RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FGD1P98174 961 aa10.6□□□□□ -0.71
CDC42SE1-201ENST00000357235 PNNQ9H307 717 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-201ENST00000357235 A2MP01023 1474 aa10.59□□□□□ -0.71
CDC42SE1-201ENST00000357235 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-201ENST00000357235 COG6Q9Y2V7 657 aa10.59□□□□□ -0.71
CDC42SE1-201ENST00000357235 CEP170Q5SW79 1584 aa10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 KDM5DQ9BY66 1539 aa10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 PDE4CQ08493 712 aa10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 SLFN5Q08AF3 891 aa10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 PANK1Q8TE04 598 aa10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 IGHDP01880 384 aa10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 RRP7AQ9Y3A4 280 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-201ENST00000357235 CROCC2H7BZ55 1655 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 BCL2L13Q9BXK5 485 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 CCDC141Q6ZP82 1450 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 SHANK2Q9UPX8 1470 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 PTPRGP23470 1445 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 PLA2R1Q13018 1463 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 ABCC10Q5T3U5 1492 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 PLEKHH2Q8IVE3 1493 aa10.57□□□□□ -0.72
CDC42SE1-201ENST00000357235 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
CDC42SE1-201ENST00000357235 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
CDC42SE1-201ENST00000357235 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
CDC42SE1-201ENST00000357235 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
CDC42SE1-201ENST00000357235 SEC24BO95487 1268 aa10.55□□□□□ -0.72
CDC42SE1-201ENST00000357235 CLUAP1Q96AJ1 413 aa10.55□□□□□ -0.72
CDC42SE1-201ENST00000357235 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
CDC42SE1-201ENST00000357235 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
CDC42SE1-201ENST00000357235 GPRASP1Q5JY77 1395 aa10.55□□□□□ -0.72
CDC42SE1-201ENST00000357235 E9PCH4 1651 aa10.55□□□□□ -0.72
CDC42SE1-201ENST00000357235 TRPM1Q7Z4N2 1603 aa10.54□□□□□ -0.72
CDC42SE1-201ENST00000357235 ARHGAP5Q13017 1502 aa10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 POGKQ9P215 609 aa10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 RIMBP3CA6NJZ7 1639 aa10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 RIMBP3BA6NNM3 1639 aa10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 RIMBP3Q9UFD9 1639 aa10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 E9PSI1 815 aa10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 SENP3Q9H4L4 574 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
CDC42SE1-201ENST00000357235 ZNF521Q96K83 1311 aa10.52□□□□□ -0.72
CDC42SE1-201ENST00000357235 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.72
CDC42SE1-201ENST00000357235 BECN1Q14457 450 aa10.52□□□□□ -0.73
CDC42SE1-201ENST00000357235 ADCY10Q96PN6 1610 aa10.51□□□□□ -0.73
CDC42SE1-201ENST00000357235 ERCC6L2Q5T890 1561 aa10.51□□□□□ -0.73
CDC42SE1-201ENST00000357235 L1TD1Q5T7N2 865 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-201ENST00000357235 UPF2Q9HAU5 1272 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-201ENST00000357235 CLCN1P35523 988 aa10.51□□□□□ -0.73
CDC42SE1-201ENST00000357235 CFAP70Q5T0N1 1121 aa10.51□□□□□ -0.73
CDC42SE1-201ENST00000357235 GZF1Q9H116 711 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-201ENST00000357235 TNNQ9UQP3 1299 aa10.5□□□□□ -0.73
CDC42SE1-201ENST00000357235 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
CDC42SE1-201ENST00000357235 AFAP1Q8N556 730 aa10.5□□□□□ -0.73
CDC42SE1-201ENST00000357235 NKTRP30414 1462 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-201ENST00000357235 PRDM15P57071 1507 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE1-201ENST00000357235 CGNL1Q0VF96 1302 aa10.49□□□□□ -0.73
CDC42SE1-201ENST00000357235 SAMD9LQ8IVG5 1584 aa10.49□□□□□ -0.73
CDC42SE1-201ENST00000357235 WWC1Q8IX03 1113 aa10.49□□□□□ -0.73
CDC42SE1-201ENST00000357235 ABCA8O94911 1581 aa10.49□□□□□ -0.73
CDC42SE1-201ENST00000357235 CALD1Q05682 793 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-201ENST00000357235 INSRP06213 1382 aa10.48□□□□□ -0.73
CDC42SE1-201ENST00000357235 MORC1Q86VD1 984 aa10.48□□□□□ -0.73
CDC42SE1-201ENST00000357235 CARD14Q9BXL6 1004 aa10.47□□□□□ -0.73
CDC42SE1-201ENST00000357235 PDCL3Q9H2J4 239 aa10.47□□□□□ -0.73
CDC42SE1-201ENST00000357235 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-201ENST00000357235 USP19O94966 1318 aa10.47□□□□□ -0.73
CDC42SE1-201ENST00000357235 MAPK8IP3Q9UPT6 1336 aa10.47□□□□□ -0.73
CDC42SE1-201ENST00000357235 EIF3AQ14152 1382 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-201ENST00000357235 NPM1P06748 294 aaKnown RBP eCLIP10.46□□□□□ -0.73
CDC42SE1-201ENST00000357235 RLBP1P12271 317 aa10.46□□□□□ -0.73
CDC42SE1-201ENST00000357235 PDE3AQ14432 1141 aa10.46□□□□□ -0.73
CDC42SE1-201ENST00000357235 EFCAB2Q5VUJ9 269 aa10.46□□□□□ -0.73
CDC42SE1-201ENST00000357235 TRMT2AQ8IZ69 625 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-201ENST00000357235 PCDHB15Q9Y5E8 787 aa10.46□□□□□ -0.73
CDC42SE1-201ENST00000357235 ARHGEF5Q12774 1597 aa10.46□□□□□ -0.74
CDC42SE1-201ENST00000357235 KIF3BO15066 747 aa10.46□□□□□ -0.74
CDC42SE1-201ENST00000357235 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-201ENST00000357235 PRDM4Q9UKN5 801 aa10.46□□□□□ -0.74
CDC42SE1-201ENST00000357235 TRAK1Q9UPV9 953 aa10.46□□□□□ -0.74
CDC42SE1-201ENST00000357235 SPAG9O60271 1321 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-201ENST00000357235 TCP11L2Q8N4U5 519 aa10.45□□□□□ -0.74
CDC42SE1-201ENST00000357235 ASXL1Q8IXJ9 1541 aa10.45□□□□□ -0.74
CDC42SE1-201ENST00000357235 MFAP1P55081 439 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-201ENST00000357235 FTSJ3Q8IY81 847 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-201ENST00000357235 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
CDC42SE1-201ENST00000357235 SLC12A5Q9H2X9 1139 aa10.44□□□□□ -0.74
CDC42SE1-201ENST00000357235 SCAF11Q99590 1463 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-201ENST00000357235 RARSP54136 660 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-201ENST00000357235 PMFBP1Q8TBY8 1022 aa10.44□□□□□ -0.74
CDC42SE1-201ENST00000357235 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-201ENST00000357235 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
CDC42SE1-201ENST00000357235 PIK3C2GO75747 1445 aa10.43□□□□□ -0.74
CDC42SE1-201ENST00000357235 EIF2AK4Q9P2K8 1649 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-201ENST00000357235 TBC1D2Q9BYX2 928 aa10.43□□□□□ -0.74
CDC42SE1-201ENST00000357235 SHROOM2Q13796 1616 aa10.42□□□□□ -0.74
CDC42SE1-201ENST00000357235 U2AF1L5P0DN76 240 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-201ENST00000357235 U2AF1Q01081 240 aaKnown RBP eCLIP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms