RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 ADAMTS8Q9UP79 889 aa15.75■□□□□ 0.11
SMARCAL1-201ENST00000357276 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
SMARCAL1-201ENST00000357276 CC2D1BQ5T0F9 858 aaKnown RBP15.74■□□□□ 0.11
SMARCAL1-201ENST00000357276 PANK3Q9H999 370 aa15.74■□□□□ 0.11
SMARCAL1-201ENST00000357276 NLRP1Q9C000 1473 aa15.74■□□□□ 0.11
SMARCAL1-201ENST00000357276 CCDC141Q6ZP82 1450 aa15.74■□□□□ 0.11
SMARCAL1-201ENST00000357276 ZNF777Q9ULD5 760 aaPredicted RBP15.73■□□□□ 0.11
SMARCAL1-201ENST00000357276 PLCH2O75038 1416 aa15.73■□□□□ 0.11
SMARCAL1-201ENST00000357276 MAGI2Q86UL8 1455 aa15.72■□□□□ 0.11
SMARCAL1-201ENST00000357276 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
SMARCAL1-201ENST00000357276 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
SMARCAL1-201ENST00000357276 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
SMARCAL1-201ENST00000357276 SLFN5Q08AF3 891 aa15.7■□□□□ 0.1
SMARCAL1-201ENST00000357276 IQGAP1P46940 1657 aa15.7■□□□□ 0.1
SMARCAL1-201ENST00000357276 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
SMARCAL1-201ENST00000357276 GOLGA2Q08379 1002 aa15.7■□□□□ 0.1
SMARCAL1-201ENST00000357276 ATP10AO60312 1499 aa15.7■□□□□ 0.1
SMARCAL1-201ENST00000357276 SYNMO15061 1565 aa15.69■□□□□ 0.1
SMARCAL1-201ENST00000357276 IQGAP3Q86VI3 1631 aa15.69■□□□□ 0.1
SMARCAL1-201ENST00000357276 PIK3C2GO75747 1445 aa15.69■□□□□ 0.1
SMARCAL1-201ENST00000357276 PLXNC1O60486 1568 aa15.69■□□□□ 0.1
SMARCAL1-201ENST00000357276 RIMBP3CA6NJZ7 1639 aa15.68■□□□□ 0.1
SMARCAL1-201ENST00000357276 RIMBP3BA6NNM3 1639 aa15.68■□□□□ 0.1
SMARCAL1-201ENST00000357276 RIMBP3Q9UFD9 1639 aa15.68■□□□□ 0.1
SMARCAL1-201ENST00000357276 NKTRP30414 1462 aaKnown RBP15.68■□□□□ 0.1
SMARCAL1-201ENST00000357276 PPP2R1AP30153 589 aa15.68■□□□□ 0.1
SMARCAL1-201ENST00000357276 ABCC1P33527 1531 aa15.68■□□□□ 0.1
SMARCAL1-201ENST00000357276 MYOM1P52179 1685 aa15.67■□□□□ 0.1
SMARCAL1-201ENST00000357276 EIF5BO60841 1220 aaKnown RBP15.67■□□□□ 0.1
SMARCAL1-201ENST00000357276 TMF1P82094 1093 aa15.67■□□□□ 0.1
SMARCAL1-201ENST00000357276 ANTXR1Q9H6X2 564 aa15.67■□□□□ 0.1
SMARCAL1-201ENST00000357276 POGKQ9P215 609 aa15.67■□□□□ 0.1
SMARCAL1-201ENST00000357276 ASXL2Q76L83 1435 aa15.66■□□□□ 0.1
SMARCAL1-201ENST00000357276 CFAP74Q9C0B2 1584 aa15.66■□□□□ 0.1
SMARCAL1-201ENST00000357276 RGS3P49796 1198 aa15.65■□□□□ 0.1
SMARCAL1-201ENST00000357276 AMER1Q5JTC6 1135 aaPredicted RBP15.65■□□□□ 0.1
SMARCAL1-201ENST00000357276 ZMYM3Q14202 1370 aa15.65■□□□□ 0.1
SMARCAL1-201ENST00000357276 TSPY4P0CV99 314 aa15.65■□□□□ 0.1
SMARCAL1-201ENST00000357276 TSPY10P0CW01 314 aa15.65■□□□□ 0.1
SMARCAL1-201ENST00000357276 RRAGDQ9NQL2 400 aaPredicted RBP15.65■□□□□ 0.1
SMARCAL1-201ENST00000357276 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
SMARCAL1-201ENST00000357276 SYCP2Q9BX26 1530 aa15.64■□□□□ 0.09
SMARCAL1-201ENST00000357276 ASXL1Q8IXJ9 1541 aa15.64■□□□□ 0.09
SMARCAL1-201ENST00000357276 IGHDP01880 384 aa15.63■□□□□ 0.09
SMARCAL1-201ENST00000357276 MADDQ8WXG6 1647 aa15.62■□□□□ 0.09
SMARCAL1-201ENST00000357276 NINLQ9Y2I6 1382 aa15.62■□□□□ 0.09
SMARCAL1-201ENST00000357276 SEC24BO95487 1268 aa15.62■□□□□ 0.09
SMARCAL1-201ENST00000357276 L1TD1Q5T7N2 865 aaKnown RBP15.62■□□□□ 0.09
SMARCAL1-201ENST00000357276 MAPK8IP3Q9UPT6 1336 aa15.62■□□□□ 0.09
SMARCAL1-201ENST00000357276 WDR43Q15061 677 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMARCAL1-201ENST00000357276 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
SMARCAL1-201ENST00000357276 GLI2P10070 1586 aa15.6■□□□□ 0.09
SMARCAL1-201ENST00000357276 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
SMARCAL1-201ENST00000357276 BECN1Q14457 450 aa15.6■□□□□ 0.09
SMARCAL1-201ENST00000357276 FSD2A1L4K1 749 aa15.59■□□□□ 0.09
SMARCAL1-201ENST00000357276 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
SMARCAL1-201ENST00000357276 CGNL1Q0VF96 1302 aa15.59■□□□□ 0.09
SMARCAL1-201ENST00000357276 BCAR3O75815 825 aa15.58■□□□□ 0.08
SMARCAL1-201ENST00000357276 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
SMARCAL1-201ENST00000357276 HNRNPMP52272 730 aaKnown RBP eCLIP15.58■□□□□ 0.08
SMARCAL1-201ENST00000357276 RTEL1-TNFRSF6BF6WH68 1400 aa15.57■□□□□ 0.08
SMARCAL1-201ENST00000357276 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
SMARCAL1-201ENST00000357276 KNSTRNQ9Y448 316 aa15.57■□□□□ 0.08
SMARCAL1-201ENST00000357276 SPHKAPQ2M3C7 1700 aa15.57■□□□□ 0.08
SMARCAL1-201ENST00000357276 E9PSI1 815 aa15.56■□□□□ 0.08
SMARCAL1-201ENST00000357276 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
SMARCAL1-201ENST00000357276 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
SMARCAL1-201ENST00000357276 MAP3K4Q9Y6R4 1608 aa15.55■□□□□ 0.08
SMARCAL1-201ENST00000357276 CLUAP1Q96AJ1 413 aa15.55■□□□□ 0.08
SMARCAL1-201ENST00000357276 TBC1D32Q96NH3 1257 aa15.55■□□□□ 0.08
SMARCAL1-201ENST00000357276 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
SMARCAL1-201ENST00000357276 DUOX2Q9NRD8 1548 aa15.55■□□□□ 0.08
SMARCAL1-201ENST00000357276 FANCAO15360 1455 aa15.55■□□□□ 0.08
SMARCAL1-201ENST00000357276 CEP152O94986 1710 aa15.54■□□□□ 0.08
SMARCAL1-201ENST00000357276 XRCC6P12956 609 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMARCAL1-201ENST00000357276 AAMPQ13685 434 aa15.53■□□□□ 0.08
SMARCAL1-201ENST00000357276 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
SMARCAL1-201ENST00000357276 CLCN1P35523 988 aa15.53■□□□□ 0.08
SMARCAL1-201ENST00000357276 ZFYVE16Q7Z3T8 1539 aa15.52■□□□□ 0.07
SMARCAL1-201ENST00000357276 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.07
SMARCAL1-201ENST00000357276 TBC1D2Q9BYX2 928 aa15.52■□□□□ 0.07
SMARCAL1-201ENST00000357276 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.07
SMARCAL1-201ENST00000357276 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.07
SMARCAL1-201ENST00000357276 APAF1O14727 1248 aa15.51■□□□□ 0.07
SMARCAL1-201ENST00000357276 SLKQ9H2G2 1235 aaPredicted RBP15.51■□□□□ 0.07
SMARCAL1-201ENST00000357276 SHPRHQ149N8 1683 aa15.5■□□□□ 0.07
SMARCAL1-201ENST00000357276 NEO1Q92859 1461 aa15.5■□□□□ 0.07
SMARCAL1-201ENST00000357276 CDCA8Q53HL2 280 aa15.49■□□□□ 0.07
SMARCAL1-201ENST00000357276 CCDC146Q8IYE0 955 aa15.49■□□□□ 0.07
SMARCAL1-201ENST00000357276 TRAPPC8Q9Y2L5 1435 aa15.48■□□□□ 0.07
SMARCAL1-201ENST00000357276 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
SMARCAL1-201ENST00000357276 DEPDC5O75140 1603 aa15.48■□□□□ 0.07
SMARCAL1-201ENST00000357276 GOLGA6L3A6NEY3 463 aa15.48■□□□□ 0.07
SMARCAL1-201ENST00000357276 MCM4P33991 863 aa15.48■□□□□ 0.07
SMARCAL1-201ENST00000357276 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
SMARCAL1-201ENST00000357276 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
SMARCAL1-201ENST00000357276 CD109Q6YHK3 1445 aa15.47■□□□□ 0.07
SMARCAL1-201ENST00000357276 PMFBP1Q8TBY8 1022 aa15.46■□□□□ 0.07
SMARCAL1-201ENST00000357276 PANK1Q8TE04 598 aa15.46■□□□□ 0.07
SMARCAL1-201ENST00000357276 IQSEC2Q5JU85 1478 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms