RNA–Protein interactions for RNA: ENST00000356489.9

BCKDHB-202, Transcript of branched chain keto acid dehydrogenase E1 subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCKDHB, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHB-202ENST00000356489 RIMS2Q9UQ26 1411 aa34.39■■■■□ 3.1
BCKDHB-202ENST00000356489 ZNF326Q5BKZ1 582 aaKnown RBP34.37■■■■□ 3.09
BCKDHB-202ENST00000356489 RGL3Q3MIN7 710 aa34.35■■■■□ 3.09
BCKDHB-202ENST00000356489 SCAF11Q99590 1463 aaKnown RBP34.35■■■■□ 3.09
BCKDHB-202ENST00000356489 NEUROD1Q13562 356 aa34.34■■■■□ 3.09
BCKDHB-202ENST00000356489 LTKP29376 864 aa34.33■■■■□ 3.09
BCKDHB-202ENST00000356489 RPGRIP1LQ68CZ1 1315 aa34.31■■■■□ 3.08
BCKDHB-202ENST00000356489 ANKLE2Q86XL3 938 aa34.3■■■■□ 3.08
BCKDHB-202ENST00000356489 TXNDC2Q86VQ3 553 aa34.29■■■■□ 3.08
BCKDHB-202ENST00000356489 MED14O60244 1454 aa34.28■■■■□ 3.08
BCKDHB-202ENST00000356489 NCKAP5LQ9HCH0 1330 aa34.28■■■■□ 3.08
BCKDHB-202ENST00000356489 IQGAP1P46940 1657 aa34.28■■■■□ 3.08
BCKDHB-202ENST00000356489 NUTM2DQ5VT03 806 aaPredicted RBP34.27■■■■□ 3.08
BCKDHB-202ENST00000356489 EID1Q9Y6B2 187 aa34.27■■■■□ 3.08
BCKDHB-202ENST00000356489 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.25■■■■□ 3.07
BCKDHB-202ENST00000356489 MYOM2P54296 1465 aa34.24■■■■□ 3.07
BCKDHB-202ENST00000356489 NRXN3Q9Y4C0 1643 aa34.23■■■■□ 3.07
BCKDHB-202ENST00000356489 HDGFP51858 240 aaKnown RBP34.23■■■■□ 3.07
BCKDHB-202ENST00000356489 NPHP4O75161 1426 aaPredicted RBP34.21■■■■□ 3.07
BCKDHB-202ENST00000356489 PLEKHG1Q9ULL1 1385 aa34.2■■■■□ 3.07
BCKDHB-202ENST00000356489 NRXN1Q9ULB1 1477 aa34.2■■■■□ 3.07
BCKDHB-202ENST00000356489 PPP1R15AO75807 674 aaPredicted RBP34.2■■■■□ 3.06
BCKDHB-202ENST00000356489 SETBP1Q9Y6X0 1596 aa34.19■■■■□ 3.06
BCKDHB-202ENST00000356489 L3MBTL2Q969R5 705 aa34.19■■■■□ 3.06
BCKDHB-202ENST00000356489 VGFO15240 615 aaPredicted RBP34.18■■■■□ 3.06
BCKDHB-202ENST00000356489 DCAF11Q8TEB1 546 aa34.18■■■■□ 3.06
BCKDHB-202ENST00000356489 TONSLQ96HA7 1378 aa34.17■■■■□ 3.06
BCKDHB-202ENST00000356489 ADGRF5Q8IZF2 1346 aa34.16■■■■□ 3.06
BCKDHB-202ENST00000356489 SETD1AO15047 1707 aaKnown RBP34.15■■■■□ 3.06
BCKDHB-202ENST00000356489 PIK3C2GO75747 1445 aa34.13■■■■□ 3.05
BCKDHB-202ENST00000356489 ADAMTS13Q76LX8 1427 aa34.11■■■■□ 3.05
BCKDHB-202ENST00000356489 STAC3Q96MF2 364 aa34.11■■■■□ 3.05
BCKDHB-202ENST00000356489 SENP3Q9H4L4 574 aaPredicted RBP34.1■■■■□ 3.05
BCKDHB-202ENST00000356489 KDM2AQ9Y2K7 1162 aa34.1■■■■□ 3.05
BCKDHB-202ENST00000356489 DIP2AQ14689 1571 aa34.1■■■■□ 3.05
BCKDHB-202ENST00000356489 ALKQ9UM73 1620 aa34.07■■■■□ 3.04
BCKDHB-202ENST00000356489 LAMC1P11047 1609 aa34.07■■■■□ 3.04
BCKDHB-202ENST00000356489 PRAG1Q86YV5 1406 aa34.05■■■■□ 3.04
BCKDHB-202ENST00000356489 TIMELESSQ9UNS1 1208 aa34.04■■■■□ 3.04
BCKDHB-202ENST00000356489 DMRT2Q9Y5R5 561 aa34.04■■■■□ 3.04
BCKDHB-202ENST00000356489 KIAA1210Q9ULL0 1709 aa34.03■■■■□ 3.04
BCKDHB-202ENST00000356489 BCANQ96GW7 911 aa34.02■■■■□ 3.04
BCKDHB-202ENST00000356489 SLC26A8Q96RN1 970 aa34.02■■■■□ 3.04
BCKDHB-202ENST00000356489 CHD2O14647 1828 aaKnown RBP34■■■■□ 3.03
BCKDHB-202ENST00000356489 TRPM1Q7Z4N2 1603 aa33.98■■■■□ 3.03
BCKDHB-202ENST00000356489 TBX22Q9Y458 520 aa33.98■■■■□ 3.03
BCKDHB-202ENST00000356489 ASXL1Q8IXJ9 1541 aa33.97■■■■□ 3.03
BCKDHB-202ENST00000356489 STRCP1A6NGW2 1772 aa33.97■■■■□ 3.03
BCKDHB-202ENST00000356489 C14orf93Q9H972 538 aaKnown RBP33.94■■■■□ 3.02
BCKDHB-202ENST00000356489 METP08581 1390 aa33.93■■■■□ 3.02
BCKDHB-202ENST00000356489 CFAP70Q5T0N1 1121 aa33.93■■■■□ 3.02
BCKDHB-202ENST00000356489 NBPF8Q3BBV2 869 aa33.92■■■■□ 3.02
BCKDHB-202ENST00000356489 ADGRB1O14514 1584 aa33.91■■■■□ 3.02
BCKDHB-202ENST00000356489 NWD1Q149M9 1564 aa33.91■■■■□ 3.02
BCKDHB-202ENST00000356489 XRN1Q8IZH2 1706 aaKnown RBP33.9■■■■□ 3.02
BCKDHB-202ENST00000356489 PIK3R4Q99570 1358 aa33.89■■■■□ 3.02
BCKDHB-202ENST00000356489 PTPRUQ92729 1446 aa33.87■■■■□ 3.01
BCKDHB-202ENST00000356489 KNDC1Q76NI1 1749 aa33.84■■■■□ 3.01
BCKDHB-202ENST00000356489 ZNF335Q9H4Z2 1342 aaPredicted RBP33.84■■■■□ 3.01
BCKDHB-202ENST00000356489 RALGAPBQ86X10 1494 aa33.83■■■■□ 3.01
BCKDHB-202ENST00000356489 TMEM132EQ6IEE7 984 aa33.82■■■■□ 3
BCKDHB-202ENST00000356489 LTBP4Q8N2S1 1624 aa33.8■■■■□ 3
BCKDHB-202ENST00000356489 NBPF1Q3BBV0 1214 aa33.79■■■■□ 3
BCKDHB-202ENST00000356489 YTHDC2Q9H6S0 1430 aaKnown RBP33.78■■■■□ 3
BCKDHB-202ENST00000356489 KCNA6P17658 529 aa33.78■■■■□ 3
BCKDHB-202ENST00000356489 NKTRP30414 1462 aaKnown RBP33.76■■■■□ 3
BCKDHB-202ENST00000356489 LRPPRCP42704 1394 aaKnown RBP33.75■■■□□ 2.99
BCKDHB-202ENST00000356489 AMOTL2Q9Y2J4 779 aa33.75■■■□□ 2.99
BCKDHB-202ENST00000356489 CPS1P31327 1500 aa33.75■■■□□ 2.99
BCKDHB-202ENST00000356489 TECPR2O15040 1411 aa33.74■■■□□ 2.99
BCKDHB-202ENST00000356489 ROCK2O75116 1388 aaKnown RBP33.74■■■□□ 2.99
BCKDHB-202ENST00000356489 GPRASP1Q5JY77 1395 aa33.74■■■□□ 2.99
BCKDHB-202ENST00000356489 XIRP1Q702N8 1843 aaKnown RBP33.74■■■□□ 2.99
BCKDHB-202ENST00000356489 ARHGEF28Q8N1W1 1705 aaKnown RBP33.73■■■□□ 2.99
BCKDHB-202ENST00000356489 ABCC11Q96J66 1382 aa33.71■■■□□ 2.99
BCKDHB-202ENST00000356489 PTCH1Q13635 1447 aa33.71■■■□□ 2.99
BCKDHB-202ENST00000356489 DLC1Q96QB1 1528 aa33.69■■■□□ 2.98
BCKDHB-202ENST00000356489 STK26Q9P289 416 aa33.68■■■□□ 2.98
BCKDHB-202ENST00000356489 ROBO2Q9HCK4 1378 aa33.67■■■□□ 2.98
BCKDHB-202ENST00000356489 LRRC7Q96NW7 1537 aa33.66■■■□□ 2.98
BCKDHB-202ENST00000356489 TRAK1Q9UPV9 953 aa33.61■■■□□ 2.97
BCKDHB-202ENST00000356489 FAM135BQ49AJ0 1406 aa33.6■■■□□ 2.97
BCKDHB-202ENST00000356489 CARD11Q9BXL7 1154 aa33.6■■■□□ 2.97
BCKDHB-202ENST00000356489 NALCNQ8IZF0 1738 aa33.59■■■□□ 2.97
BCKDHB-202ENST00000356489 TMEM94Q12767 1356 aa33.57■■■□□ 2.96
BCKDHB-202ENST00000356489 PROSER2Q86WR7 435 aaPredicted RBP33.57■■■□□ 2.96
BCKDHB-202ENST00000356489 SIRT1Q96EB6 747 aa33.57■■■□□ 2.96
BCKDHB-202ENST00000356489 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.57■■■□□ 2.96
BCKDHB-202ENST00000356489 PLEKHH1Q9ULM0 1364 aa33.56■■■□□ 2.96
BCKDHB-202ENST00000356489 RBM33Q96EV2 1170 aaKnown RBP33.55■■■□□ 2.96
BCKDHB-202ENST00000356489 QRICH2Q9H0J4 1663 aa33.54■■■□□ 2.96
BCKDHB-202ENST00000356489 WAPLQ7Z5K2 1190 aa33.53■■■□□ 2.96
BCKDHB-202ENST00000356489 NCOA3Q9Y6Q9 1424 aa33.52■■■□□ 2.96
BCKDHB-202ENST00000356489 ZEB1P37275 1124 aaPredicted RBP33.52■■■□□ 2.96
BCKDHB-202ENST00000356489 PRAM1Q96QH2 718 aa33.52■■■□□ 2.96
BCKDHB-202ENST00000356489 EIF3AQ14152 1382 aaKnown RBP33.48■■■□□ 2.95
BCKDHB-202ENST00000356489 ADGRL3Q9HAR2 1447 aa33.48■■■□□ 2.95
BCKDHB-202ENST00000356489 USP47Q96K76 1375 aa33.47■■■□□ 2.95
BCKDHB-202ENST00000356489 ADGRB2O60241 1585 aa33.46■■■□□ 2.95
BCKDHB-202ENST00000356489 IQSEC2Q5JU85 1478 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms