 CEP120Q8N960 986 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 RBM26Q5T8P6 1007 aaKnown RBP5.63□□□□□ -1.51
SYNE2-203ENST00000357395 PLCD4Q9BRC7 762 aa5.63□□□□□ -1.51
SYNE2-203ENST00000357395 CCDC9Q9Y3X0 531 aaKnown RBP5.62□□□□□ -1.51
SYNE2-203ENST00000357395 RBM25P49756 843 aaKnown RBP5.62□□□□□ -1.51
SYNE2-203ENST00000357395 C14orf37Q86TY3 774 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 ANKRD18BA2A2Z9 1011 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 CFAP57Q96MR6 1250 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 SUDS3Q9H7L9 328 aaPredicted RBP5.62□□□□□ -1.51
SYNE2-203ENST00000357395 PLEKHH2Q8IVE3 1493 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 SF3B2Q13435 895 aaKnown RBP5.62□□□□□ -1.51
SYNE2-203ENST00000357395 MFAP1P55081 439 aaKnown RBP5.62□□□□□ -1.51
SYNE2-203ENST00000357395 SRPK2P78362 688 aaKnown RBP5.62□□□□□ -1.51
SYNE2-203ENST00000357395 RGS3P49796 1198 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 PSMD1Q99460 953 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 SEPT14Q6ZU15 432 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 ZNF428Q96B54 188 aa5.62□□□□□ -1.51
SYNE2-203ENST00000357395 BECN2A8MW95 431 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 BMS1Q14692 1282 aaKnown RBP5.61□□□□□ -1.51
SYNE2-203ENST00000357395 ESPNB1AK53 854 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 CNPY4Q8N129 248 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 SLC26A8Q96RN1 970 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 CENPJQ9HC77 1338 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-203ENST00000357395 SPC24Q8NBT2 197 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 ZMYND15Q9H091 742 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 PDE4AP27815 886 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 PPFIA3O75145 1194 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 EZRP15311 586 aaKnown RBP5.61□□□□□ -1.51
SYNE2-203ENST00000357395 SASS6Q6UVJ0 657 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 ZHX1Q9UKY1 873 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-203ENST00000357395 CCDC144AA2RUR9 1427 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 WDR66Q8TBY9 1149 aa5.61□□□□□ -1.51
SYNE2-203ENST00000357395 ZCCHC6Q5VYS8 1495 aaKnown RBP5.6□□□□□ -1.51
SYNE2-203ENST00000357395 EHBP1Q8NDI1 1231 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 ZBTB17Q13105 803 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 A0A1B0GUA9 196 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 CCDC112Q8NEF3 446 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 CEP89Q96ST8 783 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 TSPY4P0CV99 314 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 TSPY10P0CW01 314 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 NPHP1O15259 732 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 HOOK3Q86VS8 718 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 SMARCE1Q969G3 411 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-203ENST00000357395 TMF1P82094 1093 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 FMNL3Q8IVF7 1028 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 DDX49Q9Y6V7 483 aaKnown RBP5.6□□□□□ -1.51
SYNE2-203ENST00000357395 SHTN1A0MZ66 631 aa5.6□□□□□ -1.51
SYNE2-203ENST00000357395 TRDNQ13061 729 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 ZMYM3Q14202 1370 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 KIF15Q9NS87 1388 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 TRIM6-TRIM34B2RNG4 842 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 TRIM34Q9BYJ4 488 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 PPP1R1BQ9UD71 204 aaPredicted RBP5.59□□□□□ -1.51
SYNE2-203ENST00000357395 CCDC83Q8IWF9 413 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 SMC4Q9NTJ3 1288 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 DACH1Q9UI36 760 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 CCDC102AQ96A19 550 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 CLCN1P35523 988 aa5.59□□□□□ -1.51
SYNE2-203ENST00000357395 VGFO15240 615 aaPredicted RBP5.59□□□□□ -1.52
SYNE2-203ENST00000357395 CNTLNQ9NXG0 1405 aa5.59□□□□□ -1.52
SYNE2-203ENST00000357395 SEPT6Q14141 434 aa5.59□□□□□ -1.52
SYNE2-203ENST00000357395 RUFY2Q8WXA3 655 aa5.59□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC47Q96A33 483 aaKnown RBP5.59□□□□□ -1.52
SYNE2-203ENST00000357395 PLPPR3Q6T4P5 718 aa5.59□□□□□ -1.52
SYNE2-203ENST00000357395 SLMAPQ14BN4 828 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 KIF18AQ8NI77 898 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 PATL2C9JE40 543 aaKnown RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 TULP1O00294 542 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 770.6 ms